RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 USP49Q70CQ1 688 aa23.98■■□□□ 1.43
RELA-201ENST00000308639 CHD4Q14839 1912 aa23.98■■□□□ 1.43
RELA-201ENST00000308639 CUTAO60888 179 aa23.98■■□□□ 1.43
RELA-201ENST00000308639 SYCP1Q15431 976 aa23.98■■□□□ 1.43
RELA-201ENST00000308639 GTPBP4Q9BZE4 634 aaKnown RBP23.98■■□□□ 1.43
RELA-201ENST00000308639 FAM205CA6NFA0 338 aa23.97■■□□□ 1.43
RELA-201ENST00000308639 MMP1P03956 469 aa23.97■■□□□ 1.43
RELA-201ENST00000308639 RTN1Q16799 776 aa23.97■■□□□ 1.43
RELA-201ENST00000308639 TRMT44Q8IYL2 757 aaKnown RBP23.97■■□□□ 1.43
RELA-201ENST00000308639 WTAPQ15007 396 aa23.97■■□□□ 1.43
RELA-201ENST00000308639 KRI1Q8N9T8 703 aaKnown RBP23.97■■□□□ 1.43
RELA-201ENST00000308639 BBXQ8WY36 941 aaPredicted RBP23.97■■□□□ 1.43
RELA-201ENST00000308639 ACSBG1Q96GR2 724 aa23.97■■□□□ 1.43
RELA-201ENST00000308639 INTS13Q9NVM9 706 aa23.97■■□□□ 1.43
RELA-201ENST00000308639 MINDY4BA8MYZ0 360 aa23.97■■□□□ 1.43
RELA-201ENST00000308639 IFNAR1P17181 557 aa23.97■■□□□ 1.43
RELA-201ENST00000308639 IL6STP40189 918 aaPredicted RBP23.97■■□□□ 1.43
RELA-201ENST00000308639 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.97■■□□□ 1.43
RELA-201ENST00000308639 POLR2DO15514 142 aaKnown RBP23.96■■□□□ 1.43
RELA-201ENST00000308639 KIF20AO95235 890 aa23.96■■□□□ 1.43
RELA-201ENST00000308639 SHISA4Q96DD7 197 aa23.96■■□□□ 1.43
RELA-201ENST00000308639 LRP2BPQ9P2M1 347 aa23.96■■□□□ 1.43
RELA-201ENST00000308639 CGNQ9P2M7 1197 aaKnown RBP23.96■■□□□ 1.43
RELA-201ENST00000308639 SERTAD1Q9UHV2 236 aa23.96■■□□□ 1.43
RELA-201ENST00000308639 FAM237AA0A1B0GTK4 181 aa23.96■■□□□ 1.43
RELA-201ENST00000308639 FMR1Q06787 632 aaKnown RBP eCLIP23.96■■□□□ 1.43
RELA-201ENST00000308639 ABCF2Q9UG63 623 aa23.96■■□□□ 1.43
RELA-201ENST00000308639 COL4A1P02462 1669 aa23.95■■□□□ 1.43
RELA-201ENST00000308639 ERVV-1B6SEH8 477 aa23.95■■□□□ 1.42
RELA-201ENST00000308639 FBXO38Q6PIJ6 1188 aa23.95■■□□□ 1.42
RELA-201ENST00000308639 KCND1Q9NSA2 647 aa23.95■■□□□ 1.42
RELA-201ENST00000308639 CYP2D7A0A087X1C5 515 aa23.95■■□□□ 1.42
RELA-201ENST00000308639 OLFM4Q6UX06 510 aa23.95■■□□□ 1.42
RELA-201ENST00000308639 HOMER1Q86YM7 354 aa23.95■■□□□ 1.42
RELA-201ENST00000308639 FBXO2Q9UK22 296 aaPredicted RBP23.95■■□□□ 1.42
RELA-201ENST00000308639 FANCGO15287 622 aa23.94■■□□□ 1.42
RELA-201ENST00000308639 SLU7O95391 586 aaKnown RBP23.94■■□□□ 1.42
RELA-201ENST00000308639 MDM2Q00987 491 aaPredicted RBP23.94■■□□□ 1.42
RELA-201ENST00000308639 UTP14AQ9BVJ6 771 aaKnown RBP23.94■■□□□ 1.42
RELA-201ENST00000308639 KRT23Q9C075 422 aa23.94■■□□□ 1.42
RELA-201ENST00000308639 MAN1B1Q9UKM7 699 aa23.94■■□□□ 1.42
RELA-201ENST00000308639 EXOC5O00471 708 aa23.94■■□□□ 1.42
RELA-201ENST00000308639 STK36Q9NRP7 1315 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 ERCC6LQ2NKX8 1250 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 INTS5Q6P9B9 1019 aaKnown RBP23.93■■□□□ 1.42
RELA-201ENST00000308639 STAG1Q8WVM7 1258 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 CNNM2Q9H8M5 875 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 CABP5Q9NP86 173 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 PRDM1O75626 825 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 SAFBQ15424 915 aaKnown RBP eCLIP23.93■■□□□ 1.42
RELA-201ENST00000308639 TRIM22Q8IYM9 498 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 FAM177A1Q8N128 213 aaPredicted RBP23.93■■□□□ 1.42
RELA-201ENST00000308639 CRACR2BQ8N4Y2 399 aaPredicted RBP23.93■■□□□ 1.42
RELA-201ENST00000308639 ERO1AQ96HE7 468 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 TMX1Q9H3N1 280 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 DNAI1Q9UI46 699 aa23.93■■□□□ 1.42
RELA-201ENST00000308639 LRP5O75197 1615 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 CYP7A1P22680 504 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 CASP1P29466 404 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 EIF5P55010 431 aaKnown RBP23.92■■□□□ 1.42
RELA-201ENST00000308639 EVX2Q03828 476 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 VSTM4Q8IW00 320 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 ZNF654Q8IZM8 581 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 PSDA5PKW4 1024 aaPredicted RBP23.92■■□□□ 1.42
RELA-201ENST00000308639 GYG1P46976 350 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 CHRNDQ07001 517 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 POSTNQ15063 836 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 EARS2Q5JPH6 523 aaKnown RBP23.92■■□□□ 1.42
RELA-201ENST00000308639 NACAP1Q9BZK3 213 aa23.92■■□□□ 1.42
RELA-201ENST00000308639 TOP1P11387 765 aaKnown RBP23.91■■□□□ 1.42
RELA-201ENST00000308639 PPARAQ07869 468 aa23.91■■□□□ 1.42
RELA-201ENST00000308639 MED15Q96RN5 788 aa23.91■■□□□ 1.42
RELA-201ENST00000308639 VPS54Q9P1Q0 977 aa23.91■■□□□ 1.42
RELA-201ENST00000308639 DDX41Q9UJV9 622 aaKnown RBP23.91■■□□□ 1.42
RELA-201ENST00000308639 DOCK2Q92608 1830 aa23.91■■□□□ 1.42
RELA-201ENST00000308639 CRKLP46109 303 aaKnown RBP23.91■■□□□ 1.42
RELA-201ENST00000308639 FANCBQ8NB91 859 aa23.91■■□□□ 1.42
RELA-201ENST00000308639 OGFRQ9NZT2 677 aa23.91■■□□□ 1.42
RELA-201ENST00000308639 DISP2A7MBM2 1401 aa23.91■■□□□ 1.42
RELA-201ENST00000308639 ERICH2A1L162 156 aa23.9■■□□□ 1.42
RELA-201ENST00000308639 WNT7AO00755 349 aa23.9■■□□□ 1.42
RELA-201ENST00000308639 PTPREP23469 700 aa23.9■■□□□ 1.42
RELA-201ENST00000308639 GTF2E1P29083 439 aaPredicted RBP23.9■■□□□ 1.42
RELA-201ENST00000308639 NOM1Q5C9Z4 860 aaKnown RBP23.9■■□□□ 1.42
RELA-201ENST00000308639 FEZ1Q99689 392 aa23.9■■□□□ 1.42
RELA-201ENST00000308639 NIP7Q9Y221 180 aaKnown RBP eCLIP23.9■■□□□ 1.42
RELA-201ENST00000308639 ATP6V1AP38606 617 aa23.9■■□□□ 1.42
RELA-201ENST00000308639 SART3Q15020 963 aaKnown RBP23.9■■□□□ 1.42
RELA-201ENST00000308639 CSRNP2Q9H175 543 aa23.9■■□□□ 1.42
RELA-201ENST00000308639 NFE2L3Q9Y4A8 694 aa23.9■■□□□ 1.42
RELA-201ENST00000308639 RAI14Q9P0K7 980 aa23.89■■□□□ 1.42
RELA-201ENST00000308639 ARAP2Q8WZ64 1704 aa23.89■■□□□ 1.42
RELA-201ENST00000308639 TNKSO95271 1327 aa23.89■■□□□ 1.42
RELA-201ENST00000308639 BAZ2BQ9UIF8 2168 aaKnown RBP23.89■■□□□ 1.41
RELA-201ENST00000308639 IGHMBP2P38935 993 aaKnown RBP23.89■■□□□ 1.41
RELA-201ENST00000308639 DYNLL1P63167 89 aaKnown RBP23.89■■□□□ 1.41
RELA-201ENST00000308639 ZNF397Q8NF99 534 aaPredicted RBP23.89■■□□□ 1.41
RELA-201ENST00000308639 UBAC1Q9BSL1 405 aa23.89■■□□□ 1.41
RELA-201ENST00000308639 SAMSN1Q9NSI8 373 aaKnown RBP23.89■■□□□ 1.41
RELA-201ENST00000308639 ADKP55263 362 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms