RNA–Protein interactions for RNA: ENST00000312055.9

CKAP5-201, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 5 BASIC

Gene CKAP5, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-201ENST00000312055 SESTD1Q86VW0 696 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 PANK2Q9BZ23 570 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 SCAF8Q9UPN6 1271 aaKnown RBP4.29□□□□□ -1.72
CKAP5-201ENST00000312055 ANKARQ7Z5J8 1434 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 PRAMEF22A3QJZ6 481 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 FAM13AO94988 1023 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 EPHX2P34913 555 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 ELMSAN1Q6PJG2 1045 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 ZBTB38Q8NAP3 1195 aaPredicted RBP4.29□□□□□ -1.72
CKAP5-201ENST00000312055 CAGE1Q8TC20 777 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 TSPYL2Q9H2G4 693 aaPredicted RBP4.29□□□□□ -1.72
CKAP5-201ENST00000312055 CCPG1Q9ULG6 757 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 NBPF7P0C2Y1 421 aaPredicted RBP4.29□□□□□ -1.72
CKAP5-201ENST00000312055 TNNT1P13805 278 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 IL13P35225 146 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 ARPP19P56211 112 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 MAP1SQ66K74 1059 aaPredicted RBP4.29□□□□□ -1.72
CKAP5-201ENST00000312055 NLRX1Q86UT6 975 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 LRRC47Q8N1G4 583 aaKnown RBP4.29□□□□□ -1.72
CKAP5-201ENST00000312055 UPF3BQ9BZI7 483 aaKnown RBP4.29□□□□□ -1.72
CKAP5-201ENST00000312055 GREM2Q9H772 168 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 GGA3Q9NZ52 723 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 CARMIL3Q8ND23 1372 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 LRRC37A3O60309 1634 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 POTEB2H3BUK9 544 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 RXRAP19793 462 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 KCNJ6P48051 423 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 CRB1P82279 1406 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 IFRD2Q12894 506 aaPredicted RBP4.29□□□□□ -1.72
CKAP5-201ENST00000312055 NFIXQ14938 502 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 FAM47AQ5JRC9 791 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 SPATA31A5Q5VU36 1347 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 FRMPD2Q68DX3 1309 aaPredicted RBP4.29□□□□□ -1.72
CKAP5-201ENST00000312055 FERMT3Q86UX7 667 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 SPATA31A7Q8IWB4 1347 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 TSPYL6Q8N831 410 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 RNF34Q969K3 372 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 ZNF341Q9BYN7 854 aa4.29□□□□□ -1.72
CKAP5-201ENST00000312055 SETD1BQ9UPS6 1966 aaKnown RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 CHD2O14647 1828 aaKnown RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 COL15A1P39059 1388 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 KIF28PB7ZC32 967 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 EIF5P55010 431 aaKnown RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 ANGEL2Q5VTE6 544 aaKnown RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 TNS4Q8IZW8 715 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 GOLGA6L1Q8N7Z2 621 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 IPO4Q8TEX9 1081 aaKnown RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 TDRD3Q9H7E2 651 aaKnown RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 SUGCTQ9HAC7 445 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 AATKQ6ZMQ8 1374 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 GMPSP49915 693 aaPredicted RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 CCDC40Q4G0X9 1142 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 MCMDC2Q4G0Z9 681 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 FAM117BQ6P1L5 589 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 G2E3Q7L622 706 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 PPP1R16BQ96T49 567 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 SLITRK6Q9H5Y7 841 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 ATG3Q9NT62 314 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 TSKSQ9UJT2 592 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 TMEM232C9JQI7 657 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 TRPA1O75762 1119 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 MARCKSP29966 332 aaPredicted RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 EIF4A1P60842 406 aaKnown RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 TMTC2Q8N394 836 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 SMARCE1Q969G3 411 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 IFT74Q96LB3 600 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 ALG1Q9BT22 464 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 ZNRF3Q9ULT6 936 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 ZBTB12Q9Y330 459 aaPredicted RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 SERPINC1P01008 464 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 NEFHP12036 1026 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 TRIM27P14373 513 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 CYP2B6P20813 491 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 GRIPAP1Q4V328 841 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 SUSD4Q5VX71 490 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 CDC37L1Q7L3B6 337 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 MARCH10Q8NA82 808 aaPredicted RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 PIDD1Q9HB75 910 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 DACH1Q9UI36 760 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 CDK12Q9NYV4 1490 aaPredicted RBP4.28□□□□□ -1.72
CKAP5-201ENST00000312055 NCOA3Q9Y6Q9 1424 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 RTL9Q8NET4 1388 aa4.28□□□□□ -1.72
CKAP5-201ENST00000312055 TLR3O15455 904 aaKnown RBP4.28□□□□□ -1.73
CKAP5-201ENST00000312055 ZSCAN20P17040 1043 aaPredicted RBP4.28□□□□□ -1.73
CKAP5-201ENST00000312055 STRN3Q13033 797 aa4.28□□□□□ -1.73
CKAP5-201ENST00000312055 FAM43BQ6ZT52 329 aaPredicted RBP4.28□□□□□ -1.73
CKAP5-201ENST00000312055 KCNV2Q8TDN2 545 aa4.28□□□□□ -1.73
CKAP5-201ENST00000312055 SUCLG2Q96I99 432 aa4.28□□□□□ -1.73
CKAP5-201ENST00000312055 ZSCAN31Q96LW9 406 aaPredicted RBP4.28□□□□□ -1.73
CKAP5-201ENST00000312055 PLEKHF1Q96S99 279 aa4.28□□□□□ -1.73
CKAP5-201ENST00000312055 GBP3Q9H0R5 595 aa4.28□□□□□ -1.73
CKAP5-201ENST00000312055 ORC3Q9UBD5 711 aaPredicted RBP4.28□□□□□ -1.73
CKAP5-201ENST00000312055 AXIN2Q9Y2T1 843 aa4.28□□□□□ -1.73
CKAP5-201ENST00000312055 TRIM17Q9Y577 477 aa4.28□□□□□ -1.73
CKAP5-201ENST00000312055 FMN2Q9NZ56 1722 aa4.28□□□□□ -1.73
CKAP5-201ENST00000312055 ADAMTS7Q9UKP4 1686 aa4.27□□□□□ -1.73
CKAP5-201ENST00000312055 CCL15-CCL14A0A0B4J2E2 113 aa4.27□□□□□ -1.73
CKAP5-201ENST00000312055 UBE2Q2LH0YL09 131 aa4.27□□□□□ -1.73
CKAP5-201ENST00000312055 IGFBP4P22692 258 aa4.27□□□□□ -1.73
CKAP5-201ENST00000312055 CTNNA2P26232 953 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms