RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 NSUN5Q96P11 429 aaKnown RBP6.69□□□□□ -1.34
CKS1B-201ENST00000308987 HINFPQ9BQA5 517 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 MUC3BQ9H195 1237 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 KCNK4Q9NYG8 393 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 RTCBQ9Y3I0 505 aaKnown RBP6.69□□□□□ -1.34
CKS1B-201ENST00000308987 TUBGCP6Q96RT7 1819 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 CRB1P82279 1406 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 PPIP5K1Q6PFW1 1433 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 LINC01387J3KSC0 135 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 KCNQ2O43526 872 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 ATP9BO43861 1147 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 MMP20O60882 483 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 LGR5O75473 907 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 EGFRP00533 1210 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 PSAPP07602 524 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 YY1P25490 414 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 CD68P34810 354 aaPredicted RBP6.68□□□□□ -1.34
CKS1B-201ENST00000308987 SEC13P55735 322 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 EVA1CP58658 441 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 DGKZQ13574 1117 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 CLEC10AQ8IUN9 316 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 MYRFLQ96LU7 910 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 BTAF1O14981 1849 aa6.68□□□□□ -1.34
CKS1B-201ENST00000308987 USP6P35125 1406 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 LTN1O94822 1766 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 NFAT5O94916 1531 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 XYLBO75191 536 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 HOXA10P31260 410 aaPredicted RBP6.67□□□□□ -1.34
CKS1B-201ENST00000308987 LCE4AQ5TA78 99 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 KIAA1211Q6ZU35 1233 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 CACTIN-AS1Q8N1I8 211 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 POU5F2Q8N7G0 328 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 MARCH10Q8NA82 808 aaPredicted RBP6.67□□□□□ -1.34
CKS1B-201ENST00000308987 ADAMTS19Q8TE59 1207 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 UCN2Q96RP3 112 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 FAM83CQ9BQN1 747 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 RBSNQ9H1K0 784 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 THRAP3Q9Y2W1 955 aaKnown RBP6.67□□□□□ -1.34
CKS1B-201ENST00000308987 PAPPAQ13219 1627 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 TRPM1Q7Z4N2 1603 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 NHSQ6T4R5 1651 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 AATKQ6ZMQ8 1374 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 COL24A1Q17RW2 1714 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 MON2Q7Z3U7 1717 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 OVOS2A0A0G2JMS6 1433 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 OVOS2A0A0J9YW53 1432 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 OVOS2Q6IE36 1432 aa6.67□□□□□ -1.34
CKS1B-201ENST00000308987 USP54Q70EL1 1684 aa6.66□□□□□ -1.34
CKS1B-201ENST00000308987 PLSCR1O15162 318 aa6.66□□□□□ -1.34
CKS1B-201ENST00000308987 NLRP13Q86W25 1043 aa6.66□□□□□ -1.34
CKS1B-201ENST00000308987 FAM20CQ8IXL6 584 aa6.66□□□□□ -1.34
CKS1B-201ENST00000308987 SPON1Q9HCB6 807 aa6.66□□□□□ -1.34
CKS1B-201ENST00000308987 RGPD2P0DJD1 1756 aa6.66□□□□□ -1.34
CKS1B-201ENST00000308987 NINLQ9Y2I6 1382 aa6.66□□□□□ -1.34
CKS1B-201ENST00000308987 WDR64B1ANS9 1081 aa6.65□□□□□ -1.34
CKS1B-201ENST00000308987 TM4SF5O14894 197 aa6.65□□□□□ -1.34
CKS1B-201ENST00000308987 ANP32CO43423 234 aa6.65□□□□□ -1.34
CKS1B-201ENST00000308987 HOXD8P13378 290 aaPredicted RBP6.65□□□□□ -1.34
CKS1B-201ENST00000308987 IGFBP4P22692 258 aa6.65□□□□□ -1.34
CKS1B-201ENST00000308987 C11orf91Q3C1V1 193 aa6.65□□□□□ -1.34
CKS1B-201ENST00000308987 TXNDC11Q6PKC3 985 aa6.65□□□□□ -1.34
CKS1B-201ENST00000308987 CMTR1Q8N1G2 835 aaKnown RBP6.65□□□□□ -1.34
CKS1B-201ENST00000308987 CENPJQ9HC77 1338 aaPredicted RBP6.65□□□□□ -1.35
CKS1B-201ENST00000308987 TONSLQ96HA7 1378 aa6.65□□□□□ -1.35
CKS1B-201ENST00000308987 BCL9O00512 1426 aa6.65□□□□□ -1.35
CKS1B-201ENST00000308987 QSER1Q2KHR3 1735 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 ZBTB7CA1YPR0 619 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 ZBTB7AO95365 584 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 SOX18P35713 384 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 SRPK2P78362 688 aaKnown RBP6.64□□□□□ -1.35
CKS1B-201ENST00000308987 DDX10Q13206 875 aaKnown RBP6.64□□□□□ -1.35
CKS1B-201ENST00000308987 DDB1Q16531 1140 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 BEND4Q6ZU67 534 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 ARHGEF25Q86VW2 580 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 ASIC4Q96FT7 647 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 SIN3AQ96ST3 1273 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 WDR17Q8IZU2 1322 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 BRD4O60885 1362 aaPredicted RBP6.64□□□□□ -1.35
CKS1B-201ENST00000308987 CPSF1Q10570 1443 aaKnown RBP6.64□□□□□ -1.35
CKS1B-201ENST00000308987 SHANK3Q9BYB0 1731 aa6.64□□□□□ -1.35
CKS1B-201ENST00000308987 NEFLP07196 543 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 BMP3P12645 472 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 DUOXA2Q1HG44 320 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 ERICH6BQ5W0A0 696 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 TOM1L2Q6ZVM7 507 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 CBLL1Q75N03 491 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 TTC21BQ7Z4L5 1316 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 RGL4Q8IZJ4 473 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 VTI1AQ96AJ9 217 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 KCNF1Q9H3M0 494 aa6.63□□□□□ -1.35
CKS1B-201ENST00000308987 PPP1R1BQ9UD71 204 aaPredicted RBP6.63□□□□□ -1.35
CKS1B-201ENST00000308987 PCNTO95613 3336 aa6.62□□□□□ -1.35
CKS1B-201ENST00000308987 DDX3YO15523 660 aaKnown RBP6.62□□□□□ -1.35
CKS1B-201ENST00000308987 CDC25BP30305 580 aa6.62□□□□□ -1.35
CKS1B-201ENST00000308987 TXNRD1Q16881 649 aa6.62□□□□□ -1.35
CKS1B-201ENST00000308987 COL26A1Q96A83 441 aa6.62□□□□□ -1.35
CKS1B-201ENST00000308987 CARD10Q9BWT7 1032 aa6.62□□□□□ -1.35
CKS1B-201ENST00000308987 LACRTQ9GZZ8 138 aa6.62□□□□□ -1.35
CKS1B-201ENST00000308987 PIM2Q9P1W9 311 aa6.62□□□□□ -1.35
CKS1B-201ENST00000308987 ANGEL1Q9UNK9 670 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms