RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 FGAP02671 866 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 MORC3Q14149 939 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 TTC39AQ5SRH9 613 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
ZNF558-201ENST00000301475 CTAGE15A4D2H0 777 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 PRPF6O94906 941 aaKnown RBP12.39□□□□□ -0.43
ZNF558-201ENST00000301475 CTAGE8P0CG41 777 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 ATF3P18847 181 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 IMMTQ16891 758 aaKnown RBP12.39□□□□□ -0.43
ZNF558-201ENST00000301475 LMBR1LQ6UX01 489 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 LRP10Q7Z4F1 713 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 CTAGE6Q86UF2 777 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 IGSF22Q8N9C0 903 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 CPDO75976 1380 aa12.39□□□□□ -0.43
ZNF558-201ENST00000301475 MFAP3LO75121 409 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 CPP00450 1065 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 SARSP49591 514 aaKnown RBP12.38□□□□□ -0.43
ZNF558-201ENST00000301475 NT5DC1Q5TFE4 455 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 NCAPH2Q6IBW4 605 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 MLKLQ8NB16 471 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 NCAPGQ9BPX3 1015 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 RNF216Q9NWF9 866 aaPredicted RBP12.38□□□□□ -0.43
ZNF558-201ENST00000301475 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
ZNF558-201ENST00000301475 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
ZNF558-201ENST00000301475 PBX1P40424 430 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 CASP7P55210 303 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 E2F4Q16254 413 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 AMOTQ4VCS5 1084 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 SERTAD1Q9UHV2 236 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 ZMYM6O95789 1325 aa12.38□□□□□ -0.43
ZNF558-201ENST00000301475 A0A087WZG4 1122 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 AMPD2Q01433 879 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 TADA2BQ86TJ2 420 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 RIN2Q8WYP3 895 aaPredicted RBP12.37□□□□□ -0.43
ZNF558-201ENST00000301475 NAPGQ99747 312 aaPredicted RBP12.37□□□□□ -0.43
ZNF558-201ENST00000301475 GBP3Q9H0R5 595 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 SENP2Q9HC62 589 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 TMEM94Q12767 1356 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 ARFGEF2Q9Y6D5 1785 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 POLR2DO15514 142 aaKnown RBP12.37□□□□□ -0.43
ZNF558-201ENST00000301475 ARHGAP25P42331 645 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
ZNF558-201ENST00000301475 FXR1P51114 621 aaKnown RBP eCLIP12.37□□□□□ -0.43
ZNF558-201ENST00000301475 WHAMMP3Q1A5X7 153 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 SKIDA1Q1XH10 827 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 EFCAB13Q8IY85 973 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 KRI1Q8N9T8 703 aaKnown RBP12.37□□□□□ -0.43
ZNF558-201ENST00000301475 NCOA7Q8NI08 942 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 NAA15Q9BXJ9 866 aaKnown RBP12.37□□□□□ -0.43
ZNF558-201ENST00000301475 GYPCP04921 128 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 CASP14P31944 242 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 WDR93Q6P2C0 686 aa12.37□□□□□ -0.43
ZNF558-201ENST00000301475 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
ZNF558-201ENST00000301475 SPEF2Q9C093 1822 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 PLCD1P51178 756 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 ERVK-24P63145 666 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 TUBB2AQ13885 445 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 ZNF790Q6PG37 636 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 PPFIBP1Q86W92 1011 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 KAT2BQ92831 832 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 MYCBPQ99417 103 aaPredicted RBP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 TUBB2BQ9BVA1 445 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 ZNF142P52746 1687 aaPredicted RBP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 LRRC24Q50LG9 513 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 SUGP1Q8IWZ8 645 aaKnown RBP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 ELOA2Q8IYF1 753 aaPredicted RBP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 ADD3Q9UEY8 706 aaKnown RBP12.36□□□□□ -0.43
ZNF558-201ENST00000301475 DACH1Q9UI36 760 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 HPCAL4Q9UM19 191 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
ZNF558-201ENST00000301475 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 STX17P56962 302 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 PIP4K2BP78356 416 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 WASHC4Q2M389 1173 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 DNAJC21Q5F1R6 531 aaKnown RBP12.35□□□□□ -0.43
ZNF558-201ENST00000301475 MMS22LQ6ZRQ5 1243 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 MICU3Q86XE3 530 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 CABLES1Q8TDN4 633 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
ZNF558-201ENST00000301475 ACBD3Q9H3P7 528 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 FBXO2Q9UK22 296 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-201ENST00000301475 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 CD44P16070 742 aaKnown RBP12.35□□□□□ -0.43
ZNF558-201ENST00000301475 FECHP22830 423 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 TOB1P50616 345 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-201ENST00000301475 TUBB4BP68371 445 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 FOXO4P98177 505 aa12.35□□□□□ -0.43
ZNF558-201ENST00000301475 FKBP4Q02790 459 aaKnown RBP eCLIP12.35□□□□□ -0.43
ZNF558-201ENST00000301475 USP49Q70CQ1 688 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms