RNA–Protein interactions for RNA: ENST00000311925.6

CCL19-201, Transcript of C-C motif chemokine ligand 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL19, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-201ENST00000311925 SCN9AQ15858 1988 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 BAZ2AQ9UIF9 1905 aaKnown RBP16.77■□□□□ 0.28
CCL19-201ENST00000311925 ERICH2A1L162 156 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 F8W031 263 aaPredicted RBP16.77■□□□□ 0.28
CCL19-201ENST00000311925 ORC4O43929 436 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 CRKP46108 304 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 TNIP1Q15025 636 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 C12orf60Q5U649 245 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 TGFBRAP1Q8WUH2 860 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 LLPHQ9BRT6 129 aaKnown RBP16.77■□□□□ 0.28
CCL19-201ENST00000311925 ADARB2Q9NS39 739 aaKnown RBP16.77■□□□□ 0.28
CCL19-201ENST00000311925 PGAP2Q9UHJ9 254 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 HDAC9Q9UKV0 1011 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 ANGEL1Q9UNK9 670 aaKnown RBP16.77■□□□□ 0.28
CCL19-201ENST00000311925 SMC3Q9UQE7 1217 aa16.77■□□□□ 0.28
CCL19-201ENST00000311925 FOCADQ5VW36 1801 aa16.77■□□□□ 0.27
CCL19-201ENST00000311925 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.27
CCL19-201ENST00000311925 NEDD4P46934 1319 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 B4E1Z4 1266 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 PFKFB2O60825 505 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
CCL19-201ENST00000311925 LIFRP42702 1097 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 GMPSP49915 693 aaPredicted RBP16.76■□□□□ 0.27
CCL19-201ENST00000311925 ANTXR2P58335 489 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 MAP1SQ66K74 1059 aaPredicted RBP16.76■□□□□ 0.27
CCL19-201ENST00000311925 KIAA0825Q8IV33 1275 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 AGBL3Q8NEM8 1001 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 KCNQ5Q9NR82 932 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 TOMM22Q9NS69 142 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 ZSWIM5Q9P217 1185 aa16.76■□□□□ 0.27
CCL19-201ENST00000311925 FLT1P17948 1338 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
CCL19-201ENST00000311925 KDM4AO75164 1064 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 POLR3DP05423 398 aaPredicted RBP16.75■□□□□ 0.27
CCL19-201ENST00000311925 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
CCL19-201ENST00000311925 CCDC178Q5BJE1 867 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 TTC6Q86TZ1 520 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 IQCA1Q86XH1 822 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 DPF2Q92785 391 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 GTF3C6Q969F1 213 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 MXD3Q9BW11 206 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 USP40Q9NVE5 1235 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCL19-201ENST00000311925 CDK5RAP2Q96SN8 1893 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 CNTNAP1P78357 1384 aa16.75■□□□□ 0.27
CCL19-201ENST00000311925 SH2B2O14492 632 aaPredicted RBP16.74■□□□□ 0.27
CCL19-201ENST00000311925 RAD17O75943 681 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 LARGE1O95461 756 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 RCAN1P53805 252 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 TMEM67Q5HYA8 995 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 RRP12Q5JTH9 1297 aaKnown RBP16.74■□□□□ 0.27
CCL19-201ENST00000311925 APOBEC3HQ6NTF7 200 aaKnown RBP16.74■□□□□ 0.27
CCL19-201ENST00000311925 CYB5R4Q7L1T6 521 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 SGMS1Q86VZ5 419 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 OGFOD1Q8N543 542 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 IGDCC4Q8TDY8 1250 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 UBAC1Q9BSL1 405 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 LRRC2Q9BYS8 371 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 KIF3AQ9Y496 699 aa16.74■□□□□ 0.27
CCL19-201ENST00000311925 DDX60LQ5H9U9 1706 aaKnown RBP16.73■□□□□ 0.27
CCL19-201ENST00000311925 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
CCL19-201ENST00000311925 USP17L8P0C7I0 530 aa16.73■□□□□ 0.27
CCL19-201ENST00000311925 PDCP20941 246 aa16.73■□□□□ 0.27
CCL19-201ENST00000311925 PDIA3P30101 505 aaKnown RBP16.73■□□□□ 0.27
CCL19-201ENST00000311925 RBM5P52756 815 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCL19-201ENST00000311925 APOBRQ0VD83 1088 aa16.73■□□□□ 0.27
CCL19-201ENST00000311925 RAB3GAP1Q15042 981 aa16.73■□□□□ 0.27
CCL19-201ENST00000311925 SYNE3Q6ZMZ3 975 aa16.73■□□□□ 0.27
CCL19-201ENST00000311925 MAPKAPK5Q8IW41 473 aa16.73■□□□□ 0.27
CCL19-201ENST00000311925 ZC3H15Q8WU90 426 aaKnown RBP16.73■□□□□ 0.27
CCL19-201ENST00000311925 GMLQ99445 158 aa16.73■□□□□ 0.27
CCL19-201ENST00000311925 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
CCL19-201ENST00000311925 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
CCL19-201ENST00000311925 KLF18A0A0U1RQI7 1052 aa16.72■□□□□ 0.27
CCL19-201ENST00000311925 CCDC69A6NI79 296 aa16.72■□□□□ 0.27
CCL19-201ENST00000311925 PSMD14O00487 310 aa16.72■□□□□ 0.27
CCL19-201ENST00000311925 RPS12P25398 132 aaKnown RBP16.72■□□□□ 0.27
CCL19-201ENST00000311925 HMGN5P82970 282 aaKnown RBP16.72■□□□□ 0.27
CCL19-201ENST00000311925 WTAPQ15007 396 aa16.72■□□□□ 0.27
CCL19-201ENST00000311925 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
CCL19-201ENST00000311925 CDC42EP5Q6NZY7 148 aa16.72■□□□□ 0.27
CCL19-201ENST00000311925 IDI2Q9BXS1 227 aa16.72■□□□□ 0.27
CCL19-201ENST00000311925 MKNK2Q9HBH9 465 aa16.72■□□□□ 0.27
CCL19-201ENST00000311925 MYH1P12882 1939 aa16.72■□□□□ 0.27
CCL19-201ENST00000311925 CYP2D7A0A087X1C5 515 aa16.71■□□□□ 0.27
CCL19-201ENST00000311925 RASSF10A6NK89 507 aa16.71■□□□□ 0.27
CCL19-201ENST00000311925 RANBP6O60518 1105 aaKnown RBP16.71■□□□□ 0.27
CCL19-201ENST00000311925 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
CCL19-201ENST00000311925 HLA-DOAP06340 250 aa16.71■□□□□ 0.27
CCL19-201ENST00000311925 HIRAP54198 1017 aaPredicted RBP16.71■□□□□ 0.27
CCL19-201ENST00000311925 NFXL1Q6ZNB6 911 aa16.71■□□□□ 0.27
CCL19-201ENST00000311925 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
CCL19-201ENST00000311925 MTMR14Q8NCE2 650 aa16.71■□□□□ 0.27
CCL19-201ENST00000311925 DHX36Q9H2U1 1008 aaKnown RBP16.71■□□□□ 0.27
CCL19-201ENST00000311925 LY9Q9HBG7 655 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms