RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 WDHD1O75717 1129 aaPredicted RBP9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 LDHBP07195 334 aaKnown RBP9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 PHKA1P46020 1223 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 NFIAQ12857 509 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 SNAPC2Q13487 334 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 KLHL40Q2TBA0 621 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 SLC4A8Q2Y0W8 1093 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 DCAF15Q66K64 600 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 CDC42EP5Q6NZY7 148 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 HHIPL2Q6UWX4 724 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 ERO1BQ86YB8 467 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 ZFPM1Q8IX07 1006 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 ZNF341Q9BYN7 854 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 CPA4Q9UI42 421 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 PTCH2Q9Y6C5 1203 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 ABCB7O75027 752 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 MCCP23508 829 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 CHMLP26374 656 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 ADORA1P30542 326 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 TIMM10P62072 90 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 SLC9C1Q4G0N8 1177 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 ZSCAN29Q8IWY8 852 aaPredicted RBP9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 SH3TC2Q8TF17 1288 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 HOOK2Q96ED9 719 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 MRIQ9BWK5 157 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 ABCF2Q9UG63 623 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 DAGLAQ9Y4D2 1042 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 MAST3O60307 1309 aa9.35□□□□□ -0.91
TM4SF1-201ENST00000305366 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
TM4SF1-201ENST00000305366 KIF22Q14807 665 aa9.34□□□□□ -0.91
TM4SF1-201ENST00000305366 ARHGEF6Q15052 776 aa9.34□□□□□ -0.91
TM4SF1-201ENST00000305366 FAM83AQ86UY5 434 aa9.34□□□□□ -0.91
TM4SF1-201ENST00000305366 FAM151AQ8WW52 585 aa9.34□□□□□ -0.91
TM4SF1-201ENST00000305366 SUGT1Q9Y2Z0 365 aa9.34□□□□□ -0.91
TM4SF1-201ENST00000305366 PICALMQ13492 652 aa9.33□□□□□ -0.92
TM4SF1-201ENST00000305366 CUL4AQ13619 759 aa9.33□□□□□ -0.92
TM4SF1-201ENST00000305366 HSP90AB4PQ58FF6 505 aa9.33□□□□□ -0.92
TM4SF1-201ENST00000305366 NBPF11Q86T75 865 aa9.33□□□□□ -0.92
TM4SF1-201ENST00000305366 NEUROD6Q96NK8 337 aa9.33□□□□□ -0.92
TM4SF1-201ENST00000305366 MYH3P11055 1940 aa9.33□□□□□ -0.92
TM4SF1-201ENST00000305366 AKAP11Q9UKA4 1901 aa9.33□□□□□ -0.92
TM4SF1-201ENST00000305366 PSME4Q14997 1843 aa9.33□□□□□ -0.92
TM4SF1-201ENST00000305366 PDHXO00330 501 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 TLR2O60603 784 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 FMNL1O95466 1100 aaPredicted RBP9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 IL15P40933 162 aaPredicted RBP9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 EVX2Q03828 476 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 TFCP2Q12800 502 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 PPIL2Q13356 520 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 MTX1Q13505 466 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 CCDC102BQ68D86 513 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 KIF1BPQ96EK5 621 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 INTS4Q96HW7 963 aaKnown RBP9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 PANK2Q9BZ23 570 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 FAM198AQ9UFP1 575 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 DENND2AQ9ULE3 1009 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 SRGAP3O43295 1099 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 CIAO1O76071 339 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 PSMC4P43686 418 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 LACTBP83111 547 aaPredicted RBP9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 PPATQ06203 517 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 GORABQ5T7V8 394 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 FKBP1CQ5VVH2 108 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 GAS2L3Q86XJ1 694 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 DZIP1Q86YF9 867 aaKnown RBP9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 ARMC5Q96C12 935 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 BIN2Q9UBW5 565 aaPredicted RBP9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 HDAC5Q9UQL6 1122 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 ZHX2Q9Y6X8 837 aa9.32□□□□□ -0.92
TM4SF1-201ENST00000305366 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 TNRC18O15417 2968 aaPredicted RBP9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 CYP2C8P10632 490 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 NEK4P51957 841 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 ZNF445P59923 1031 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 TSHZ3Q63HK5 1081 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 GADL1Q6ZQY3 521 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 TICAM2Q86XR7 235 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 ZGPATQ8N5A5 531 aaKnown RBP9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 PI4K2BQ8TCG2 481 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 RHPN1Q8TCX5 695 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 RILPL2Q969X0 211 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 TMX3Q96JJ7 454 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 ZNF333Q96JL9 665 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 PICK1Q9NRD5 415 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 LMBRD1Q9NUN5 540 aa9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 DDX49Q9Y6V7 483 aaKnown RBP9.31□□□□□ -0.92
TM4SF1-201ENST00000305366 ZNF646O15015 1829 aaPredicted RBP9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 SURF6O75683 361 aaKnown RBP9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 CTGFP29279 349 aa9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 RASGRF1Q13972 1273 aa9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 CCDC84Q86UT8 332 aaPredicted RBP9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 RAET1EQ8TD07 263 aa9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 XAGE2Q96GT9 111 aa9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 RRAGDQ9NQL2 400 aaPredicted RBP9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 ZDHHC9Q9Y397 364 aa9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 TTC41PQ6P2S7 1318 aa9.3□□□□□ -0.92
TM4SF1-201ENST00000305366 A0A1B0GUL7 405 aa9.29□□□□□ -0.92
TM4SF1-201ENST00000305366 POTEMA6NI47 508 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 1575.6 ms