RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 PRIMPOLQ96LW4 560 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 VPS16Q9H269 839 aa7.04□□□□□ -1.28
PRKDC-201ENST00000314191 SALL3Q9BXA9 1300 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 CUTAO60888 179 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 CCDC40Q4G0X9 1142 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 MRVI1Q9Y6F6 885 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 KIF20AO95235 890 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 MFSD14BQ5SR56 506 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 VEZTQ9HBM0 779 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 RIPOR2Q9Y4F9 1068 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 CDHR2Q9BYE9 1310 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 TCP10Q12799 353 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 DIXDC1Q155Q3 683 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 KIAA1468Q9P260 1216 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 TNNT3P45378 269 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-201ENST00000314191 ZFYVE27Q5T4F4 411 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 MARCH10Q8NA82 808 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-201ENST00000314191 LRMPQ12912 555 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 SLC39A14Q15043 492 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 KARSQ15046 597 aaKnown RBP7.03□□□□□ -1.28
PRKDC-201ENST00000314191 OGFOD1Q8N543 542 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 BLZF1Q9H2G9 400 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 NONOQ15233 471 aaKnown RBP eCLIP7.03□□□□□ -1.28
PRKDC-201ENST00000314191 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.03□□□□□ -1.28
PRKDC-201ENST00000314191 DIP2BQ9P265 1576 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 MED23Q9ULK4 1368 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 KRT79Q5XKE5 535 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 UTYO14607 1347 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 RPS6KA4O75676 772 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 PRDX5P30044 214 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 SYCP1Q15431 976 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 SPA17Q15506 151 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 CYB5R4Q7L1T6 521 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 PDCL3Q9H2J4 239 aa7.03□□□□□ -1.28
PRKDC-201ENST00000314191 CSF1RP07333 972 aa7.02□□□□□ -1.28
PRKDC-201ENST00000314191 THRAP3Q9Y2W1 955 aaKnown RBP7.02□□□□□ -1.28
PRKDC-201ENST00000314191 SH2B2O14492 632 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 SPAG1Q07617 926 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 PPP2R5BQ15173 497 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 LINC00301Q8NCQ3 95 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 RTEL1Q9NZ71 1219 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 TTF2Q9UNY4 1162 aaKnown RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 ARID4AP29374 1257 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 GNA11P29992 359 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 SYT10Q6XYQ8 523 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 TSC1Q92574 1164 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 SEPT11Q9NVA2 429 aaKnown RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 CEP152O94986 1710 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 BTDP43251 543 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 TMCO3Q6UWJ1 677 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 SMARCC2Q8TAQ2 1214 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 PSMA7O14818 248 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 KIAA0825Q8IV33 1275 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 SEPT12Q8IYM1 358 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 GPKOWQ92917 476 aaPredicted RBP eCLIP7.02□□□□□ -1.295e-6■■■□□ 15.9
PRKDC-201ENST00000314191 MMRN2Q9H8L6 949 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 NRBP1Q9UHY1 535 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 MINPP1Q9UNW1 487 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 CMA1P23946 247 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 NKX1-1Q15270 411 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 NEURL4Q96JN8 1562 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 FEZ1Q99689 392 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 RRP9O43818 475 aaKnown RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 ERLIN1O75477 346 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 SCNN1DP51172 638 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 NR5A1Q13285 461 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 MB21D2Q8IYB1 491 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 ZNF34Q8IZ26 560 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 PNMA1Q8ND90 353 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 RUFY1Q96T51 708 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 XPO4Q9C0E2 1151 aaKnown RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 BIN2Q9UBW5 565 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 FMNL1O95466 1100 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 PDE4DQ08499 809 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 ZYXQ15942 572 aaKnown RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 LUC7LQ9NQ29 371 aaKnown RBP7.02□□□□□ -1.29
PRKDC-201ENST00000314191 USP40Q9NVE5 1235 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 PYCARDQ9ULZ3 195 aa7.02□□□□□ -1.29
PRKDC-201ENST00000314191 SPDYE4A6NLX3 237 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 IFNAR1P17181 557 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 CLEC17AQ6ZS10 378 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 C11orf57Q6ZUT1 292 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-201ENST00000314191 DYNLL2Q96FJ2 89 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 LRWD1Q9UFC0 647 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 PCDHA5Q9Y5H7 936 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 PRDM10Q9NQV6 1147 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.01□□□□□ -1.29
PRKDC-201ENST00000314191 ATP8A2Q9NTI2 1148 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 QRICH2Q9H0J4 1663 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 ATP2B4P23634 1241 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 DYMQ7RTS9 669 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 ACBD3Q9H3P7 528 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 HDAC9Q9UKV0 1011 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 CARMIL3Q8ND23 1372 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 DYNC1I1O14576 645 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 PTPN21Q16825 1174 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 MLKLQ8NB16 471 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 RASGRP4Q8TDF6 673 aa7.01□□□□□ -1.29
PRKDC-201ENST00000314191 KRBA2Q6ZNG9 492 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms