RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 AIFM3Q96NN9 605 aa22.55■■□□□ 1.2
AP3S1-201ENST00000316788 SENP2Q9HC62 589 aa22.55■■□□□ 1.2
AP3S1-201ENST00000316788 BCORQ6W2J9 1755 aa22.55■■□□□ 1.2
AP3S1-201ENST00000316788 CCDC196A0A1B0GTZ2 297 aa22.54■■□□□ 1.2
AP3S1-201ENST00000316788 PPP2R5BQ15173 497 aa22.54■■□□□ 1.2
AP3S1-201ENST00000316788 LINC00116Q8NCU8 138 aa22.54■■□□□ 1.2
AP3S1-201ENST00000316788 HELBQ8NG08 1087 aaPredicted RBP22.54■■□□□ 1.2
AP3S1-201ENST00000316788 PHKBQ93100 1093 aa22.54■■□□□ 1.2
AP3S1-201ENST00000316788 C16orf45Q96MC5 204 aaPredicted RBP22.54■■□□□ 1.2
AP3S1-201ENST00000316788 ARMT1Q9H993 441 aa22.54■■□□□ 1.2
AP3S1-201ENST00000316788 MYO5AQ9Y4I1 1855 aaKnown RBP22.54■■□□□ 1.2
AP3S1-201ENST00000316788 NTSR2O95665 410 aa22.54■■□□□ 1.2
AP3S1-201ENST00000316788 CDC5LQ99459 802 aaKnown RBP22.54■■□□□ 1.2
AP3S1-201ENST00000316788 ANAPC4Q9UJX5 808 aa22.54■■□□□ 1.2
AP3S1-201ENST00000316788 BAG6P46379 1132 aa22.53■■□□□ 1.2
AP3S1-201ENST00000316788 SAFBQ15424 915 aaKnown RBP eCLIP22.53■■□□□ 1.2
AP3S1-201ENST00000316788 NOSTRINQ8IVI9 506 aa22.53■■□□□ 1.2
AP3S1-201ENST00000316788 FOXP1Q9H334 677 aaPredicted RBP22.53■■□□□ 1.2
AP3S1-201ENST00000316788 A0A087WWV3 80 aa22.52■■□□□ 1.2
AP3S1-201ENST00000316788 MMP1P03956 469 aa22.52■■□□□ 1.2
AP3S1-201ENST00000316788 CRKLP46109 303 aaKnown RBP22.52■■□□□ 1.2
AP3S1-201ENST00000316788 FILIP1Q7Z7B0 1213 aa22.52■■□□□ 1.2
AP3S1-201ENST00000316788 TRIM22Q8IYM9 498 aa22.52■■□□□ 1.2
AP3S1-201ENST00000316788 ERCC4Q92889 916 aaPredicted RBP22.52■■□□□ 1.2
AP3S1-201ENST00000316788 ZNF804BA4D1E1 1349 aa22.52■■□□□ 1.2
AP3S1-201ENST00000316788 RGL2O15211 777 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 TUBB4AP04350 444 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 RXRAP19793 462 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 MARCKSP29966 332 aaPredicted RBP22.51■■□□□ 1.19
AP3S1-201ENST00000316788 CTDSPL2Q05D32 466 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 RTN1Q16799 776 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 CEP135Q66GS9 1140 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 SMIM5Q71RC9 77 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 SLC26A6Q9BXS9 759 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 TACC3Q9Y6A5 838 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 SLC4A4Q9Y6R1 1079 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 DEXIO95424 95 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 TDO2P48775 406 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 ARID5BQ14865 1188 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 WTAPQ15007 396 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 CCDC125Q86Z20 511 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 CCAR2Q8N163 923 aaKnown RBP22.51■■□□□ 1.19
AP3S1-201ENST00000316788 LCORLQ8N3X6 602 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 KRI1Q8N9T8 703 aaKnown RBP22.51■■□□□ 1.19
AP3S1-201ENST00000316788 CCDC112Q8NEF3 446 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 XPO4Q9C0E2 1151 aaKnown RBP22.51■■□□□ 1.19
AP3S1-201ENST00000316788 SEC31BQ9NQW1 1179 aa22.51■■□□□ 1.19
AP3S1-201ENST00000316788 HOOK1Q9UJC3 728 aaKnown RBP22.51■■□□□ 1.19
AP3S1-201ENST00000316788 CHD4Q14839 1912 aa22.5■■□□□ 1.19
AP3S1-201ENST00000316788 ERICH2A1L162 156 aa22.5■■□□□ 1.19
AP3S1-201ENST00000316788 CBFA2T2O43439 604 aa22.5■■□□□ 1.19
AP3S1-201ENST00000316788 NRDCO43847 1150 aa22.5■■□□□ 1.19
AP3S1-201ENST00000316788 RILPL1Q5EBL4 403 aa22.5■■□□□ 1.19
AP3S1-201ENST00000316788 KRBA2Q6ZNG9 492 aa22.5■■□□□ 1.19
AP3S1-201ENST00000316788 ZNF579Q8NAF0 562 aaKnown RBP22.5■■□□□ 1.19
AP3S1-201ENST00000316788 IFNKQ9P0W0 207 aa22.5■■□□□ 1.19
AP3S1-201ENST00000316788 PSDA5PKW4 1024 aaPredicted RBP22.49■■□□□ 1.19
AP3S1-201ENST00000316788 MYL5Q02045 173 aa22.49■■□□□ 1.19
AP3S1-201ENST00000316788 PTPN14Q15678 1187 aa22.49■■□□□ 1.19
AP3S1-201ENST00000316788 TSC1Q92574 1164 aa22.49■■□□□ 1.19
AP3S1-201ENST00000316788 SMC2O95347 1197 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 SLC27A3Q5K4L6 730 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 CRACR2BQ8N4Y2 399 aaPredicted RBP22.48■■□□□ 1.19
AP3S1-201ENST00000316788 ZNF652Q9Y2D9 606 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 PCP11498 1178 aaKnown RBP22.48■■□□□ 1.19
AP3S1-201ENST00000316788 PTPREP23469 700 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 BCAMP50895 628 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 CHRNDQ07001 517 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 AMIGO3Q86WK7 504 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 MYL10Q9BUA6 226 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 KCNH3Q9ULD8 1083 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 ZNF831Q5JPB2 1677 aa22.48■■□□□ 1.19
AP3S1-201ENST00000316788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.47■■□□□ 1.19
AP3S1-201ENST00000316788 BIN1O00499 593 aa22.47■■□□□ 1.19
AP3S1-201ENST00000316788 PRKAB2O43741 272 aa22.47■■□□□ 1.19
AP3S1-201ENST00000316788 FANCCQ00597 558 aa22.47■■□□□ 1.19
AP3S1-201ENST00000316788 CLEC4GQ6UXB4 293 aa22.47■■□□□ 1.19
AP3S1-201ENST00000316788 DIS3L2Q8IYB7 885 aaKnown RBP22.47■■□□□ 1.19
AP3S1-201ENST00000316788 PDCL2Q8N4E4 241 aa22.47■■□□□ 1.19
AP3S1-201ENST00000316788 GNL3LQ9NVN8 582 aaKnown RBP22.47■■□□□ 1.19
AP3S1-201ENST00000316788 LRP2BPQ9P2M1 347 aa22.47■■□□□ 1.19
AP3S1-201ENST00000316788 COL5A3P25940 1745 aaPredicted RBP22.46■■□□□ 1.19
AP3S1-201ENST00000316788 RGPD3A6NKT7 1758 aaPredicted RBP22.46■■□□□ 1.19
AP3S1-201ENST00000316788 RGPD4Q7Z3J3 1758 aa22.46■■□□□ 1.19
AP3S1-201ENST00000316788 TAF1LQ8IZX4 1826 aa22.46■■□□□ 1.19
AP3S1-201ENST00000316788 PPARAQ07869 468 aa22.46■■□□□ 1.19
AP3S1-201ENST00000316788 UBE4AQ14139 1066 aa22.46■■□□□ 1.19
AP3S1-201ENST00000316788 OLFM4Q6UX06 510 aa22.46■■□□□ 1.19
AP3S1-201ENST00000316788 METTL16Q86W50 562 aaKnown RBP22.46■■□□□ 1.19
AP3S1-201ENST00000316788 RNF26Q9BY78 433 aaPredicted RBP22.46■■□□□ 1.19
AP3S1-201ENST00000316788 HSD3B7Q9H2F3 369 aa22.46■■□□□ 1.19
AP3S1-201ENST00000316788 INCENPQ9NQS7 918 aa22.46■■□□□ 1.19
AP3S1-201ENST00000316788 CEP131Q9UPN4 1083 aa22.46■■□□□ 1.19
AP3S1-201ENST00000316788 NIP7Q9Y221 180 aaKnown RBP eCLIP22.46■■□□□ 1.19
AP3S1-201ENST00000316788 MYH14Q7Z406 1995 aaKnown RBP22.46■■□□□ 1.19
AP3S1-201ENST00000316788 SFPQP23246 707 aaKnown RBP eCLIP22.45■■□□□ 1.19
AP3S1-201ENST00000316788 NCBP1Q09161 790 aaKnown RBP22.45■■□□□ 1.19
AP3S1-201ENST00000316788 TMED8Q6PL24 325 aaPredicted RBP22.45■■□□□ 1.19
AP3S1-201ENST00000316788 TMC6Q7Z403 805 aa22.45■■□□□ 1.19
AP3S1-201ENST00000316788 ZNF654Q8IZM8 581 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms