RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 ZNF654Q8IZM8 581 aa23.85■■□□□ 1.41
TTC39C-202ENST00000317571 TOB1P50616 345 aaPredicted RBP23.85■■□□□ 1.41
TTC39C-202ENST00000317571 FBXO33Q7Z6M2 555 aa23.85■■□□□ 1.41
TTC39C-202ENST00000317571 GNL3LQ9NVN8 582 aaKnown RBP23.85■■□□□ 1.41
TTC39C-202ENST00000317571 NARFQ9UHQ1 456 aa23.85■■□□□ 1.41
TTC39C-202ENST00000317571 BECN2A8MW95 431 aa23.84■■□□□ 1.41
TTC39C-202ENST00000317571 MMP1P03956 469 aa23.84■■□□□ 1.41
TTC39C-202ENST00000317571 GNL2Q13823 731 aaKnown RBP23.84■■□□□ 1.41
TTC39C-202ENST00000317571 MRFAP1L1Q96HT8 127 aa23.84■■□□□ 1.41
TTC39C-202ENST00000317571 TNKSO95271 1327 aa23.84■■□□□ 1.41
TTC39C-202ENST00000317571 DYNC1I1O14576 645 aa23.84■■□□□ 1.41
TTC39C-202ENST00000317571 CRACR2BQ8N4Y2 399 aaPredicted RBP23.84■■□□□ 1.41
TTC39C-202ENST00000317571 MYH13Q9UKX3 1938 aa23.84■■□□□ 1.41
TTC39C-202ENST00000317571 SLC3A2P08195 630 aaKnown RBP23.83■■□□□ 1.41
TTC39C-202ENST00000317571 GTF2E1P29083 439 aaPredicted RBP23.83■■□□□ 1.41
TTC39C-202ENST00000317571 TRIM29Q14134 588 aa23.83■■□□□ 1.41
TTC39C-202ENST00000317571 CAVIN4Q5BKX8 364 aa23.83■■□□□ 1.41
TTC39C-202ENST00000317571 NUP133Q8WUM0 1156 aa23.83■■□□□ 1.41
TTC39C-202ENST00000317571 RNF41Q9H4P4 317 aaPredicted RBP23.83■■□□□ 1.41
TTC39C-202ENST00000317571 SART3Q15020 963 aaKnown RBP23.83■■□□□ 1.41
TTC39C-202ENST00000317571 NOSTRINQ8IVI9 506 aa23.83■■□□□ 1.41
TTC39C-202ENST00000317571 FANCBQ8NB91 859 aa23.83■■□□□ 1.41
TTC39C-202ENST00000317571 MTA3Q9BTC8 594 aa23.83■■□□□ 1.41
TTC39C-202ENST00000317571 TFCP2L1Q9NZI6 479 aa23.83■■□□□ 1.41
TTC39C-202ENST00000317571 TNRC6CQ9HCJ0 1690 aaKnown RBP23.82■■□□□ 1.4
TTC39C-202ENST00000317571 FAM237AA0A1B0GTK4 181 aa23.82■■□□□ 1.4
TTC39C-202ENST00000317571 PRDM1O75626 825 aa23.82■■□□□ 1.4
TTC39C-202ENST00000317571 RPS6KA4O75676 772 aa23.82■■□□□ 1.4
TTC39C-202ENST00000317571 DIS3L2Q8IYB7 885 aaKnown RBP23.82■■□□□ 1.4
TTC39C-202ENST00000317571 NGLY1Q96IV0 654 aa23.82■■□□□ 1.4
TTC39C-202ENST00000317571 GNPATO15228 680 aa23.82■■□□□ 1.4
TTC39C-202ENST00000317571 RPS8P62241 208 aaKnown RBP23.82■■□□□ 1.4
TTC39C-202ENST00000317571 RESP18Q5W5W9 173 aa23.82■■□□□ 1.4
TTC39C-202ENST00000317571 ENAHQ8N8S7 591 aaPredicted RBP23.82■■□□□ 1.4
TTC39C-202ENST00000317571 NSUN4Q96CB9 384 aaKnown RBP23.82■■□□□ 1.4
TTC39C-202ENST00000317571 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.82■■□□□ 1.4
TTC39C-202ENST00000317571 MYH6P13533 1939 aa23.82■■□□□ 1.4
TTC39C-202ENST00000317571 SYKP43405 635 aa23.81■■□□□ 1.4
TTC39C-202ENST00000317571 GRIN1Q05586 938 aa23.81■■□□□ 1.4
TTC39C-202ENST00000317571 NR5A1Q13285 461 aa23.81■■□□□ 1.4
TTC39C-202ENST00000317571 TXNRD3Q86VQ6 643 aa23.81■■□□□ 1.4
TTC39C-202ENST00000317571 OXER1Q8TDS5 423 aa23.81■■□□□ 1.4
TTC39C-202ENST00000317571 ERICH2A1L162 156 aa23.81■■□□□ 1.4
TTC39C-202ENST00000317571 ISM2Q6H9L7 571 aa23.81■■□□□ 1.4
TTC39C-202ENST00000317571 UBAC1Q9BSL1 405 aa23.81■■□□□ 1.4
TTC39C-202ENST00000317571 NLRP12P59046 1061 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 NCAPHQ15003 741 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 RC3H1Q5TC82 1133 aaKnown RBP23.8■■□□□ 1.4
TTC39C-202ENST00000317571 CTR9Q6PD62 1173 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 NBPF5PQ86XG9 351 aaPredicted RBP23.8■■□□□ 1.4
TTC39C-202ENST00000317571 MYRIPQ8NFW9 859 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 TM4SF1P30408 202 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 MECOMQ03112 1051 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 ESR2Q92731 530 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 TIGD1Q96MW7 591 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 SETDB2Q96T68 719 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 BRIP1Q9BX63 1249 aa23.8■■□□□ 1.4
TTC39C-202ENST00000317571 DLEC1Q9Y238 1755 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 RGL2O15211 777 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 DEXIO95424 95 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 SPECC1Q5M775 1068 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 BPIFA3Q9BQP9 254 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 NHSQ6T4R5 1651 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 PRDX5P30044 214 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 RCAN1P53805 252 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 FUT2Q10981 343 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 TRIM22Q8IYM9 498 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 TMTC2Q8N394 836 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 WASF1Q92558 559 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 NLRP3Q96P20 1036 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 TUBE1Q9UJT0 475 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 JAG2Q9Y219 1238 aa23.79■■□□□ 1.4
TTC39C-202ENST00000317571 IRS2Q9Y4H2 1338 aa23.78■■□□□ 1.4
TTC39C-202ENST00000317571 FGRP09769 529 aa23.78■■□□□ 1.4
TTC39C-202ENST00000317571 RBM6P78332 1123 aaKnown RBP23.78■■□□□ 1.4
TTC39C-202ENST00000317571 PNOCQ13519 176 aa23.78■■□□□ 1.4
TTC39C-202ENST00000317571 METTL16Q86W50 562 aaKnown RBP23.78■■□□□ 1.4
TTC39C-202ENST00000317571 TSC1Q92574 1164 aa23.78■■□□□ 1.4
TTC39C-202ENST00000317571 ZSCAN10Q96SZ4 725 aaPredicted RBP23.78■■□□□ 1.4
TTC39C-202ENST00000317571 NAT10Q9H0A0 1025 aaKnown RBP23.78■■□□□ 1.4
TTC39C-202ENST00000317571 TAF1LQ8IZX4 1826 aa23.78■■□□□ 1.4
TTC39C-202ENST00000317571 TOM1O60784 492 aa23.78■■□□□ 1.4
TTC39C-202ENST00000317571 LONRF3Q496Y0 759 aa23.78■■□□□ 1.4
TTC39C-202ENST00000317571 JMYQ8N9B5 988 aa23.78■■□□□ 1.4
TTC39C-202ENST00000317571 HSD3B7Q9H2F3 369 aa23.78■■□□□ 1.4
TTC39C-202ENST00000317571 THSD7AQ9UPZ6 1657 aa23.77■■□□□ 1.4
TTC39C-202ENST00000317571 hCG_1642624A0A1W2PR95 340 aa23.77■■□□□ 1.4
TTC39C-202ENST00000317571 USP17L12C9JPN9 530 aa23.77■■□□□ 1.4
TTC39C-202ENST00000317571 USP17L21D6R901 530 aa23.77■■□□□ 1.4
TTC39C-202ENST00000317571 CUTAO60888 179 aa23.77■■□□□ 1.4
TTC39C-202ENST00000317571 PKN1Q16512 942 aa23.77■■□□□ 1.4
TTC39C-202ENST00000317571 FOXP4Q8IVH2 680 aaPredicted RBP23.77■■□□□ 1.4
TTC39C-202ENST00000317571 LRRC8AQ8IWT6 810 aa23.77■■□□□ 1.4
TTC39C-202ENST00000317571 ARHGEF1Q92888 912 aaKnown RBP23.77■■□□□ 1.4
TTC39C-202ENST00000317571 NYXQ9GZU5 481 aa23.77■■□□□ 1.4
TTC39C-202ENST00000317571 PCDHB6Q9Y5E3 794 aa23.77■■□□□ 1.4
TTC39C-202ENST00000317571 FAM205CA6NFA0 338 aa23.76■■□□□ 1.39
TTC39C-202ENST00000317571 FOXN1O15353 648 aa23.76■■□□□ 1.39
TTC39C-202ENST00000317571 PRIMPOLQ96LW4 560 aa23.76■■□□□ 1.39
TTC39C-202ENST00000317571 FOXP1Q9H334 677 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms