RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 SLF2Q8IX21 1173 aa12.73□□□□□ -0.37
VWA3A-201ENST00000299840 ZNF70Q9UC06 446 aaPredicted RBP12.73□□□□□ -0.37
VWA3A-201ENST00000299840 ADM5C9JUS6 153 aa12.73□□□□□ -0.37
VWA3A-201ENST00000299840 U2AF2P26368 475 aaKnown RBP eCLIP12.73□□□□□ -0.37
VWA3A-201ENST00000299840 MCM5P33992 734 aa12.73□□□□□ -0.37
VWA3A-201ENST00000299840 CST9Q5W186 159 aa12.73□□□□□ -0.37
VWA3A-201ENST00000299840 PI16Q6UXB8 463 aa12.73□□□□□ -0.37
VWA3A-201ENST00000299840 PRIMPOLQ96LW4 560 aa12.73□□□□□ -0.37
VWA3A-201ENST00000299840 NOL10Q9BSC4 688 aaKnown RBP12.73□□□□□ -0.37
VWA3A-201ENST00000299840 RWDD1Q9H446 243 aaPredicted RBP12.73□□□□□ -0.37
VWA3A-201ENST00000299840 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
VWA3A-201ENST00000299840 PAPPA2Q9BXP8 1791 aa12.73□□□□□ -0.37
VWA3A-201ENST00000299840 AOX1Q06278 1338 aa12.73□□□□□ -0.37
VWA3A-201ENST00000299840 CYP2E1P05181 493 aaPredicted RBP12.72□□□□□ -0.37
VWA3A-201ENST00000299840 HMGN5P82970 282 aaKnown RBP12.72□□□□□ -0.37
VWA3A-201ENST00000299840 FMR1Q06787 632 aaKnown RBP eCLIP12.72□□□□□ -0.37
VWA3A-201ENST00000299840 TERF2Q15554 542 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 CDCA5Q96FF9 252 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 CXorf56Q9H5V9 222 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 TOMM22Q9NS69 142 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 ABCF2Q9UG63 623 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 DAGLAQ9Y4D2 1042 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 FOCADQ5VW36 1801 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 ATP5JP18859 108 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 ZAP70P43403 619 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 GSTO1P78417 241 aa12.72□□□□□ -0.37
VWA3A-201ENST00000299840 TDRD3Q9H7E2 651 aaKnown RBP12.72□□□□□ -0.37
VWA3A-201ENST00000299840 KLHL33A6NCF5 533 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 SMARCA5O60264 1052 aaPredicted RBP12.71□□□□□ -0.37
VWA3A-201ENST00000299840 MAP4K4O95819 1239 aaPredicted RBP12.71□□□□□ -0.37
VWA3A-201ENST00000299840 LDHCP07864 332 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 DNAJC5GQ8N7S2 189 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 NSUN4Q96CB9 384 aaKnown RBP12.71□□□□□ -0.37
VWA3A-201ENST00000299840 FAM210AQ96ND0 272 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 SNRKQ9NRH2 765 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 CELF2O95319 508 aaKnown RBP12.71□□□□□ -0.37
VWA3A-201ENST00000299840 MECOMQ03112 1051 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 TNFAIP1Q13829 316 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
VWA3A-201ENST00000299840 SMC5Q8IY18 1101 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 ZNF384Q8TF68 577 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 PAIP2Q9BPZ3 127 aaKnown RBP12.71□□□□□ -0.37
VWA3A-201ENST00000299840 NBPF3Q9H094 633 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 TLL2Q9Y6L7 1015 aa12.71□□□□□ -0.37
VWA3A-201ENST00000299840 MROH7-TTC4A0A0A0MT08 1334 aa12.71□□□□□ -0.38
VWA3A-201ENST00000299840 FKBP1BP68106 108 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 FAM177A1Q8N128 213 aaPredicted RBP12.7□□□□□ -0.38
VWA3A-201ENST00000299840 PIK3R5Q8WYR1 880 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 HHIPL1Q96JK4 782 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 GPR75-ASB3A0A0A6YYF3 556 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 CLRN2A0PK11 232 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 RASSF10A6NK89 507 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 RAD51AP2Q09MP3 1159 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
VWA3A-201ENST00000299840 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 GAS2L3Q86XJ1 694 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 TSC1Q92574 1164 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 TNPO1Q92973 898 aaKnown RBP12.7□□□□□ -0.38
VWA3A-201ENST00000299840 DEFB129Q9H1M3 183 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 PIH1D3Q9NQM4 214 aaKnown RBP12.7□□□□□ -0.38
VWA3A-201ENST00000299840 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
VWA3A-201ENST00000299840 LRP2BPQ9P2M1 347 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
VWA3A-201ENST00000299840 TNNI2P48788 182 aa12.69□□□□□ -0.38
VWA3A-201ENST00000299840 NASPP49321 788 aaPredicted RBP12.69□□□□□ -0.38
VWA3A-201ENST00000299840 FOXD4L6Q3SYB3 417 aaPredicted RBP12.69□□□□□ -0.38
VWA3A-201ENST00000299840 CDC42EP5Q6NZY7 148 aa12.69□□□□□ -0.38
VWA3A-201ENST00000299840 DLK2Q6UY11 383 aa12.69□□□□□ -0.38
VWA3A-201ENST00000299840 FOXD4L3Q6VB84 417 aaPredicted RBP12.69□□□□□ -0.38
VWA3A-201ENST00000299840 ZKSCAN5Q9Y2L8 839 aa12.69□□□□□ -0.38
VWA3A-201ENST00000299840 RPAP1Q9BWH6 1393 aaPredicted RBP12.69□□□□□ -0.38
VWA3A-201ENST00000299840 HAUS7Q99871 368 aa12.69□□□□□ -0.38
VWA3A-201ENST00000299840 GBA2Q9HCG7 927 aaPredicted RBP12.69□□□□□ -0.38
VWA3A-201ENST00000299840 ECHDC1Q9NTX5 307 aa12.69□□□□□ -0.38
VWA3A-201ENST00000299840 TMOD2Q9NZR1 351 aa12.69□□□□□ -0.38
VWA3A-201ENST00000299840 CNTNAP1P78357 1384 aa12.69□□□□□ -0.38
VWA3A-201ENST00000299840 RAD50Q92878 1312 aa12.69□□□□□ -0.38
VWA3A-201ENST00000299840 ERICH4A6NGS2 130 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 IGHDP01880 384 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 JMYQ8N9B5 988 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 VEZTQ9HBM0 779 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 RFX7Q2KHR2 1363 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 THSD7BQ9C0I4 1608 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 TTC41PQ6P2S7 1318 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 SALL3Q9BXA9 1300 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
VWA3A-201ENST00000299840 PPP4CP60510 307 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 RASA3Q14644 834 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 C2orf69Q8N8R5 385 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 GPATCH3Q96I76 525 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 IDI2Q9BXS1 227 aa12.68□□□□□ -0.38
VWA3A-201ENST00000299840 NF2P35240 595 aa12.67□□□□□ -0.38
VWA3A-201ENST00000299840 HTRA3P83110 453 aa12.67□□□□□ -0.38
VWA3A-201ENST00000299840 SUPT20HL1Q3ZLR7 823 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms