RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 WDHD1O75717 1129 aaPredicted RBP15.26■□□□□ 0.03
CCDC7-202ENST00000302316 CCT2P78371 535 aaKnown RBP15.26■□□□□ 0.03
CCDC7-202ENST00000302316 RASSF7Q02833 373 aa15.26■□□□□ 0.03
CCDC7-202ENST00000302316 FHDC1Q9C0D6 1143 aaPredicted RBP15.26■□□□□ 0.03
CCDC7-202ENST00000302316 LY9Q9HBG7 655 aa15.26■□□□□ 0.03
CCDC7-202ENST00000302316 PCDHAC2Q9Y5I4 1007 aa15.26■□□□□ 0.03
CCDC7-202ENST00000302316 DTNBO60941 627 aa15.26■□□□□ 0.03
CCDC7-202ENST00000302316 PLCD1P51178 756 aa15.26■□□□□ 0.03
CCDC7-202ENST00000302316 NFXL1Q6ZNB6 911 aa15.26■□□□□ 0.03
CCDC7-202ENST00000302316 DYNLL2Q96FJ2 89 aa15.26■□□□□ 0.03
CCDC7-202ENST00000302316 MTA3Q9BTC8 594 aa15.26■□□□□ 0.03
CCDC7-202ENST00000302316 MYH1P12882 1939 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 LIFRP42702 1097 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 WTAPQ15007 396 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 TNPO1Q92973 898 aaKnown RBP15.25■□□□□ 0.03
CCDC7-202ENST00000302316 SENP2Q9HC62 589 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 NCOA5Q9HCD5 579 aaKnown RBP15.25■□□□□ 0.03
CCDC7-202ENST00000302316 DDX4Q9NQI0 724 aaKnown RBP15.25■□□□□ 0.03
CCDC7-202ENST00000302316 ECM29Q5VYK3 1845 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 TNKSO95271 1327 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 CCDC69A6NI79 296 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 CXCL9Q07325 125 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 NFKBIBQ15653 356 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 CFAP100Q494V2 611 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 SGMS1Q86VZ5 419 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 IQCA1Q86XH1 822 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 RAB11FIP4Q86YS3 637 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 HDAC9Q9UKV0 1011 aa15.25■□□□□ 0.03
CCDC7-202ENST00000302316 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
CCDC7-202ENST00000302316 NBR1Q14596 966 aa15.24■□□□□ 0.03
CCDC7-202ENST00000302316 CIAPIN1Q6FI81 312 aa15.24■□□□□ 0.03
CCDC7-202ENST00000302316 APOA5Q6Q788 366 aa15.24■□□□□ 0.03
CCDC7-202ENST00000302316 CHMP4CQ96CF2 233 aa15.24■□□□□ 0.03
CCDC7-202ENST00000302316 GMLQ99445 158 aa15.24■□□□□ 0.03
CCDC7-202ENST00000302316 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
CCDC7-202ENST00000302316 TSPY2A6NKD2 308 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 JAK2O60674 1132 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 FAM47AQ5JRC9 791 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 MICU3Q86XE3 530 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 OGFOD1Q8N543 542 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 AGBL3Q8NEM8 1001 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 ZSCAN10Q96SZ4 725 aaPredicted RBP15.23■□□□□ 0.03
CCDC7-202ENST00000302316 LLPHQ9BRT6 129 aaKnown RBP15.23■□□□□ 0.03
CCDC7-202ENST00000302316 OSBPL5Q9H0X9 879 aaPredicted RBP15.23■□□□□ 0.03
CCDC7-202ENST00000302316 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 HPS5Q9UPZ3 1129 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 NT5C2P49902 561 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 METAP2P50579 478 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCDC7-202ENST00000302316 NFIAQ12857 509 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 SLC44A5Q8NCS7 719 aa15.23■□□□□ 0.03
CCDC7-202ENST00000302316 NSUN7Q8NE18 718 aaKnown RBP15.23■□□□□ 0.03
CCDC7-202ENST00000302316 ZBTB43O43298 467 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 BRD1O95696 1058 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 SYT1P21579 422 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 CACNB3P54284 484 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 SEC23AQ15436 765 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 SYNE3Q6ZMZ3 975 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 C16orf86Q6ZW13 317 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 TTC6Q86TZ1 520 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 TMTC2Q8N394 836 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 ZDHHC9Q9Y397 364 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
CCDC7-202ENST00000302316 PTPDC1A2A3K4 754 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 DHX16O60231 1041 aaKnown RBP15.22■□□□□ 0.03
CCDC7-202ENST00000302316 RXRAP19793 462 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 TNIP1Q15025 636 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 FOXD4L5Q5VV16 416 aaPredicted RBP15.22■□□□□ 0.03
CCDC7-202ENST00000302316 ENAHQ8N8S7 591 aaPredicted RBP15.22■□□□□ 0.03
CCDC7-202ENST00000302316 FOXD4L4Q8WXT5 416 aaPredicted RBP15.22■□□□□ 0.03
CCDC7-202ENST00000302316 MYL10Q9BUA6 226 aa15.22■□□□□ 0.03
CCDC7-202ENST00000302316 TDRD3Q9H7E2 651 aaKnown RBP15.22■□□□□ 0.03
CCDC7-202ENST00000302316 GOLGA8AA7E2F4 631 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 CPLX1O14810 134 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 STX6O43752 255 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 CDK8P49336 464 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 PRELPP51888 382 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 HMGN5P82970 282 aaKnown RBP15.21■□□□□ 0.03
CCDC7-202ENST00000302316 TFAP4Q01664 338 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 DLGAP5Q15398 846 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 IFIT1BQ5T764 474 aaKnown RBP15.21■□□□□ 0.03
CCDC7-202ENST00000302316 ZNF444Q8N0Y2 327 aaPredicted RBP15.21■□□□□ 0.03
CCDC7-202ENST00000302316 SMARCC2Q8TAQ2 1214 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 DDX11Q96FC9 970 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 GBP4Q96PP9 640 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 IDI2Q9BXS1 227 aa15.21■□□□□ 0.03
CCDC7-202ENST00000302316 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 HLA-DOAP06340 250 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 TSPY3P0CV98 308 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 TSPY8P0CW00 308 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 PDCP20941 246 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 TCP10Q12799 353 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 FAM184AQ8NB25 1140 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
CCDC7-202ENST00000302316 NMT2O60551 498 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 RASA1P20936 1047 aa15.2■□□□□ 0.02
CCDC7-202ENST00000302316 EIF6P56537 245 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms