RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 PHF20L1A8MW92 1017 aa19.5■□□□□ 0.71
HDDC2-201ENST00000318787 PPP4CP60510 307 aa19.5■□□□□ 0.71
HDDC2-201ENST00000318787 NOL9Q5SY16 702 aaKnown RBP19.5■□□□□ 0.71
HDDC2-201ENST00000318787 PAG1Q9NWQ8 432 aa19.5■□□□□ 0.71
HDDC2-201ENST00000318787 PALD1Q9ULE6 856 aa19.5■□□□□ 0.71
HDDC2-201ENST00000318787 ZHX2Q9Y6X8 837 aa19.5■□□□□ 0.71
HDDC2-201ENST00000318787 PTPRFP10586 1907 aa19.5■□□□□ 0.71
HDDC2-201ENST00000318787 COL2A1P02458 1487 aaPredicted RBP19.49■□□□□ 0.71
HDDC2-201ENST00000318787 CCDC84Q86UT8 332 aaPredicted RBP19.49■□□□□ 0.71
HDDC2-201ENST00000318787 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.49■□□□□ 0.71
HDDC2-201ENST00000318787 DCTPP1Q9H773 170 aa19.49■□□□□ 0.71
HDDC2-201ENST00000318787 ZFYVE28Q9HCC9 887 aa19.49■□□□□ 0.71
HDDC2-201ENST00000318787 MAGEB6P1A0A0J9YX57 407 aa19.48■□□□□ 0.71
HDDC2-201ENST00000318787 BTBD19C9JJ37 291 aa19.48■□□□□ 0.71
HDDC2-201ENST00000318787 PDE6AP16499 860 aa19.48■□□□□ 0.71
HDDC2-201ENST00000318787 ATP5JP18859 108 aa19.48■□□□□ 0.71
HDDC2-201ENST00000318787 GPATCH3Q96I76 525 aa19.48■□□□□ 0.71
HDDC2-201ENST00000318787 CFHR5Q9BXR6 569 aa19.48■□□□□ 0.71
HDDC2-201ENST00000318787 DHX36Q9H2U1 1008 aaKnown RBP19.48■□□□□ 0.71
HDDC2-201ENST00000318787 PI4KBQ9UBF8 816 aa19.48■□□□□ 0.71
HDDC2-201ENST00000318787 ZNF532Q9HCE3 1301 aa19.48■□□□□ 0.71
HDDC2-201ENST00000318787 CTNND1O60716 968 aaKnown RBP19.47■□□□□ 0.71
HDDC2-201ENST00000318787 IGSF3O75054 1194 aa19.47■□□□□ 0.71
HDDC2-201ENST00000318787 ECM2O94769 699 aaPredicted RBP19.47■□□□□ 0.71
HDDC2-201ENST00000318787 HLA-DOAP06340 250 aa19.47■□□□□ 0.71
HDDC2-201ENST00000318787 PTPRAP18433 802 aa19.47■□□□□ 0.71
HDDC2-201ENST00000318787 TSHZ3Q63HK5 1081 aa19.47■□□□□ 0.71
HDDC2-201ENST00000318787 GADL1Q6ZQY3 521 aa19.47■□□□□ 0.71
HDDC2-201ENST00000318787 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
HDDC2-201ENST00000318787 TRIM75PA6NK02 468 aa19.46■□□□□ 0.71
HDDC2-201ENST00000318787 CD99L2Q8TCZ2 262 aa19.46■□□□□ 0.71
HDDC2-201ENST00000318787 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.46■□□□□ 0.71
HDDC2-201ENST00000318787 MYH8P13535 1937 aa19.46■□□□□ 0.71
HDDC2-201ENST00000318787 BAZ2AQ9UIF9 1905 aaKnown RBP19.46■□□□□ 0.71
HDDC2-201ENST00000318787 TBC1D12O60347 775 aa19.45■□□□□ 0.7
HDDC2-201ENST00000318787 MAP3K10Q02779 954 aa19.45■□□□□ 0.7
HDDC2-201ENST00000318787 SLFNL1Q499Z3 407 aa19.45■□□□□ 0.7
HDDC2-201ENST00000318787 CERS3Q8IU89 383 aa19.45■□□□□ 0.7
HDDC2-201ENST00000318787 HAUS7Q99871 368 aa19.45■□□□□ 0.7
HDDC2-201ENST00000318787 ECHDC1Q9NTX5 307 aa19.45■□□□□ 0.7
HDDC2-201ENST00000318787 HERC5Q9UII4 1024 aaKnown RBP19.45■□□□□ 0.7
HDDC2-201ENST00000318787 TRIM17Q9Y577 477 aa19.45■□□□□ 0.7
HDDC2-201ENST00000318787 ZSWIM8A7E2V4 1837 aa19.45■□□□□ 0.7
HDDC2-201ENST00000318787 PDHXO00330 501 aa19.44■□□□□ 0.7
HDDC2-201ENST00000318787 SP3Q02447 781 aa19.44■□□□□ 0.7
HDDC2-201ENST00000318787 NOM1Q5C9Z4 860 aaKnown RBP19.44■□□□□ 0.7
HDDC2-201ENST00000318787 ERO1AQ96HE7 468 aa19.44■□□□□ 0.7
HDDC2-201ENST00000318787 KCNH4Q9UQ05 1017 aa19.44■□□□□ 0.7
HDDC2-201ENST00000318787 GDF11O95390 407 aa19.44■□□□□ 0.7
HDDC2-201ENST00000318787 CAP2P40123 477 aa19.44■□□□□ 0.7
HDDC2-201ENST00000318787 CRNKL1Q9BZJ0 848 aaKnown RBP19.44■□□□□ 0.7
HDDC2-201ENST00000318787 DDX60LQ5H9U9 1706 aaKnown RBP19.43■□□□□ 0.7
HDDC2-201ENST00000318787 CHGBP05060 677 aa19.43■□□□□ 0.7
HDDC2-201ENST00000318787 RRP1BQ14684 758 aaKnown RBP19.43■□□□□ 0.7
HDDC2-201ENST00000318787 LCORLQ8N3X6 602 aa19.43■□□□□ 0.7
HDDC2-201ENST00000318787 SDR42E1Q8WUS8 393 aa19.43■□□□□ 0.7
HDDC2-201ENST00000318787 RIOK1Q9BRS2 568 aaKnown RBP19.43■□□□□ 0.7
HDDC2-201ENST00000318787 ARMT1Q9H993 441 aa19.43■□□□□ 0.7
HDDC2-201ENST00000318787 AFG3L2Q9Y4W6 797 aa19.43■□□□□ 0.7
HDDC2-201ENST00000318787 CXCL11O14625 94 aa19.42■□□□□ 0.7
HDDC2-201ENST00000318787 MBD4O95243 580 aa19.42■□□□□ 0.7
HDDC2-201ENST00000318787 POLR3DP05423 398 aaPredicted RBP19.42■□□□□ 0.7
HDDC2-201ENST00000318787 ADD2P35612 726 aa19.42■□□□□ 0.7
HDDC2-201ENST00000318787 TMED8Q6PL24 325 aaPredicted RBP19.42■□□□□ 0.7
HDDC2-201ENST00000318787 ANKRD23Q86SG2 305 aa19.42■□□□□ 0.7
HDDC2-201ENST00000318787 FOXP4Q8IVH2 680 aaPredicted RBP19.42■□□□□ 0.7
HDDC2-201ENST00000318787 DNAJC18Q9H819 358 aa19.42■□□□□ 0.7
HDDC2-201ENST00000318787 TCRBV5S4A2TA0A5A2 114 aa19.41■□□□□ 0.7
HDDC2-201ENST00000318787 SPP2Q13103 211 aa19.41■□□□□ 0.7
HDDC2-201ENST00000318787 PKN2Q16513 984 aaKnown RBP19.41■□□□□ 0.7
HDDC2-201ENST00000318787 ANKRD45Q5TZF3 282 aa19.41■□□□□ 0.7
HDDC2-201ENST00000318787 FASTKD5Q7L8L6 764 aaKnown RBP19.41■□□□□ 0.7
HDDC2-201ENST00000318787 MCM9Q9NXL9 1143 aa19.41■□□□□ 0.7
HDDC2-201ENST00000318787 CPA4Q9UI42 421 aa19.41■□□□□ 0.7
HDDC2-201ENST00000318787 SUPT16HQ9Y5B9 1047 aaKnown RBP19.41■□□□□ 0.7
HDDC2-201ENST00000318787 A0A0G2JLL6 359 aaPredicted RBP19.4■□□□□ 0.7
HDDC2-201ENST00000318787 USP17L5A8MUK1 530 aa19.4■□□□□ 0.7
HDDC2-201ENST00000318787 TLR2O60603 784 aa19.4■□□□□ 0.7
HDDC2-201ENST00000318787 SHROOM1Q2M3G4 852 aaPredicted RBP19.4■□□□□ 0.7
HDDC2-201ENST00000318787 ZSCAN25Q6NSZ9 544 aa19.4■□□□□ 0.7
HDDC2-201ENST00000318787 OTOP1Q7RTM1 612 aa19.4■□□□□ 0.7
HDDC2-201ENST00000318787 PRRT2Q7Z6L0 340 aaPredicted RBP19.4■□□□□ 0.7
HDDC2-201ENST00000318787 TTC6Q86TZ1 520 aa19.4■□□□□ 0.7
HDDC2-201ENST00000318787 EFCC1Q9HA90 598 aa19.4■□□□□ 0.7
HDDC2-201ENST00000318787 AS3MTQ9HBK9 375 aa19.4■□□□□ 0.7
HDDC2-201ENST00000318787 ZCCHC17Q9NP64 241 aaKnown RBP19.4■□□□□ 0.7
HDDC2-201ENST00000318787 HPS5Q9UPZ3 1129 aa19.4■□□□□ 0.7
HDDC2-201ENST00000318787 LOC285556D6RIA3 1793 aa19.4■□□□□ 0.7
HDDC2-201ENST00000318787 CYP2C8P10632 490 aa19.39■□□□□ 0.69
HDDC2-201ENST00000318787 MOGSQ13724 837 aa19.39■□□□□ 0.69
HDDC2-201ENST00000318787 KIF22Q14807 665 aa19.39■□□□□ 0.69
HDDC2-201ENST00000318787 FBXO46Q6PJ61 603 aaPredicted RBP19.39■□□□□ 0.69
HDDC2-201ENST00000318787 ZNF280CQ8ND82 737 aa19.39■□□□□ 0.69
HDDC2-201ENST00000318787 EXOC6Q8TAG9 804 aa19.39■□□□□ 0.69
HDDC2-201ENST00000318787 OTUD7AQ8TE49 926 aaPredicted RBP19.39■□□□□ 0.69
HDDC2-201ENST00000318787 PARK7Q99497 189 aaKnown RBP19.39■□□□□ 0.69
HDDC2-201ENST00000318787 SERPINB13Q9UIV8 391 aa19.39■□□□□ 0.69
HDDC2-201ENST00000318787 MGAMO43451 1857 aa19.38■□□□□ 0.69
HDDC2-201ENST00000318787 ASNSP08243 561 aa19.38■□□□□ 0.69
HDDC2-201ENST00000318787 PLCD1P51178 756 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms