RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 NLRP3Q96P20 1036 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 GSPT1P15170 499 aaKnown RBP14.69□□□□□ -0.06
SNED1-201ENST00000310397 TSNAXIP1Q2TAA8 658 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 SLC4A8Q2Y0W8 1093 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 ZNF215Q9UL58 517 aaPredicted RBP14.69□□□□□ -0.06
SNED1-201ENST00000310397 SHROOM2Q13796 1616 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 GPAA1O43292 621 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 EIF4G3O43432 1585 aaKnown RBP14.69□□□□□ -0.06
SNED1-201ENST00000310397 B4E1Z4 1266 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 DCAF17Q5H9S7 520 aaPredicted RBP14.69□□□□□ -0.06
SNED1-201ENST00000310397 CCDC63Q8NA47 563 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 EYA2O00167 538 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 PCK1P35558 622 aa14.69□□□□□ -0.06
SNED1-201ENST00000310397 FLOT1O75955 427 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 ZNF804AQ7Z570 1209 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 NYXQ9GZU5 481 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 ZSWIM6Q9HCJ5 1215 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 ATP7AQ04656 1500 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 RASSF2P50749 326 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 SMARCC2Q8TAQ2 1214 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 RABGGTAQ92696 567 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 TRMT2AQ8IZ69 625 aaKnown RBP14.68□□□□□ -0.06
SNED1-201ENST00000310397 RNMTO43148 476 aaKnown RBP14.68□□□□□ -0.06
SNED1-201ENST00000310397 DIS3L2Q8IYB7 885 aaKnown RBP14.68□□□□□ -0.06
SNED1-201ENST00000310397 FAM71BQ8TC56 605 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 ASIC2Q16515 512 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 RAB17Q9H0T7 212 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 NDC80O14777 642 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 CIB2O75838 187 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 MAP7D1Q3KQU3 841 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 CERS3Q8IU89 383 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 ARHGAP24Q8N264 748 aa14.68□□□□□ -0.06
SNED1-201ENST00000310397 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 TTC38Q5R3I4 469 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 IFIH1Q9BYX4 1025 aaKnown RBP14.67□□□□□ -0.06
SNED1-201ENST00000310397 ANTXR1Q9H6X2 564 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 MRPL12P52815 198 aaKnown RBP14.67□□□□□ -0.06
SNED1-201ENST00000310397 OR8K1Q8NGG5 319 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 SETDB2Q96T68 719 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 ANAPC4Q9UJX5 808 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 COMMD10Q9Y6G5 202 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 CLNS1AP54105 237 aaKnown RBP14.67□□□□□ -0.06
SNED1-201ENST00000310397 GAS2L3Q86XJ1 694 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 MTMR6Q9Y217 621 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 TNNI2P48788 182 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 PLBD2Q8NHP8 589 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 PARP2Q9UGN5 583 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 FEZ2Q9UHY8 353 aaPredicted RBP14.67□□□□□ -0.06
SNED1-201ENST00000310397 PARP1P09874 1014 aaKnown RBP14.67□□□□□ -0.06
SNED1-201ENST00000310397 HAUS3Q68CZ6 603 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 ARHGEF10O15013 1369 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 CETN3O15182 167 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 JAK2O60674 1132 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 PPFIA4O75335 1185 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 MAP2K2P36507 400 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 WDR66Q8TBY9 1149 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 IP6K1Q92551 441 aa14.67□□□□□ -0.06
SNED1-201ENST00000310397 PUM3Q15397 648 aaKnown RBP14.67□□□□□ -0.06
SNED1-201ENST00000310397 ATP5JP18859 108 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 ST5P78524 1137 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 DENND2CQ68D51 928 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 MBD4O95243 580 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 RGS22Q8NE09 1264 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 CCDC97Q96F63 343 aaPredicted RBP14.66□□□□□ -0.06
SNED1-201ENST00000310397 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 CALUO43852 315 aaPredicted RBP14.66□□□□□ -0.06
SNED1-201ENST00000310397 IRS4O14654 1257 aaPredicted RBP14.66□□□□□ -0.06
SNED1-201ENST00000310397 INF2Q27J81 1249 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 MIGA1Q8NAN2 632 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 NELFBQ8WX92 580 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 SPOPO43791 374 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 TIMM10P62072 90 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 LZTS2Q9BRK4 669 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 GOLGA8KD6RF30 607 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 NOL3O60936 208 aaKnown RBP14.66□□□□□ -0.06
SNED1-201ENST00000310397 MAGEA1P43355 309 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 MYSM1Q5VVJ2 828 aa14.66□□□□□ -0.06
SNED1-201ENST00000310397 CCNT1O60563 726 aaKnown RBP14.65□□□□□ -0.06
SNED1-201ENST00000310397 LETM2Q2VYF4 491 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 DDX41Q9UJV9 622 aaKnown RBP14.65□□□□□ -0.06
SNED1-201ENST00000310397 GNA14O95837 355 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 NEDD9Q14511 834 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 IQSEC3Q9UPP2 1182 aaPredicted RBP14.65□□□□□ -0.06
SNED1-201ENST00000310397 RPS6KA1Q15418 735 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 ZNF790Q6PG37 636 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 STX10O60499 249 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 ERCC5P28715 1186 aaPredicted RBP14.65□□□□□ -0.06
SNED1-201ENST00000310397 LRMPQ12912 555 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 SSH3Q8TE77 659 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 SERPINA10Q9UK55 444 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 E7EVH7 732 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 SLF1Q9BQI6 1058 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 VCXQ9H320 206 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 VCX3BQ9H321 246 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 PPP2R2CQ9Y2T4 447 aa14.65□□□□□ -0.06
SNED1-201ENST00000310397 E7EWF7 191 aa14.65□□□□□ -0.07
SNED1-201ENST00000310397 CMA1P23946 247 aa14.65□□□□□ -0.07
SNED1-201ENST00000310397 KRT40Q6A162 431 aa14.65□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms