RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 SLC4A8Q2Y0W8 1093 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 HAUS1Q96CS2 278 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 PARD3Q8TEW0 1356 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 MARCKSP29966 332 aaPredicted RBP12.54□□□□□ -0.4
GCN1-201ENST00000300648 PDCD2Q16342 344 aaPredicted RBP12.54□□□□□ -0.4
GCN1-201ENST00000300648 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 BBOF1Q8ND07 529 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 PPP1R1BQ9UD71 204 aaPredicted RBP12.54□□□□□ -0.4
GCN1-201ENST00000300648 ASIC2Q16515 512 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 EIF3CLB5ME19 914 aaKnown RBP12.54□□□□□ -0.4
GCN1-201ENST00000300648 TBC1D8BQ0IIM8 1120 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 SDCCAG3Q96C92 435 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 EIF3CQ99613 913 aaKnown RBP12.54□□□□□ -0.4
GCN1-201ENST00000300648 ADAMTS12P58397 1594 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 ARID5AQ03989 594 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 MIS12Q9H081 205 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 PAK1Q13153 545 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 RNF113AO15541 343 aaKnown RBP12.53□□□□□ -0.4
GCN1-201ENST00000300648 ANKRD2Q9GZV1 360 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 KRT3P12035 628 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 MYO1AQ9UBC5 1043 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 PRAG1Q86YV5 1406 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 GCKP35557 465 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 TEKT1Q969V4 418 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 AMOTL2Q9Y2J4 779 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 SLC4A4Q9Y6R1 1079 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 PTPDC1A2A3K4 754 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 TTC36A6NLP5 189 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
GCN1-201ENST00000300648 NAA16Q6N069 864 aaPredicted RBP12.53□□□□□ -0.4
GCN1-201ENST00000300648 OGFOD1Q8N543 542 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 RAPGEF1Q13905 1077 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
GCN1-201ENST00000300648 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 CREB3L3Q68CJ9 461 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 MCTP2Q6DN12 878 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 IWS1Q96ST2 819 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 TRIM4Q9C037 500 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
GCN1-201ENST00000300648 RBSNQ9H1K0 784 aa12.52□□□□□ -0.4
GCN1-201ENST00000300648 RGS16O15492 202 aaPredicted RBP12.52□□□□□ -0.4
GCN1-201ENST00000300648 DBN1Q16643 649 aa12.52□□□□□ -0.4
GCN1-201ENST00000300648 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.4
GCN1-201ENST00000300648 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.4
GCN1-201ENST00000300648 EPS15L1Q9UBC2 864 aa12.52□□□□□ -0.4
GCN1-201ENST00000300648 ABCC1P33527 1531 aa12.52□□□□□ -0.4
GCN1-201ENST00000300648 OAS2P29728 719 aaKnown RBP12.52□□□□□ -0.41
GCN1-201ENST00000300648 PI4KAP2A4QPH2 592 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 PSDA5PKW4 1024 aaPredicted RBP12.52□□□□□ -0.41
GCN1-201ENST00000300648 TMEM110-MUSTN1A8MSY1 372 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 HAND2P61296 217 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 PI4KAP1Q8N8J0 262 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 KCNH3Q9ULD8 1083 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 SAR1BQ9Y6B6 198 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 LRRD1A4D1F6 860 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 SMIM23A6NLE4 172 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 AK2P54819 239 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 CCDC89Q8N998 374 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.41
GCN1-201ENST00000300648 TNFAIP3P21580 790 aa12.52□□□□□ -0.41
GCN1-201ENST00000300648 NUTM2BA6NNL0 878 aaPredicted RBP12.51□□□□□ -0.41
GCN1-201ENST00000300648 NUTM2EB1AL46 878 aaPredicted RBP12.51□□□□□ -0.41
GCN1-201ENST00000300648 F6X3S4 739 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 MCM7P33993 719 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 RPS6KA1Q15418 735 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 SNCBQ16143 134 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
GCN1-201ENST00000300648 ZNF500O60304 480 aaPredicted RBP12.51□□□□□ -0.41
GCN1-201ENST00000300648 KSR2Q6VAB6 950 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 TUBB6Q9BUF5 446 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 KDM2BQ8NHM5 1336 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 CCDC124Q96CT7 223 aaKnown RBP12.51□□□□□ -0.41
GCN1-201ENST00000300648 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 ASIC3Q9UHC3 531 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 WWC3Q9ULE0 1092 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 CCDC169A6NNP5 214 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
GCN1-201ENST00000300648 FNBP1Q96RU3 617 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 TRAF5O00463 557 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 PPP1R2P3Q6NXS1 205 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 TRIM42Q8IWZ5 723 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 TRIML1Q8N9V2 468 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 KIF24Q5T7B8 1368 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 SYCP2Q9BX26 1530 aa12.51□□□□□ -0.41
GCN1-201ENST00000300648 PFDN6O15212 129 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 NLRP12P59046 1061 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 IFIH1Q9BYX4 1025 aaKnown RBP12.5□□□□□ -0.41
GCN1-201ENST00000300648 NT5C2P49902 561 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 APOBRQ0VD83 1088 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 ELF2Q15723 593 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 KRT71Q3SY84 523 aa12.5□□□□□ -0.41
GCN1-201ENST00000300648 MICAL1Q8TDZ2 1067 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms