RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 LY9Q9HBG7 655 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 HDAC9Q9UKV0 1011 aa16.57■□□□□ 0.24
EIF3F-201ENST00000309828 NID2Q14112 1375 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 WDR33Q9C0J8 1336 aaKnown RBP16.56■□□□□ 0.24
EIF3F-201ENST00000309828 PSMD14O00487 310 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 WDHD1O75717 1129 aaPredicted RBP16.56■□□□□ 0.24
EIF3F-201ENST00000309828 BRD1O95696 1058 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 WTAPQ15007 396 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 CCDC178Q5BJE1 867 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 SYNE3Q6ZMZ3 975 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 TTC6Q86TZ1 520 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 TNPO1Q92973 898 aaKnown RBP16.56■□□□□ 0.24
EIF3F-201ENST00000309828 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 GMLQ99445 158 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
EIF3F-201ENST00000309828 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 KIF3AQ9Y496 699 aa16.56■□□□□ 0.24
EIF3F-201ENST00000309828 CCDC69A6NI79 296 aa16.55■□□□□ 0.24
EIF3F-201ENST00000309828 GOLGA8BA8MQT2 603 aa16.55■□□□□ 0.24
EIF3F-201ENST00000309828 RANBP6O60518 1105 aaKnown RBP16.55■□□□□ 0.24
EIF3F-201ENST00000309828 TNIP1Q15025 636 aa16.55■□□□□ 0.24
EIF3F-201ENST00000309828 NFKBIBQ15653 356 aa16.55■□□□□ 0.24
EIF3F-201ENST00000309828 NFXL1Q6ZNB6 911 aa16.55■□□□□ 0.24
EIF3F-201ENST00000309828 C16orf86Q6ZW13 317 aa16.55■□□□□ 0.24
EIF3F-201ENST00000309828 NLGN2Q8NFZ4 835 aa16.55■□□□□ 0.24
EIF3F-201ENST00000309828 NKX2-3Q8TAU0 364 aa16.55■□□□□ 0.24
EIF3F-201ENST00000309828 ZSCAN10Q96SZ4 725 aaPredicted RBP16.55■□□□□ 0.24
EIF3F-201ENST00000309828 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
EIF3F-201ENST00000309828 NAP1L2Q9ULW6 460 aaPredicted RBP16.55■□□□□ 0.24
EIF3F-201ENST00000309828 RAD17O75943 681 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 RBM5P52756 815 aaKnown RBP eCLIP16.54■□□□□ 0.24
EIF3F-201ENST00000309828 SEC23AQ15436 765 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 CIAPIN1Q6FI81 312 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 APOA5Q6Q788 366 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 STK11IPQ8N1F8 1099 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 OSBPL5Q9H0X9 879 aaPredicted RBP16.54■□□□□ 0.24
EIF3F-201ENST00000309828 MKNK2Q9HBH9 465 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 SAP30BPQ9UHR5 308 aaKnown RBP16.54■□□□□ 0.24
EIF3F-201ENST00000309828 HPS5Q9UPZ3 1129 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 SLC12A7Q9Y666 1083 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 ECM29Q5VYK3 1845 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 ADAMTSL1Q8N6G6 1762 aa16.54■□□□□ 0.24
EIF3F-201ENST00000309828 TNKSO95271 1327 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 SMIM22K7EJ46 135 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 ZBTB43O43298 467 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 STX6O43752 255 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 PLCD1P51178 756 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 CXCL9Q07325 125 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 PPP2R5BQ15173 497 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 CPLX2Q6PUV4 134 aaKnown RBP16.53■□□□□ 0.24
EIF3F-201ENST00000309828 OGFOD1Q8N543 542 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 MTMR14Q8NCE2 650 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 NSUN7Q8NE18 718 aaKnown RBP16.53■□□□□ 0.24
EIF3F-201ENST00000309828 DHX36Q9H2U1 1008 aaKnown RBP16.53■□□□□ 0.24
EIF3F-201ENST00000309828 TCP11L1Q9NUJ3 509 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 ZDHHC9Q9Y397 364 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 MYH1P12882 1939 aa16.53■□□□□ 0.24
EIF3F-201ENST00000309828 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 TSPY2A6NKD2 308 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 PRDM1O75626 825 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 CDKL5O76039 1030 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 HLA-DOAP06340 250 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 PTMSP20962 102 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 SYT1P21579 422 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 RPS12P25398 132 aaKnown RBP16.52■□□□□ 0.24
EIF3F-201ENST00000309828 METAP2P50579 478 aaKnown RBP eCLIP16.52■□□□□ 0.24
EIF3F-201ENST00000309828 CCT2P78371 535 aaKnown RBP16.52■□□□□ 0.24
EIF3F-201ENST00000309828 PICALMQ13492 652 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 PKP1Q13835 747 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 ZNF444Q8N0Y2 327 aaPredicted RBP16.52■□□□□ 0.24
EIF3F-201ENST00000309828 RGS22Q8NE09 1264 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 EHD4Q9H223 541 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 DDX4Q9NQI0 724 aaKnown RBP16.52■□□□□ 0.24
EIF3F-201ENST00000309828 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
EIF3F-201ENST00000309828 COL2A1P02458 1487 aaPredicted RBP16.52■□□□□ 0.23
EIF3F-201ENST00000309828 PTPDC1A2A3K4 754 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 GOLGA8AA7E2F4 631 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 CPLX1O14810 134 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 ENTPD3O75355 529 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 CALM1P0DP23 149 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 CALM2P0DP24 149 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 CALM3P0DP25 149 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 YY1P25490 414 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 CDK8P49336 464 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 LARP1BQ659C4 914 aaKnown RBP16.51■□□□□ 0.23
EIF3F-201ENST00000309828 DGKHQ86XP1 1220 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 ENAHQ8N8S7 591 aaPredicted RBP16.51■□□□□ 0.23
EIF3F-201ENST00000309828 FAM184AQ8NB25 1140 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 ANKS1AQ92625 1134 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 DYNLL2Q96FJ2 89 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 ZKSCAN3Q9BRR0 538 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 TMOD2Q9NZR1 351 aa16.51■□□□□ 0.23
EIF3F-201ENST00000309828 CCDC196A0A1B0GTZ2 297 aa16.5■□□□□ 0.23
EIF3F-201ENST00000309828 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
EIF3F-201ENST00000309828 DDX11L8A8MPP1 907 aa16.5■□□□□ 0.23
EIF3F-201ENST00000309828 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
EIF3F-201ENST00000309828 ZSCAN22P10073 491 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms