RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 WDR78Q5VTH9 848 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 NOSTRINQ8IVI9 506 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 DNAI1Q9UI46 699 aa12.94□□□□□ -0.34
PCDHGC3-201ENST00000308177 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 PLCD1P51178 756 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 CETN1Q12798 172 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 GTPBP4Q9BZE4 634 aaKnown RBP12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 ALDH1B1P30837 517 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 TICAM2Q86XR7 235 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 SYCP3Q8IZU3 236 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 ISCA1Q9BUE6 129 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 TRPC5Q9UL62 973 aaPredicted RBP12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 SEMA3EO15041 775 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 TTLL12Q14166 644 aaPredicted RBP12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 APOA5Q6Q788 366 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 LZTS2Q9BRK4 669 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 RRAGDQ9NQL2 400 aaPredicted RBP12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 ZNF75DP51815 510 aa12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 CGNQ9P2M7 1197 aaKnown RBP12.93□□□□□ -0.34
PCDHGC3-201ENST00000308177 BICDL2A1A5D9 508 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 ARID4AP29374 1257 aaPredicted RBP12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 NLRP12P59046 1061 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 SKIDA1Q1XH10 827 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 FERMT2Q96AC1 680 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 CEMIPQ8WUJ3 1361 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 PAFAH1B1P43034 410 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 MLKLQ8NB16 471 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 BTBD18B2RXH4 712 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 CYP19A1P11511 503 aaPredicted RBP12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 RASGRF1Q13972 1273 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 JAKMIP3Q5VZ66 844 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 PPP4R3AQ6IN85 833 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 CLEC4GQ6UXB4 293 aa12.92□□□□□ -0.34
PCDHGC3-201ENST00000308177 CYLC1P35663 651 aaPredicted RBP12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 MCAMP43121 646 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 DNA2P51530 1060 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 PIH1D3Q9NQM4 214 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 ATP8A2Q9NTI2 1148 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 PCP11498 1178 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 PFKFB1P16118 471 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 NONOQ15233 471 aaKnown RBP eCLIP12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 PCDHA7Q9UN72 937 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 GOLGA6L10A6NI86 522 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 TRIM28Q13263 835 aaKnown RBP12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 CCDC102AQ96A19 550 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 ALS2CR12Q96Q35 445 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 LEMD3Q9Y2U8 911 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 CCDC175P0C221 793 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 FANCCQ00597 558 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 POSTNQ15063 836 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 KRT25Q7Z3Z0 450 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 PNMA1Q8ND90 353 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 SPAG5Q96R06 1193 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 XDHP47989 1333 aa12.91□□□□□ -0.34
PCDHGC3-201ENST00000308177 FSD2A1L4K1 749 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 PRKAB2O43741 272 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 TUBB4AP04350 444 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 UBXN1Q04323 297 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 KIF2CQ99661 725 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 COL3A1P02461 1466 aaPredicted RBP12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 CARMIL3Q8ND23 1372 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 CMA1P23946 247 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 POLD1P28340 1107 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 SLC1A4P43007 532 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 SLFNL1Q499Z3 407 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 SV2BQ7L1I2 683 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 EHBP1Q8NDI1 1231 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 ZSWIM4Q9H7M6 989 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 QTRT2Q9H974 415 aaKnown RBP12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 CDHR2Q9BYE9 1310 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 PDE6BP35913 854 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 FAM193AP78312 1265 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 LCORLQ8N3X6 602 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 MMRN2Q9H8L6 949 aa12.9□□□□□ -0.34
PCDHGC3-201ENST00000308177 FOXO4P98177 505 aa12.9□□□□□ -0.35
PCDHGC3-201ENST00000308177 TCP10Q12799 353 aa12.9□□□□□ -0.35
PCDHGC3-201ENST00000308177 USP40Q9NVE5 1235 aa12.9□□□□□ -0.35
PCDHGC3-201ENST00000308177 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.35
PCDHGC3-201ENST00000308177 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 TXKP42681 527 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 LEKR1Q6ZMV7 388 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 CRACR2AQ9BSW2 395 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 DNAJC5Q9H3Z4 198 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 NFE2L3Q9Y4A8 694 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 DYNLL1P63167 89 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 TEKT1Q969V4 418 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 RTEL1Q9NZ71 1219 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms