RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 SBK1Q52WX2 424 aa18.3■□□□□ 0.52
HNF4A-202ENST00000316673 FOXP4Q8IVH2 680 aaPredicted RBP18.3■□□□□ 0.52
HNF4A-202ENST00000316673 EHD4Q9H223 541 aa18.3■□□□□ 0.52
HNF4A-202ENST00000316673 HERC5Q9UII4 1024 aaKnown RBP18.3■□□□□ 0.52
HNF4A-202ENST00000316673 NAV1Q8NEY1 1877 aa18.3■□□□□ 0.52
HNF4A-202ENST00000316673 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
HNF4A-202ENST00000316673 TRAF5O00463 557 aa18.29■□□□□ 0.52
HNF4A-202ENST00000316673 TBC1D12O60347 775 aa18.29■□□□□ 0.52
HNF4A-202ENST00000316673 NBPF12Q5TAG4 269 aaPredicted RBP18.29■□□□□ 0.52
HNF4A-202ENST00000316673 ZFPM1Q8IX07 1006 aa18.29■□□□□ 0.52
HNF4A-202ENST00000316673 TRIM34Q9BYJ4 488 aa18.29■□□□□ 0.52
HNF4A-202ENST00000316673 IL25Q9H293 177 aa18.29■□□□□ 0.52
HNF4A-202ENST00000316673 PALD1Q9ULE6 856 aa18.29■□□□□ 0.52
HNF4A-202ENST00000316673 PTH1RQ03431 593 aa18.28■□□□□ 0.52
HNF4A-202ENST00000316673 NECTIN1Q15223 517 aa18.28■□□□□ 0.52
HNF4A-202ENST00000316673 SH3BP5LQ7L8J4 393 aa18.28■□□□□ 0.52
HNF4A-202ENST00000316673 SAP30BPQ9UHR5 308 aaKnown RBP18.28■□□□□ 0.52
HNF4A-202ENST00000316673 TRPM7Q96QT4 1865 aa18.28■□□□□ 0.52
HNF4A-202ENST00000316673 UNCXA6NJT0 531 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 USP17L12C9JPN9 530 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 USP17L21D6R901 530 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 CELF2O95319 508 aaKnown RBP18.27■□□□□ 0.52
HNF4A-202ENST00000316673 MAP3K10Q02779 954 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 PRAMEF18Q5VWM3 479 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 CTR9Q6PD62 1173 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 METTL16Q86W50 562 aaKnown RBP18.27■□□□□ 0.52
HNF4A-202ENST00000316673 C2orf69Q8N8R5 385 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 KCNB2Q92953 911 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 KIF2CQ99661 725 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 TM6SF1Q9BZW5 370 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 ZNF287Q9HBT7 754 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 EPB41L4AQ9HCS5 686 aaPredicted RBP18.27■□□□□ 0.52
HNF4A-202ENST00000316673 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
HNF4A-202ENST00000316673 DDX60LQ5H9U9 1706 aaKnown RBP18.27■□□□□ 0.52
HNF4A-202ENST00000316673 SLC3A2P08195 630 aaKnown RBP18.26■□□□□ 0.51
HNF4A-202ENST00000316673 C12orf60Q5U649 245 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 VPS53Q5VIR6 699 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 ARMC9Q7Z3E5 817 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 CRACR2BQ8N4Y2 399 aaPredicted RBP18.26■□□□□ 0.51
HNF4A-202ENST00000316673 ZNF408Q9H9D4 720 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 BAZ2AQ9UIF9 1905 aaKnown RBP18.26■□□□□ 0.51
HNF4A-202ENST00000316673 FOXP2O15409 715 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 FGAP02671 866 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 HMGB1P09429 215 aaKnown RBP18.26■□□□□ 0.51
HNF4A-202ENST00000316673 IREB2P48200 963 aaKnown RBP18.26■□□□□ 0.51
HNF4A-202ENST00000316673 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
HNF4A-202ENST00000316673 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 ZNF341Q9BYN7 854 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 GBA2Q9HCG7 927 aaPredicted RBP18.26■□□□□ 0.51
HNF4A-202ENST00000316673 SWAP70Q9UH65 585 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 SNX14Q9Y5W7 946 aa18.26■□□□□ 0.51
HNF4A-202ENST00000316673 NEK4P51957 841 aa18.25■□□□□ 0.51
HNF4A-202ENST00000316673 TTLL12Q14166 644 aaPredicted RBP18.25■□□□□ 0.51
HNF4A-202ENST00000316673 MAP3K11Q16584 847 aa18.25■□□□□ 0.51
HNF4A-202ENST00000316673 KLRG1Q96E93 195 aa18.25■□□□□ 0.51
HNF4A-202ENST00000316673 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.25■□□□□ 0.513e-7■■■□□ 16.9
HNF4A-202ENST00000316673 CYP46A1Q9Y6A2 500 aa18.25■□□□□ 0.51
HNF4A-202ENST00000316673 PAPPA2Q9BXP8 1791 aa18.24■□□□□ 0.51
HNF4A-202ENST00000316673 TMEM88BA6NKF7 163 aa18.24■□□□□ 0.51
HNF4A-202ENST00000316673 MINDY4BA8MYZ0 360 aa18.24■□□□□ 0.51
HNF4A-202ENST00000316673 SLC27A2O14975 620 aa18.24■□□□□ 0.51
HNF4A-202ENST00000316673 PLCD1P51178 756 aa18.24■□□□□ 0.51
HNF4A-202ENST00000316673 DLK2Q6UY11 383 aa18.24■□□□□ 0.51
HNF4A-202ENST00000316673 CDAN1Q8IWY9 1227 aa18.24■□□□□ 0.51
HNF4A-202ENST00000316673 SSC5DA1L4H1 1573 aa18.24■□□□□ 0.51
HNF4A-202ENST00000316673 ROBO3Q96MS0 1386 aa18.24■□□□□ 0.51
HNF4A-202ENST00000316673 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
HNF4A-202ENST00000316673 PCP11498 1178 aaKnown RBP18.23■□□□□ 0.51
HNF4A-202ENST00000316673 NT5C2P49902 561 aa18.23■□□□□ 0.51
HNF4A-202ENST00000316673 PDE4BQ07343 736 aa18.23■□□□□ 0.51
HNF4A-202ENST00000316673 PPARAQ07869 468 aa18.23■□□□□ 0.51
HNF4A-202ENST00000316673 CST9Q5W186 159 aa18.23■□□□□ 0.51
HNF4A-202ENST00000316673 TBC1D2Q9BYX2 928 aa18.23■□□□□ 0.51
HNF4A-202ENST00000316673 ANAPC4Q9UJX5 808 aa18.23■□□□□ 0.51
HNF4A-202ENST00000316673 K7ELQ4 463 aaPredicted RBP18.22■□□□□ 0.51
HNF4A-202ENST00000316673 ZNF213O14771 459 aa18.22■□□□□ 0.51
HNF4A-202ENST00000316673 GABPAQ06546 454 aa18.22■□□□□ 0.51
HNF4A-202ENST00000316673 C16orf86Q6ZW13 317 aa18.22■□□□□ 0.51
HNF4A-202ENST00000316673 MIGA2Q7L4E1 593 aa18.22■□□□□ 0.51
HNF4A-202ENST00000316673 JMYQ8N9B5 988 aa18.22■□□□□ 0.51
HNF4A-202ENST00000316673 ZNF112Q9UJU3 913 aa18.22■□□□□ 0.51
HNF4A-202ENST00000316673 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
HNF4A-202ENST00000316673 LAMB1P07942 1786 aa18.22■□□□□ 0.51
HNF4A-202ENST00000316673 LAMA4Q16363 1823 aa18.21■□□□□ 0.51
HNF4A-202ENST00000316673 USP2O75604 605 aaPredicted RBP18.21■□□□□ 0.51
HNF4A-202ENST00000316673 FMR1Q06787 632 aaKnown RBP eCLIP18.21■□□□□ 0.51
HNF4A-202ENST00000316673 ANKRD1Q15327 319 aa18.21■□□□□ 0.51
HNF4A-202ENST00000316673 SLC4A8Q2Y0W8 1093 aa18.21■□□□□ 0.51
HNF4A-202ENST00000316673 BLOC1S2Q6QNY1 142 aa18.21■□□□□ 0.51
HNF4A-202ENST00000316673 ANKRD13AQ8IZ07 590 aa18.21■□□□□ 0.51
HNF4A-202ENST00000316673 JAKMIP1Q96N16 626 aaKnown RBP18.21■□□□□ 0.51
HNF4A-202ENST00000316673 RNF41Q9H4P4 317 aaPredicted RBP18.21■□□□□ 0.51
HNF4A-202ENST00000316673 CREBZFQ9NS37 354 aa18.21■□□□□ 0.51
HNF4A-202ENST00000316673 GINM1Q9NU53 330 aa18.21■□□□□ 0.51
HNF4A-202ENST00000316673 CTNND1O60716 968 aaKnown RBP18.2■□□□□ 0.5
HNF4A-202ENST00000316673 CYP2D6P10635 497 aa18.2■□□□□ 0.5
HNF4A-202ENST00000316673 CASTP20810 708 aaKnown RBP18.2■□□□□ 0.5
HNF4A-202ENST00000316673 MAP3K9P80192 1104 aa18.2■□□□□ 0.5
HNF4A-202ENST00000316673 HTRA3P83110 453 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms