RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 FOXP4Q8IVH2 680 aaPredicted RBP20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 SCYL3Q8IZE3 742 aa20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 CRACR2BQ8N4Y2 399 aaPredicted RBP20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 DDRGK1Q96HY6 314 aa20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 PRDM10Q9NQV6 1147 aa20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 PICK1Q9NRD5 415 aa20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 SIPA1L1O43166 1804 aa20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 ATAD5Q96QE3 1844 aa20.39■□□□□ 0.85
NDUFA3-201ENST00000303553 PHF20L1A8MW92 1017 aa20.38■□□□□ 0.85
NDUFA3-201ENST00000303553 HSPA8P11142 646 aaKnown RBP20.38■□□□□ 0.85
NDUFA3-201ENST00000303553 TTC6Q86TZ1 520 aa20.38■□□□□ 0.85
NDUFA3-201ENST00000303553 FSD1Q9BTV5 496 aa20.38■□□□□ 0.85
NDUFA3-201ENST00000303553 RNF186Q9NXI6 227 aa20.38■□□□□ 0.85
NDUFA3-201ENST00000303553 PALD1Q9ULE6 856 aa20.38■□□□□ 0.85
NDUFA3-201ENST00000303553 MBD4O95243 580 aa20.37■□□□□ 0.85
NDUFA3-201ENST00000303553 GJA5P36382 358 aa20.37■□□□□ 0.85
NDUFA3-201ENST00000303553 LCORLQ8N3X6 602 aa20.37■□□□□ 0.85
NDUFA3-201ENST00000303553 APPBP2Q92624 585 aa20.37■□□□□ 0.85
NDUFA3-201ENST00000303553 SAP30BPQ9UHR5 308 aaKnown RBP20.37■□□□□ 0.85
NDUFA3-201ENST00000303553 RNF113AO15541 343 aaKnown RBP20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 TRPA1O75762 1119 aa20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 CETPP11597 493 aa20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 LBX1P52954 281 aa20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 SNAPC2Q13487 334 aa20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 AMOTL1Q8IY63 956 aa20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 EVI5LQ96CN4 794 aa20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 EHD4Q9H223 541 aa20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 ARMT1Q9H993 441 aa20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 ATP8A2Q9NTI2 1148 aa20.36■□□□□ 0.85
NDUFA3-201ENST00000303553 TESPA1A2RU30 521 aaPredicted RBP20.35■□□□□ 0.85
NDUFA3-201ENST00000303553 METTL16Q86W50 562 aaKnown RBP20.35■□□□□ 0.85
NDUFA3-201ENST00000303553 TICAM2Q86XR7 235 aa20.35■□□□□ 0.85
NDUFA3-201ENST00000303553 IFNL1Q8IU54 200 aa20.35■□□□□ 0.85
NDUFA3-201ENST00000303553 CNKSR2Q8WXI2 1034 aa20.35■□□□□ 0.85
NDUFA3-201ENST00000303553 TBC1D2Q9BYX2 928 aa20.35■□□□□ 0.85
NDUFA3-201ENST00000303553 SERPINB13Q9UIV8 391 aa20.35■□□□□ 0.85
NDUFA3-201ENST00000303553 TAOK2Q9UL54 1235 aa20.35■□□□□ 0.85
NDUFA3-201ENST00000303553 CCL15-CCL14A0A0B4J2E2 113 aa20.34■□□□□ 0.85
NDUFA3-201ENST00000303553 IRF6O14896 467 aa20.34■□□□□ 0.85
NDUFA3-201ENST00000303553 POLR3DP05423 398 aaPredicted RBP20.34■□□□□ 0.85
NDUFA3-201ENST00000303553 CCL15Q16663 113 aa20.34■□□□□ 0.85
NDUFA3-201ENST00000303553 MS4A4AQ96JQ5 239 aa20.34■□□□□ 0.85
NDUFA3-201ENST00000303553 DCP1AQ9NPI6 582 aaPredicted RBP20.34■□□□□ 0.85
NDUFA3-201ENST00000303553 GINM1Q9NU53 330 aa20.34■□□□□ 0.85
NDUFA3-201ENST00000303553 MCM9Q9NXL9 1143 aa20.34■□□□□ 0.85
NDUFA3-201ENST00000303553 FAM196BA6NMK8 535 aa20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 PTPRAP18433 802 aa20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 GNAT2P19087 354 aa20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 CAP2P40123 477 aa20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 SDR42E1Q8WUS8 393 aa20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 CFHR5Q9BXR6 569 aa20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 PUS7LQ9H0K6 701 aaKnown RBP20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 OSBPL3Q9H4L5 887 aa20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 TSKSQ9UJT2 592 aa20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 SLC4A4Q9Y6R1 1079 aa20.33■□□□□ 0.85
NDUFA3-201ENST00000303553 SLFNL1Q499Z3 407 aa20.32■□□□□ 0.84
NDUFA3-201ENST00000303553 ZCCHC17Q9NP64 241 aaKnown RBP20.32■□□□□ 0.84
NDUFA3-201ENST00000303553 KCNH4Q9UQ05 1017 aa20.32■□□□□ 0.84
NDUFA3-201ENST00000303553 ZHX2Q9Y6X8 837 aa20.32■□□□□ 0.84
NDUFA3-201ENST00000303553 PHIPQ8WWQ0 1821 aa20.32■□□□□ 0.84
NDUFA3-201ENST00000303553 BAZ2AQ9UIF9 1905 aaKnown RBP20.31■□□□□ 0.84
NDUFA3-201ENST00000303553 CXCL11O14625 94 aa20.31■□□□□ 0.84
NDUFA3-201ENST00000303553 ASNSP08243 561 aa20.31■□□□□ 0.84
NDUFA3-201ENST00000303553 SLC4A8Q2Y0W8 1093 aa20.31■□□□□ 0.84
NDUFA3-201ENST00000303553 PLEKHM2Q8IWE5 1019 aa20.31■□□□□ 0.84
NDUFA3-201ENST00000303553 AS3MTQ9HBK9 375 aa20.31■□□□□ 0.84
NDUFA3-201ENST00000303553 MYH8P13535 1937 aa20.31■□□□□ 0.84
NDUFA3-201ENST00000303553 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 IGF2BP3O00425 579 aaKnown RBP eCLIP20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 CHGBP05060 677 aa20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 CENPBP07199 599 aaPredicted RBP20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 SLURP2P0DP57 97 aa20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 NOM1Q5C9Z4 860 aaKnown RBP20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 BRI3BPQ8WY22 251 aa20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 OSBP2Q969R2 916 aa20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 STRBPQ96SI9 672 aaKnown RBP20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 DNAJC18Q9H819 358 aa20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 ARPP21Q9UBL0 812 aaPredicted RBP20.3■□□□□ 0.84
NDUFA3-201ENST00000303553 PTPRFP10586 1907 aa20.29■□□□□ 0.84
NDUFA3-201ENST00000303553 GPAA1O43292 621 aa20.29■□□□□ 0.84
NDUFA3-201ENST00000303553 NEFLP07196 543 aa20.29■□□□□ 0.84
NDUFA3-201ENST00000303553 GIMAP6Q6P9H5 292 aa20.29■□□□□ 0.84
NDUFA3-201ENST00000303553 USP17L5A8MUK1 530 aa20.28■□□□□ 0.84
NDUFA3-201ENST00000303553 PRKAB2O43741 272 aa20.28■□□□□ 0.84
NDUFA3-201ENST00000303553 PLCD1P51178 756 aa20.28■□□□□ 0.84
NDUFA3-201ENST00000303553 ZMYM1Q5SVZ6 1142 aa20.28■□□□□ 0.84
NDUFA3-201ENST00000303553 TATDN1Q6P1N9 297 aa20.28■□□□□ 0.84
NDUFA3-201ENST00000303553 FASTKD5Q7L8L6 764 aaKnown RBP20.28■□□□□ 0.84
NDUFA3-201ENST00000303553 PTPN18Q99952 460 aa20.28■□□□□ 0.84
NDUFA3-201ENST00000303553 SWAP70Q9UH65 585 aa20.28■□□□□ 0.84
NDUFA3-201ENST00000303553 AFG3L2Q9Y4W6 797 aa20.28■□□□□ 0.84
NDUFA3-201ENST00000303553 TBC1D8O95759 1140 aa20.27■□□□□ 0.84
NDUFA3-201ENST00000303553 COL13A1Q5TAT6 717 aaPredicted RBP20.27■□□□□ 0.84
NDUFA3-201ENST00000303553 ZNF280CQ8ND82 737 aa20.27■□□□□ 0.84
NDUFA3-201ENST00000303553 NACAP1Q9BZK3 213 aa20.27■□□□□ 0.84
NDUFA3-201ENST00000303553 A0A0G2JLL6 359 aaPredicted RBP20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 M0R2C6 588 aa20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 TAF1CQ15572 869 aaPredicted RBP20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 CERKLQ49MI3 558 aaPredicted RBP20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 PRRT2Q7Z6L0 340 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms