RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 BOLA2Q9H3K6 86 aa32.08■■■□□ 2.73
CDKN2A-201ENST00000304494 PAG1Q9NWQ8 432 aa32.08■■■□□ 2.73
CDKN2A-201ENST00000304494 AFG3L2Q9Y4W6 797 aa32.08■■■□□ 2.73
CDKN2A-201ENST00000304494 SMARCA5O60264 1052 aaPredicted RBP32.07■■■□□ 2.72
CDKN2A-201ENST00000304494 USP5P45974 858 aa32.07■■■□□ 2.72
CDKN2A-201ENST00000304494 FBXO46Q6PJ61 603 aaPredicted RBP32.07■■■□□ 2.72
CDKN2A-201ENST00000304494 FOXP4Q8IVH2 680 aaPredicted RBP32.07■■■□□ 2.72
CDKN2A-201ENST00000304494 TRIM34Q9BYJ4 488 aa32.07■■■□□ 2.72
CDKN2A-201ENST00000304494 CDK5RAP2Q96SN8 1893 aa32.06■■■□□ 2.72
CDKN2A-201ENST00000304494 TLR2O60603 784 aa32.06■■■□□ 2.72
CDKN2A-201ENST00000304494 HLA-DOAP06340 250 aa32.06■■■□□ 2.72
CDKN2A-201ENST00000304494 PDE6AP16499 860 aa32.06■■■□□ 2.72
CDKN2A-201ENST00000304494 FASTKD5Q7L8L6 764 aaKnown RBP32.06■■■□□ 2.72
CDKN2A-201ENST00000304494 HAUS7Q99871 368 aa32.06■■■□□ 2.72
CDKN2A-201ENST00000304494 PALD1Q9ULE6 856 aa32.06■■■□□ 2.72
CDKN2A-201ENST00000304494 TRIM17Q9Y577 477 aa32.06■■■□□ 2.72
CDKN2A-201ENST00000304494 A0A0G2JLL6 359 aaPredicted RBP32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 PDHXO00330 501 aa32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 CAP2P40123 477 aa32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 MOGSQ13724 837 aa32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 PRRT2Q7Z6L0 340 aaPredicted RBP32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 METTL16Q86W50 562 aaKnown RBP32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 CRACR2BQ8N4Y2 399 aaPredicted RBP32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 CD99L2Q8TCZ2 262 aa32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 TBC1D2Q9BYX2 928 aa32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 SAP30BPQ9UHR5 308 aaKnown RBP32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 HPS5Q9UPZ3 1129 aa32.05■■■□□ 2.72
CDKN2A-201ENST00000304494 MAGEB6P1A0A0J9YX57 407 aa32.04■■■□□ 2.72
CDKN2A-201ENST00000304494 ARHGEF6Q15052 776 aa32.04■■■□□ 2.72
CDKN2A-201ENST00000304494 PCDHB15Q9Y5E8 787 aa32.04■■■□□ 2.72
CDKN2A-201ENST00000304494 OTOP1Q7RTM1 612 aa32.03■■■□□ 2.72
CDKN2A-201ENST00000304494 EDC3Q96F86 508 aaKnown RBP32.03■■■□□ 2.72
CDKN2A-201ENST00000304494 GPATCH3Q96I76 525 aa32.03■■■□□ 2.72
CDKN2A-201ENST00000304494 RIOK1Q9BRS2 568 aaKnown RBP32.03■■■□□ 2.72
CDKN2A-201ENST00000304494 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.03■■■□□ 2.72
CDKN2A-201ENST00000304494 ZNF532Q9HCE3 1301 aa32.02■■■□□ 2.72
CDKN2A-201ENST00000304494 ECHDC1Q9NTX5 307 aa32.02■■■□□ 2.72
CDKN2A-201ENST00000304494 TRIM75PA6NK02 468 aa32.01■■■□□ 2.71
CDKN2A-201ENST00000304494 CRBNQ96SW2 442 aa32.01■■■□□ 2.71
CDKN2A-201ENST00000304494 EFCC1Q9HA90 598 aa32.01■■■□□ 2.71
CDKN2A-201ENST00000304494 SIPA1L1O43166 1804 aa32■■■□□ 2.71
CDKN2A-201ENST00000304494 TCRBV5S4A2TA0A5A2 114 aa32■■■□□ 2.71
CDKN2A-201ENST00000304494 PARK7Q99497 189 aaKnown RBP32■■■□□ 2.71
CDKN2A-201ENST00000304494 CRNKL1Q9BZJ0 848 aaKnown RBP32■■■□□ 2.71
CDKN2A-201ENST00000304494 FRMD4AQ9P2Q2 1039 aaPredicted RBP32■■■□□ 2.71
CDKN2A-201ENST00000304494 USP17L5A8MUK1 530 aa31.99■■■□□ 2.71
CDKN2A-201ENST00000304494 GPAT2Q6NUI2 795 aa31.99■■■□□ 2.71
CDKN2A-201ENST00000304494 GADL1Q6ZQY3 521 aa31.99■■■□□ 2.71
CDKN2A-201ENST00000304494 DNAJC18Q9H819 358 aa31.99■■■□□ 2.71
CDKN2A-201ENST00000304494 AS3MTQ9HBK9 375 aa31.99■■■□□ 2.71
CDKN2A-201ENST00000304494 SLC45A1Q9Y2W3 748 aa31.99■■■□□ 2.71
CDKN2A-201ENST00000304494 PHIPQ8WWQ0 1821 aa31.98■■■□□ 2.71
CDKN2A-201ENST00000304494 ASNSP08243 561 aa31.98■■■□□ 2.71
CDKN2A-201ENST00000304494 RRP1BQ14684 758 aaKnown RBP31.98■■■□□ 2.71
CDKN2A-201ENST00000304494 KIF22Q14807 665 aa31.98■■■□□ 2.71
CDKN2A-201ENST00000304494 TTC6Q86TZ1 520 aa31.98■■■□□ 2.71
CDKN2A-201ENST00000304494 CCDC84Q86UT8 332 aaPredicted RBP31.98■■■□□ 2.71
CDKN2A-201ENST00000304494 ZNF280CQ8ND82 737 aa31.98■■■□□ 2.71
CDKN2A-201ENST00000304494 GINM1Q9NU53 330 aa31.98■■■□□ 2.71
CDKN2A-201ENST00000304494 ADD2P35612 726 aa31.97■■■□□ 2.71
CDKN2A-201ENST00000304494 ZSCAN25Q6NSZ9 544 aa31.97■■■□□ 2.71
CDKN2A-201ENST00000304494 EHD4Q9H223 541 aa31.97■■■□□ 2.71
CDKN2A-201ENST00000304494 ATAD5Q96QE3 1844 aa31.96■■■□□ 2.71
CDKN2A-201ENST00000304494 SPP2Q13103 211 aa31.96■■■□□ 2.71
CDKN2A-201ENST00000304494 SLC4A8Q2Y0W8 1093 aa31.96■■■□□ 2.71
CDKN2A-201ENST00000304494 C17orf99Q6UX52 265 aa31.96■■■□□ 2.71
CDKN2A-201ENST00000304494 SERPINB13Q9UIV8 391 aa31.96■■■□□ 2.71
CDKN2A-201ENST00000304494 PTPN22Q9Y2R2 807 aa31.96■■■□□ 2.71
CDKN2A-201ENST00000304494 LACTBP83111 547 aaPredicted RBP31.95■■■□□ 2.71
CDKN2A-201ENST00000304494 CPA4Q9UI42 421 aa31.95■■■□□ 2.71
CDKN2A-201ENST00000304494 MYH1P12882 1939 aa31.94■■■□□ 2.7
CDKN2A-201ENST00000304494 AAMPQ13685 434 aa31.94■■■□□ 2.7
CDKN2A-201ENST00000304494 UBE3CQ15386 1083 aa31.94■■■□□ 2.7
CDKN2A-201ENST00000304494 PROCA1Q8NCQ7 364 aaPredicted RBP31.94■■■□□ 2.7
CDKN2A-201ENST00000304494 AGTPBP1Q9UPW5 1226 aa31.94■■■□□ 2.7
CDKN2A-201ENST00000304494 ADGRA2Q96PE1 1338 aa31.94■■■□□ 2.7
CDKN2A-201ENST00000304494 RGS19P49795 217 aa31.93■■■□□ 2.7
CDKN2A-201ENST00000304494 LCORLQ8N3X6 602 aa31.93■■■□□ 2.7
CDKN2A-201ENST00000304494 WDR18Q9BV38 432 aa31.93■■■□□ 2.7
CDKN2A-201ENST00000304494 PTPRFP10586 1907 aa31.92■■■□□ 2.7
CDKN2A-201ENST00000304494 POLR3DP05423 398 aaPredicted RBP31.92■■■□□ 2.7
CDKN2A-201ENST00000304494 CYP2C8P10632 490 aa31.92■■■□□ 2.7
CDKN2A-201ENST00000304494 GNRH1P01148 92 aa31.91■■■□□ 2.7
CDKN2A-201ENST00000304494 CAP1Q01518 475 aa31.91■■■□□ 2.7
CDKN2A-201ENST00000304494 TATDN1Q6P1N9 297 aa31.91■■■□□ 2.7
CDKN2A-201ENST00000304494 MCM9Q9NXL9 1143 aa31.91■■■□□ 2.7
CDKN2A-201ENST00000304494 PNMA3Q9UL41 463 aa31.91■■■□□ 2.7
CDKN2A-201ENST00000304494 ZBTB21Q9ULJ3 1066 aa31.91■■■□□ 2.7
CDKN2A-201ENST00000304494 GDF11O95390 407 aa31.9■■■□□ 2.7
CDKN2A-201ENST00000304494 ARMT1Q9H993 441 aa31.9■■■□□ 2.7
CDKN2A-201ENST00000304494 ZBTB47Q9UFB7 747 aaPredicted RBP31.9■■■□□ 2.7
CDKN2A-201ENST00000304494 TTC41PQ6P2S7 1318 aa31.9■■■□□ 2.7
CDKN2A-201ENST00000304494 DDX60LQ5H9U9 1706 aaKnown RBP31.89■■■□□ 2.7
CDKN2A-201ENST00000304494 NAV1Q8NEY1 1877 aa31.89■■■□□ 2.7
CDKN2A-201ENST00000304494 MBD4O95243 580 aa31.89■■■□□ 2.7
CDKN2A-201ENST00000304494 HMGCS2P54868 508 aa31.89■■■□□ 2.7
CDKN2A-201ENST00000304494 PABPC4Q13310 644 aaKnown RBP eCLIP31.89■■■□□ 2.7
CDKN2A-201ENST00000304494 SH3D19Q5HYK7 790 aa31.89■■■□□ 2.7
CDKN2A-201ENST00000304494 SDR42E1Q8WUS8 393 aa31.89■■■□□ 2.7
CDKN2A-201ENST00000304494 PLCD1P51178 756 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms