RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 BCL9LQ86UU0 1499 aa16.02■□□□□ 0.15
SDC2-201ENST00000302190 TRIM75PA6NK02 468 aa16.02■□□□□ 0.15
SDC2-201ENST00000302190 NLRP12P59046 1061 aa16.02■□□□□ 0.15
SDC2-201ENST00000302190 ERO1AQ96HE7 468 aa16.02■□□□□ 0.15
SDC2-201ENST00000302190 NR5A1Q13285 461 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 TCIRG1Q13488 830 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 ZNF569Q5MCW4 686 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 SMYD4Q8IYR2 804 aaPredicted RBP16.01■□□□□ 0.15
SDC2-201ENST00000302190 EPC1Q9H2F5 836 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 ERVV-2B6SEH9 535 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
SDC2-201ENST00000302190 CDK5RAP3Q96JB5 506 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 BLZF1Q9H2G9 400 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 ZNHIT6Q9NWK9 470 aaKnown RBP16.01■□□□□ 0.15
SDC2-201ENST00000302190 WWC3Q9ULE0 1092 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 MRFAP1L1Q96HT8 127 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 ZBTB1Q9Y2K1 713 aa16.01■□□□□ 0.15
SDC2-201ENST00000302190 BCAMP50895 628 aa16■□□□□ 0.15
SDC2-201ENST00000302190 NOM1Q5C9Z4 860 aaKnown RBP16■□□□□ 0.15
SDC2-201ENST00000302190 RNF41Q9H4P4 317 aaPredicted RBP16■□□□□ 0.15
SDC2-201ENST00000302190 IDEP14735 1019 aa16■□□□□ 0.15
SDC2-201ENST00000302190 CASP1P29466 404 aa16■□□□□ 0.15
SDC2-201ENST00000302190 CCDC70Q6NSX1 233 aa16■□□□□ 0.15
SDC2-201ENST00000302190 UQCRFS1P1P0C7P4 283 aa16■□□□□ 0.15
SDC2-201ENST00000302190 PDE6AP16499 860 aa16■□□□□ 0.15
SDC2-201ENST00000302190 SEPT12Q8IYM1 358 aa16■□□□□ 0.15
SDC2-201ENST00000302190 GJD4Q96KN9 370 aaPredicted RBP16■□□□□ 0.15
SDC2-201ENST00000302190 CAPZA3Q96KX2 299 aa16■□□□□ 0.15
SDC2-201ENST00000302190 GDAP1L1Q96MZ0 367 aa16■□□□□ 0.15
SDC2-201ENST00000302190 CENPHQ9H3R5 247 aa16■□□□□ 0.15
SDC2-201ENST00000302190 CCDC194A0A1B0GVG4 234 aa15.99■□□□□ 0.15
SDC2-201ENST00000302190 DZIP1Q86YF9 867 aaKnown RBP15.99■□□□□ 0.15
SDC2-201ENST00000302190 ESR2Q92731 530 aa15.99■□□□□ 0.15
SDC2-201ENST00000302190 ARFGAP3Q9NP61 516 aa15.99■□□□□ 0.15
SDC2-201ENST00000302190 GUCA1BQ9UMX6 200 aa15.99■□□□□ 0.15
SDC2-201ENST00000302190 FAM170AA1A519 330 aa15.99■□□□□ 0.15
SDC2-201ENST00000302190 IKQ13123 557 aaPredicted RBP15.99■□□□□ 0.15
SDC2-201ENST00000302190 YEATS4O95619 227 aa15.99■□□□□ 0.15
SDC2-201ENST00000302190 UBA7P41226 1012 aa15.99■□□□□ 0.15
SDC2-201ENST00000302190 LEKR1Q6ZMV7 388 aa15.99■□□□□ 0.15
SDC2-201ENST00000302190 KRT23Q9C075 422 aa15.99■□□□□ 0.15
SDC2-201ENST00000302190 CDC25AP30304 524 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 GABPB1Q06547 395 aaPredicted RBP15.98■□□□□ 0.15
SDC2-201ENST00000302190 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 UBE2Q2LH0YL09 131 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 SEC31AO94979 1220 aaKnown RBP15.98■□□□□ 0.15
SDC2-201ENST00000302190 APOA5Q6Q788 366 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 RUFY1Q96T51 708 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 HEG1Q9ULI3 1381 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 ZNF609O15014 1411 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 STIM1Q13586 685 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 IGSF22Q8N9C0 903 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 RTEL1Q9NZ71 1219 aa15.98■□□□□ 0.15
SDC2-201ENST00000302190 KIF23Q02241 960 aaPredicted RBP15.97■□□□□ 0.15
SDC2-201ENST00000302190 SEC31BQ9NQW1 1179 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 FOXN1O15353 648 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 POSTNQ15063 836 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 HLFQ16534 295 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 ATL3Q6DD88 541 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 PPP1R13BQ96KQ4 1090 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 PLCH1Q4KWH8 1693 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 TMEM232C9JQI7 657 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 ERLIN1O75477 346 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
SDC2-201ENST00000302190 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 FBXO38Q6PIJ6 1188 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 TRIM47Q96LD4 638 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 AK7Q96M32 723 aa15.97■□□□□ 0.15
SDC2-201ENST00000302190 COL14A1Q05707 1796 aaKnown RBP15.96■□□□□ 0.15
SDC2-201ENST00000302190 SCN11AQ9UI33 1791 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 CYP2D7A0A087X1C5 515 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 CTDNEP1O95476 244 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 CCDC175P0C221 793 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 VPS72Q15906 364 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 PIK3AP1Q6ZUJ8 805 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 FNBP4Q8N3X1 1017 aaPredicted RBP15.96■□□□□ 0.15
SDC2-201ENST00000302190 SPATA5Q8NB90 893 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 ST7Q9NRC1 585 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 SPTLC3Q9NUV7 552 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 KIF28PB7ZC32 967 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 CMA1P23946 247 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 EPS15P42566 896 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 GYG1P46976 350 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 ITPK1Q13572 414 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 CCDC178Q5BJE1 867 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 LRRC37A3O60309 1634 aa15.96■□□□□ 0.15
SDC2-201ENST00000302190 MAGEB6P1A0A0J9YX57 407 aa15.96■□□□□ 0.14
SDC2-201ENST00000302190 TRIM37O94972 964 aa15.96■□□□□ 0.14
SDC2-201ENST00000302190 SOGA3Q5TF21 947 aa15.96■□□□□ 0.14
SDC2-201ENST00000302190 TRMT1LQ7Z2T5 733 aaKnown RBP15.96■□□□□ 0.14
SDC2-201ENST00000302190 PLA2G4DQ86XP0 818 aa15.96■□□□□ 0.14
SDC2-201ENST00000302190 IFNL3Q8IZI9 196 aa15.96■□□□□ 0.14
SDC2-201ENST00000302190 RABEP2Q9H5N1 569 aa15.96■□□□□ 0.14
SDC2-201ENST00000302190 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.96■□□□□ 0.14
SDC2-201ENST00000302190 MCAMP43121 646 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 MTIF2P46199 727 aaKnown RBP15.95■□□□□ 0.14
SDC2-201ENST00000302190 ETF1P62495 437 aaKnown RBP15.95■□□□□ 0.14
SDC2-201ENST00000302190 HEATR3Q7Z4Q2 680 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 TEX13AQ9BXU3 409 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms