RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 FAM212AQ96EL1 285 aa23.57■■□□□ 1.36
LETM1-201ENST00000302787 AFAP1L1Q8TED9 768 aa23.57■■□□□ 1.36
LETM1-201ENST00000302787 IBTKQ9P2D0 1353 aaPredicted RBP23.57■■□□□ 1.36
LETM1-201ENST00000302787 AATFQ9NY61 560 aaKnown RBP eCLIP23.56■■□□□ 1.36
LETM1-201ENST00000302787 A0A0D9SFI3 127 aa23.56■■□□□ 1.36
LETM1-201ENST00000302787 SECISBP2LQ93073 1101 aaKnown RBP23.56■■□□□ 1.36
LETM1-201ENST00000302787 KDRP35968 1356 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 MROH5Q6ZUA9 1318 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 UFL1O94874 794 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 KCNK9Q9NPC2 374 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 PNOCQ13519 176 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 ASIC2Q16515 512 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 SAMD9Q5K651 1589 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 TTC31Q49AM3 519 aaPredicted RBP23.55■■□□□ 1.36
LETM1-201ENST00000302787 HAUS3Q68CZ6 603 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 ADALQ6DHV7 355 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 CCDC114Q96M63 670 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 XPO4Q9C0E2 1151 aaKnown RBP23.55■■□□□ 1.36
LETM1-201ENST00000302787 KRT9P35527 623 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 ZBTB16Q05516 673 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 MYSM1Q5VVJ2 828 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 MAGI2Q86UL8 1455 aa23.55■■□□□ 1.36
LETM1-201ENST00000302787 EIF6P56537 245 aaKnown RBP23.54■■□□□ 1.36
LETM1-201ENST00000302787 NONOQ15233 471 aaKnown RBP eCLIP23.54■■□□□ 1.36
LETM1-201ENST00000302787 ZSWIM6Q9HCJ5 1215 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 SAMD15Q9P1V8 674 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 PLEKHG3A1L390 1219 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 PKP1Q13835 747 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 DPH6Q7L8W6 267 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 TRMT44Q8IYL2 757 aaKnown RBP23.54■■□□□ 1.36
LETM1-201ENST00000302787 TPCN1Q9ULQ1 816 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 TNFAIP3P21580 790 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 LONRF3Q496Y0 759 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 KRBA2Q6ZNG9 492 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 TRMT2AQ8IZ69 625 aaKnown RBP23.54■■□□□ 1.36
LETM1-201ENST00000302787 NELFBQ8WX92 580 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 ZNF274Q96GC6 653 aaPredicted RBP23.54■■□□□ 1.36
LETM1-201ENST00000302787 MTMR6Q9Y217 621 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 UTP14CQ5TAP6 766 aaKnown RBP23.54■■□□□ 1.36
LETM1-201ENST00000302787 PPM1EQ8WY54 764 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 NOX5Q96PH1 765 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 PARP3Q9Y6F1 533 aa23.54■■□□□ 1.36
LETM1-201ENST00000302787 KRT25Q7Z3Z0 450 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 CNBD1Q8NA66 436 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 CALUO43852 315 aaPredicted RBP23.53■■□□□ 1.36
LETM1-201ENST00000302787 TRAPPC3LQ5T215 181 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 NAP1L3Q99457 506 aaPredicted RBP23.53■■□□□ 1.36
LETM1-201ENST00000302787 CEP83Q9Y592 693 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 LRWD1Q9UFC0 647 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 CETN3O15182 167 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 CCDC63Q8NA47 563 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 EAF2Q96CJ1 260 aaPredicted RBP23.53■■□□□ 1.36
LETM1-201ENST00000302787 PKD2L1Q9P0L9 805 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 NR1I2O75469 434 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 C10orf67Q8IYJ2 551 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 IL17REQ8NFR9 667 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 SERTAD1Q9UHV2 236 aa23.53■■□□□ 1.36
LETM1-201ENST00000302787 ATP10AO60312 1499 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 GPT2Q8TD30 523 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 PLEKHF1Q96S99 279 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 SERPINA10Q9UK55 444 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 RGS12O14924 1447 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 CHMP2AO43633 222 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 KCNQ3O43525 872 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 PFKFB1P16118 471 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 RNASE9P60153 205 aaKnown RBP23.52■■□□□ 1.36
LETM1-201ENST00000302787 MSANTD4Q8NCY6 345 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 SNX29Q8TEQ0 813 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 VPS54Q9P1Q0 977 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 KIAA1468Q9P260 1216 aa23.52■■□□□ 1.36
LETM1-201ENST00000302787 TOM1O60784 492 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 GIGYF1O75420 1035 aaPredicted RBP23.51■■□□□ 1.35
LETM1-201ENST00000302787 CEP57Q86XR8 500 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 DNAJC10Q8IXB1 793 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 TFCP2L1Q9NZI6 479 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 BLZF1Q9H2G9 400 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 hCG_1642624A0A1W2PR95 340 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 ADCY7P51828 1080 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 FCHSD1Q86WN1 690 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 WDR66Q8TBY9 1149 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 PFKFB2O60825 505 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 SLC9C1Q4G0N8 1177 aa23.51■■□□□ 1.35
LETM1-201ENST00000302787 BACH1O14867 736 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 KRT5P13647 590 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 SLF1Q9BQI6 1058 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 MAGI3Q5TCQ9 1506 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 SPOPO43791 374 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 SP4Q02446 784 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 BEND3Q5T5X7 828 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 STAMQ92783 540 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 LRRC45Q96CN5 670 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 USP28Q96RU2 1077 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 B4DLN1 442 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 ATP2A2P16615 1042 aaKnown RBP23.5■■□□□ 1.35
LETM1-201ENST00000302787 HPDP32754 393 aaPredicted RBP23.5■■□□□ 1.35
LETM1-201ENST00000302787 GLT8D2Q9H1C3 349 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 KIFAP3Q92845 792 aa23.5■■□□□ 1.35
LETM1-201ENST00000302787 SMC6Q96SB8 1091 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms