RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 PARP1P09874 1014 aaKnown RBP15.23■□□□□ 0.03
CLCN6-201ENST00000312413 ST5P78524 1137 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
CLCN6-201ENST00000312413 SAR1BQ9Y6B6 198 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 USH1CQ9Y6N9 552 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 KRT15P19012 456 aa15.23■□□□□ 0.03
CLCN6-201ENST00000312413 PPANQ9NQ55 473 aaKnown RBP15.23■□□□□ 0.03
CLCN6-201ENST00000312413 CALUO43852 315 aaPredicted RBP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 MRPL12P52815 198 aaKnown RBP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 GNGT1P63211 74 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 EIF4A2Q14240 407 aaKnown RBP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 POSTNQ15063 836 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 PIK3AP1Q6ZUJ8 805 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 NCOA5Q9HCD5 579 aaKnown RBP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 PFDN4Q9NQP4 134 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 WWC3Q9ULE0 1092 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 ANGEL1Q9UNK9 670 aaKnown RBP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 B4E1Z4 1266 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 FLOT1O75955 427 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 MAP7Q14244 749 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 LGSNQ5TDP6 509 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 CCDC84Q86UT8 332 aaPredicted RBP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 SPATS2Q86XZ4 545 aaKnown RBP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 XPO4Q9C0E2 1151 aaKnown RBP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 ZBTB21Q9ULJ3 1066 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 GCKP35557 465 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 PPARDQ03181 441 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 DENND2CQ68D51 928 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 CCDC51Q96ER9 411 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 GBP5Q96PP8 586 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 AOX1Q06278 1338 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 SGSM2O43147 1006 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 MBD4O95243 580 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 MTHFSDQ2M296 383 aaKnown RBP15.22■□□□□ 0.03
CLCN6-201ENST00000312413 AFAP1L2Q8N4X5 818 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 TSC1Q92574 1164 aa15.22■□□□□ 0.03
CLCN6-201ENST00000312413 ATP6V1AP38606 617 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 KLHL30Q0D2K2 578 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 GDAP1L1Q96MZ0 367 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 MSH6P52701 1360 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 UNC13AQ9UPW8 1703 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 SH3BP5O60239 455 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 TTC38Q5R3I4 469 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 PEX26Q7Z412 305 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 CCDC105Q8IYK2 499 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 CCDC170Q8IYT3 715 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 OTUD7AQ8TE49 926 aaPredicted RBP15.21■□□□□ 0.03
CLCN6-201ENST00000312413 TACO1Q9BSH4 297 aaKnown RBP15.21■□□□□ 0.03
CLCN6-201ENST00000312413 BICC1Q9H694 974 aaKnown RBP15.21■□□□□ 0.03
CLCN6-201ENST00000312413 KDM2BQ8NHM5 1336 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 CD109Q6YHK3 1445 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 B4DLN1 442 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 HAUS3Q68CZ6 603 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 RAB17Q9H0T7 212 aa15.21■□□□□ 0.03
CLCN6-201ENST00000312413 ADAMTS2O95450 1211 aa15.21■□□□□ 0.02
CLCN6-201ENST00000312413 KRT24Q2M2I5 525 aa15.21■□□□□ 0.02
CLCN6-201ENST00000312413 ZNF622Q969S3 477 aaKnown RBP eCLIP15.21■□□□□ 0.024e-6■■□□□ 13.5
CLCN6-201ENST00000312413 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.02
CLCN6-201ENST00000312413 SETDB2Q96T68 719 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 HIP1RO75146 1068 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 SH3BGRP55822 239 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-201ENST00000312413 OTUD7BQ6GQQ9 843 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 PHLDB3Q6NSJ2 640 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 CDC37L1Q7L3B6 337 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 IQCDQ96DY2 449 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 IFIH1Q9BYX4 1025 aaKnown RBP15.2■□□□□ 0.02
CLCN6-201ENST00000312413 POLKQ9UBT6 870 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 PARP2Q9UGN5 583 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 STK38LQ9Y2H1 464 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 SF3A3Q12874 501 aaKnown RBP eCLIP15.2■□□□□ 0.023e-8■■■□□ 17.4
CLCN6-201ENST00000312413 FBXO31Q5XUX0 539 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-201ENST00000312413 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-201ENST00000312413 NUCKS1Q9H1E3 243 aaKnown RBP15.2■□□□□ 0.02
CLCN6-201ENST00000312413 EFCAB8A8MWE9 144 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 GOLGA8KD6RF30 607 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 RGS16O15492 202 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-201ENST00000312413 BRD1O95696 1058 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 STX2P32856 288 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 MUM1Q2TAK8 710 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 FCHSD1Q86WN1 690 aa15.2■□□□□ 0.02
CLCN6-201ENST00000312413 MYCBPQ99417 103 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-201ENST00000312413 ZNF215Q9UL58 517 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-201ENST00000312413 ZCRB1Q8TBF4 217 aaKnown RBP15.2■□□□□ 0.02
CLCN6-201ENST00000312413 CTNNA1P35221 906 aaKnown RBP15.19■□□□□ 0.02
CLCN6-201ENST00000312413 BCAP29Q9UHQ4 241 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 NIP7Q9Y221 180 aaKnown RBP eCLIP15.19■□□□□ 0.02
CLCN6-201ENST00000312413 V9GY48 417 aaPredicted RBP15.19■□□□□ 0.02
CLCN6-201ENST00000312413 KIF14Q15058 1648 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 ERCC3P19447 782 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 TRPC3Q13507 836 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 SFMBT2Q5VUG0 894 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 NELFBQ8WX92 580 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 RAB3IPQ96QF0 476 aaPredicted RBP15.19■□□□□ 0.02
CLCN6-201ENST00000312413 RABGAP1Q9Y3P9 1069 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 BACH1O14867 736 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 KLHL14Q9P2G3 628 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 PIK3C2GO75747 1445 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 SLC8A1P32418 973 aa15.19■□□□□ 0.02
CLCN6-201ENST00000312413 TROVE2P10155 538 aaKnown RBP eCLIP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms