RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MAPK8IP1Q9UQF2 711 aa14.75□□□□□ -0.05
TRIM35-201ENST00000305364 GPAA1O43292 621 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 COBLO75128 1261 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 PPP6R2O75170 966 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 ZNF790Q6PG37 636 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 PRDM11Q9NQV5 511 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 CTNND2Q9UQB3 1225 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 ZNF609O15014 1411 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 DLC1Q96QB1 1528 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 GOLGA6BA6NDN3 693 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 BTBD18B2RXH4 712 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 VSNL1P62760 191 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 BCAS4Q8TDM0 211 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 SH3TC1Q8TE82 1336 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 CCDC196A0A1B0GTZ2 297 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 PATL2C9JE40 543 aaKnown RBP14.74□□□□□ -0.05
TRIM35-201ENST00000305364 TULP1O00294 542 aaPredicted RBP14.74□□□□□ -0.05
TRIM35-201ENST00000305364 EXOSC10Q01780 885 aaKnown RBP14.74□□□□□ -0.05
TRIM35-201ENST00000305364 SHC4Q6S5L8 630 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 TAB2Q9NYJ8 693 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 GOLGA6L10A6NI86 522 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 NDUFAB1O14561 156 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 KRT86O43790 486 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 TRIM21P19474 475 aaKnown RBP14.74□□□□□ -0.05
TRIM35-201ENST00000305364 EFCAB13Q8IY85 973 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 PSD3Q9NYI0 1048 aa14.74□□□□□ -0.05
TRIM35-201ENST00000305364 SPAG1Q07617 926 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 RTN1Q16799 776 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 TC2NQ8N9U0 490 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 NACAP1Q9BZK3 213 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 LUC7L2Q9Y383 392 aaKnown RBP14.73□□□□□ -0.05
TRIM35-201ENST00000305364 NPHP4O75161 1426 aaPredicted RBP14.73□□□□□ -0.05
TRIM35-201ENST00000305364 TRIM75PA6NK02 468 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 M0R2C6 588 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 PPFIA4O75335 1185 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 PAFAH1B1P43034 410 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 RILPL1Q5EBL4 403 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 TTC19Q6DKK2 380 aaPredicted RBP14.73□□□□□ -0.05
TRIM35-201ENST00000305364 ENOX1Q8TC92 643 aaKnown RBP14.73□□□□□ -0.05
TRIM35-201ENST00000305364 ZKSCAN3Q9BRR0 538 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 ADGRG1Q9Y653 693 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 MACROD2A1Z1Q3 448 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 G3V3G9 751 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 HSF2BPO75031 334 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 DCAF8Q5TAQ9 597 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 TOM1L2Q6ZVM7 507 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 EHBP1Q8NDI1 1231 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 OSBP2Q969R2 916 aa14.73□□□□□ -0.05
TRIM35-201ENST00000305364 EYA2O00167 538 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 TEX33O43247 280 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 SMYD4Q8IYR2 804 aaPredicted RBP14.72□□□□□ -0.05
TRIM35-201ENST00000305364 ODF2Q5BJF6 829 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 CT47A1Q5JQC4 288 aaPredicted RBP14.72□□□□□ -0.05
TRIM35-201ENST00000305364 SND1Q7KZF4 910 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRIM35-201ENST00000305364 METTL16Q86W50 562 aaKnown RBP14.72□□□□□ -0.05
TRIM35-201ENST00000305364 APPBP2Q92624 585 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 SAR1BQ9Y6B6 198 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 MROH7-TTC4A0A0A0MT08 1334 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 A0A087WUV0 522 aaPredicted RBP14.72□□□□□ -0.05
TRIM35-201ENST00000305364 LOC102724159A0A0B4J2E5 919 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 OPA1O60313 960 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 MAP2K2P36507 400 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 PLCD1P51178 756 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 PWP2Q15269 919 aaKnown RBP14.72□□□□□ -0.05
TRIM35-201ENST00000305364 FAM53CQ9NYF3 392 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 NRKQ7Z2Y5 1582 aa14.72□□□□□ -0.05
TRIM35-201ENST00000305364 NUTM2BA6NNL0 878 aaPredicted RBP14.71□□□□□ -0.05
TRIM35-201ENST00000305364 MINDY4BA8MYZ0 360 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 NUTM2EB1AL46 878 aaPredicted RBP14.71□□□□□ -0.05
TRIM35-201ENST00000305364 IDEP14735 1019 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 CYLC1P35663 651 aaPredicted RBP14.71□□□□□ -0.05
TRIM35-201ENST00000305364 PDE4BQ07343 736 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 MICALCLQ6ZW33 695 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 ILDR1Q86SU0 546 aaPredicted RBP14.71□□□□□ -0.05
TRIM35-201ENST00000305364 NOSTRINQ8IVI9 506 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 ATRIPQ8WXE1 791 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 GNL3LQ9NVN8 582 aaKnown RBP14.71□□□□□ -0.05
TRIM35-201ENST00000305364 MTMR7Q9Y216 660 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 USO1O60763 962 aaKnown RBP14.71□□□□□ -0.05
TRIM35-201ENST00000305364 IFIT5Q13325 482 aaKnown RBP14.71□□□□□ -0.05
TRIM35-201ENST00000305364 CCDC96Q2M329 555 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 PNKPQ96T60 521 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 TUBE1Q9UJT0 475 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 ERBB3P21860 1342 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 PPARDQ03181 441 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 WTAPQ15007 396 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 LRRC24Q50LG9 513 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 SPATA1Q5VX52 437 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 FOXR1Q6PIV2 292 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 GBP6Q6ZN66 633 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 MFSD6Q6ZSS7 791 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 RSRC2Q7L4I2 434 aaKnown RBP14.71□□□□□ -0.05
TRIM35-201ENST00000305364 TADA2BQ86TJ2 420 aa14.71□□□□□ -0.05
TRIM35-201ENST00000305364 OVOS2A0A0J9YW53 1432 aa14.71□□□□□ -0.06
TRIM35-201ENST00000305364 OVOS2Q6IE36 1432 aa14.71□□□□□ -0.06
TRIM35-201ENST00000305364 GNGT1P63211 74 aa14.71□□□□□ -0.06
TRIM35-201ENST00000305364 KRT83P78385 493 aa14.71□□□□□ -0.06
TRIM35-201ENST00000305364 BEND6Q5SZJ8 279 aaPredicted RBP14.71□□□□□ -0.06
TRIM35-201ENST00000305364 CMTR1Q8N1G2 835 aaKnown RBP14.71□□□□□ -0.06
TRIM35-201ENST00000305364 KAZALD1Q96I82 304 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms