RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 USP17L12C9JPN9 530 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 USP17L21D6R901 530 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 H3BQV1 296 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 CPLX1O14810 134 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 HSPA1AP0DMV8 641 aaKnown RBP14.03□□□□□ -0.16
TPM3-202ENST00000302206 HSPA1BP0DMV9 641 aaKnown RBP14.03□□□□□ -0.16
TPM3-202ENST00000302206 METAP2P50579 478 aaKnown RBP eCLIP14.03□□□□□ -0.16
TPM3-202ENST00000302206 RESTQ13127 1097 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 WTAPQ15007 396 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 PPP2R5BQ15173 497 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 ATL3Q6DD88 541 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 SYNE3Q6ZMZ3 975 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 NFXL1Q6ZNB6 911 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 USP48Q86UV5 1035 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 SMC1BQ8NDV3 1235 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 ZNF622Q969S3 477 aaKnown RBP eCLIP14.03□□□□□ -0.163e-8■■□□□ 11.5
TPM3-202ENST00000302206 DDX11Q96FC9 970 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 INCENPQ9NQS7 918 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 JAG2Q9Y219 1238 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 DLEC1Q9Y238 1755 aa14.03□□□□□ -0.16
TPM3-202ENST00000302206 BAZ2AQ9UIF9 1905 aaKnown RBP14.02□□□□□ -0.16
TPM3-202ENST00000302206 MYH2Q9UKX2 1941 aa14.02□□□□□ -0.16
TPM3-202ENST00000302206 ELP1O95163 1332 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 STK36Q9NRP7 1315 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 FSD2A1L4K1 749 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 FDPSP14324 419 aaKnown RBP14.02□□□□□ -0.17
TPM3-202ENST00000302206 FKBP1AP62942 108 aaKnown RBP14.02□□□□□ -0.17
TPM3-202ENST00000302206 KRT85P78386 507 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 SEC23AQ15436 765 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 GRIK5Q16478 980 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 RRP12Q5JTH9 1297 aaKnown RBP14.02□□□□□ -0.17
TPM3-202ENST00000302206 MFSD14BQ5SR56 506 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 C12orf60Q5U649 245 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 AMOTL1Q8IY63 956 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 GPT2Q8TD30 523 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 CHAMP1Q96JM3 812 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 UBAC1Q9BSL1 405 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 TOMM22Q9NS69 142 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 CNPY2Q9Y2B0 182 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 SLC12A7Q9Y666 1083 aa14.02□□□□□ -0.17
TPM3-202ENST00000302206 NAV1Q8NEY1 1877 aa14.01□□□□□ -0.17
TPM3-202ENST00000302206 CCDC196A0A1B0GTZ2 297 aa14.01□□□□□ -0.17
TPM3-202ENST00000302206 GOLGA8AA7E2F4 631 aa14.01□□□□□ -0.17
TPM3-202ENST00000302206 USP5P45974 858 aa14.01□□□□□ -0.17
TPM3-202ENST00000302206 UBE2HP62256 183 aa14.01□□□□□ -0.17
TPM3-202ENST00000302206 DNM1Q05193 864 aaKnown RBP14.01□□□□□ -0.17
TPM3-202ENST00000302206 PDE4BQ07343 736 aa14.01□□□□□ -0.17
TPM3-202ENST00000302206 DIXDC1Q155Q3 683 aa14.01□□□□□ -0.17
TPM3-202ENST00000302206 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
TPM3-202ENST00000302206 PODNQ7Z5L7 613 aa14.01□□□□□ -0.17
TPM3-202ENST00000302206 SH3RF3Q8TEJ3 882 aaPredicted RBP14.01□□□□□ -0.17
TPM3-202ENST00000302206 ZSCAN10Q96SZ4 725 aaPredicted RBP14.01□□□□□ -0.17
TPM3-202ENST00000302206 SCAND2PQ9GZW5 306 aaPredicted RBP14.01□□□□□ -0.17
TPM3-202ENST00000302206 GZF1Q9H116 711 aaPredicted RBP14.01□□□□□ -0.17
TPM3-202ENST00000302206 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
TPM3-202ENST00000302206 ORC3Q9UBD5 711 aaPredicted RBP14.01□□□□□ -0.17
TPM3-202ENST00000302206 SNED1Q8TER0 1413 aa14□□□□□ -0.17
TPM3-202ENST00000302206 RIMBP2O15034 1052 aa14□□□□□ -0.17
TPM3-202ENST00000302206 BTDP43251 543 aa14□□□□□ -0.17
TPM3-202ENST00000302206 ZNF445P59923 1031 aa14□□□□□ -0.17
TPM3-202ENST00000302206 GTF2IP78347 998 aa14□□□□□ -0.17
TPM3-202ENST00000302206 NTRK3Q16288 839 aa14□□□□□ -0.17
TPM3-202ENST00000302206 CCDC178Q5BJE1 867 aa14□□□□□ -0.17
TPM3-202ENST00000302206 IQCA1Q86XH1 822 aa14□□□□□ -0.17
TPM3-202ENST00000302206 SUPT20HQ8NEM7 779 aa14□□□□□ -0.17
TPM3-202ENST00000302206 C7orf43Q8WVR3 580 aa14□□□□□ -0.17
TPM3-202ENST00000302206 SYAP1Q96A49 352 aaPredicted RBP14□□□□□ -0.17
TPM3-202ENST00000302206 SENP2Q9HC62 589 aa14□□□□□ -0.17
TPM3-202ENST00000302206 FAM217BQ9NTX9 383 aaPredicted RBP14□□□□□ -0.17
TPM3-202ENST00000302206 MCM9Q9NXL9 1143 aa14□□□□□ -0.17
TPM3-202ENST00000302206 RNF181Q9P0P0 153 aa14□□□□□ -0.17
TPM3-202ENST00000302206 DDX60LQ5H9U9 1706 aaKnown RBP14□□□□□ -0.17
TPM3-202ENST00000302206 SLX4Q8IY92 1834 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 TNKSO95271 1327 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 CYP2D7A0A087X1C5 515 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 GOLGA6L3A6NEY3 463 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 DTNBO60941 627 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 CALM1P0DP23 149 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 CALM2P0DP24 149 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 CALM3P0DP25 149 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 IFNAR1P17181 557 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 KCNA3P22001 575 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 FERMT3Q86UX7 667 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 ZNF654Q8IZM8 581 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 MRIQ9BWK5 157 aa13.99□□□□□ -0.17
TPM3-202ENST00000302206 TCHHQ07283 1943 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 SBF1O95248 1867 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 CDK5RAP2Q96SN8 1893 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 G3V3G9 751 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
TPM3-202ENST00000302206 DDAH1O94760 285 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 FMNL1O95466 1100 aaPredicted RBP13.98□□□□□ -0.17
TPM3-202ENST00000302206 CDC27P30260 824 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 ADD1P35611 737 aaKnown RBP13.98□□□□□ -0.17
TPM3-202ENST00000302206 RHBDL3P58872 404 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 RTN1Q16799 776 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 FOXD4L6Q3SYB3 417 aaPredicted RBP13.98□□□□□ -0.17
TPM3-202ENST00000302206 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 HHIPL2Q6UWX4 724 aa13.98□□□□□ -0.17
TPM3-202ENST00000302206 FOXD4L3Q6VB84 417 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms