RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 AP5Z1O43299 807 aa16.72■□□□□ 0.27
CDH23-202ENST00000299366 LDHCP07864 332 aa16.72■□□□□ 0.27
CDH23-202ENST00000299366 MAPKAPK5Q8IW41 473 aa16.72■□□□□ 0.27
CDH23-202ENST00000299366 MAP3K4Q9Y6R4 1608 aa16.72■□□□□ 0.27
CDH23-202ENST00000299366 PDE8AO60658 829 aa16.72■□□□□ 0.27
CDH23-202ENST00000299366 AMPD3Q01432 767 aa16.72■□□□□ 0.27
CDH23-202ENST00000299366 WDR78Q5VTH9 848 aa16.72■□□□□ 0.27
CDH23-202ENST00000299366 RGS22Q8NE09 1264 aa16.72■□□□□ 0.27
CDH23-202ENST00000299366 DEXIO95424 95 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 CYLC1P35663 651 aaPredicted RBP16.71■□□□□ 0.27
CDH23-202ENST00000299366 DSCC1Q9BVC3 393 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 ZBTB1Q9Y2K1 713 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.71■□□□□ 0.27
CDH23-202ENST00000299366 USP6P35125 1406 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 ADCY9O60503 1353 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 GSTTP1A0A1W2PQM5 241 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 SHTN1A0MZ66 631 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 CASP1P29466 404 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 RASGRP4Q8TDF6 673 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
CDH23-202ENST00000299366 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 ALS2CR12Q96Q35 445 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 ZBTB21Q9ULJ3 1066 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 KIF24Q5T7B8 1368 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 AATKQ6ZMQ8 1374 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 TTC38Q5R3I4 469 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 ZNF654Q8IZM8 581 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
CDH23-202ENST00000299366 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
CDH23-202ENST00000299366 SP4Q02446 784 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 PDE4DQ08499 809 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 IFNL3Q8IZI9 196 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 ATRIPQ8WXE1 791 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 CTAGE1Q96RT6 745 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 UTP14CQ5TAP6 766 aaKnown RBP16.7■□□□□ 0.26
CDH23-202ENST00000299366 LPIN2Q92539 896 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 PPP1R12BO60237 982 aaPredicted RBP16.7■□□□□ 0.26
CDH23-202ENST00000299366 ANKRD13CQ8N6S4 541 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 MYO6Q9UM54 1294 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 SYNRGQ9UMZ2 1314 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 USP27XA6NNY8 438 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 ST7Q9NRC1 585 aa16.7■□□□□ 0.26
CDH23-202ENST00000299366 TLDC2A0PJX2 215 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 SPAG1Q07617 926 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.69■□□□□ 0.26
CDH23-202ENST00000299366 FAM207AQ9NSI2 230 aaPredicted RBP16.69■□□□□ 0.26
CDH23-202ENST00000299366 RMND1Q9NWS8 449 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 TRAF5O00463 557 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 TFAP4Q01664 338 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 TOB2Q14106 344 aaPredicted RBP16.69■□□□□ 0.26
CDH23-202ENST00000299366 TPTE2Q6XPS3 522 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 FCHSD1Q86WN1 690 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 CSGALNACT2Q8N6G5 542 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 CUTAO60888 179 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 POLA2Q14181 598 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 DCAF17Q5H9S7 520 aaPredicted RBP16.69■□□□□ 0.26
CDH23-202ENST00000299366 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 NLRC4Q9NPP4 1024 aa16.69■□□□□ 0.26
CDH23-202ENST00000299366 TNKSO95271 1327 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 CCNT1O60563 726 aaKnown RBP16.68■□□□□ 0.26
CDH23-202ENST00000299366 RAPGEF1Q13905 1077 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 ZYXQ15942 572 aaKnown RBP16.68■□□□□ 0.26
CDH23-202ENST00000299366 NELFCDQ8IXH7 590 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 TMEM110-MUSTN1A8MSY1 372 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 KRT86O43790 486 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 SEC31AO94979 1220 aaKnown RBP16.68■□□□□ 0.26
CDH23-202ENST00000299366 MAEAQ7L5Y9 396 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 VPS36Q86VN1 386 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 FNBP4Q8N3X1 1017 aaPredicted RBP16.68■□□□□ 0.26
CDH23-202ENST00000299366 HGSO14964 777 aaPredicted RBP16.68■□□□□ 0.26
CDH23-202ENST00000299366 GJC1P36383 396 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 NOSTRINQ8IVI9 506 aa16.68■□□□□ 0.26
CDH23-202ENST00000299366 ZNF274Q96GC6 653 aaPredicted RBP16.68■□□□□ 0.26
CDH23-202ENST00000299366 NOC4LQ9BVI4 516 aaKnown RBP16.68■□□□□ 0.26
CDH23-202ENST00000299366 SSH2Q76I76 1423 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 HIBADHP31937 336 aaKnown RBP16.67■□□□□ 0.26
CDH23-202ENST00000299366 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 ZCCHC11Q5TAX3 1644 aaKnown RBP16.67■□□□□ 0.26
CDH23-202ENST00000299366 GNAT2P19087 354 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 TCP10Q12799 353 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 SEPT7Q16181 437 aaKnown RBP16.67■□□□□ 0.26
CDH23-202ENST00000299366 FAM98CQ17RN3 349 aaKnown RBP16.67■□□□□ 0.26
CDH23-202ENST00000299366 KRT79Q5XKE5 535 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 WWC2Q6AWC2 1192 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 TEX11Q8IYF3 940 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 TGFBRAP1Q8WUH2 860 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 CTSWP56202 376 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 SPTLC3Q9NUV7 552 aa16.67■□□□□ 0.26
CDH23-202ENST00000299366 CEP152O94986 1710 aa16.66■□□□□ 0.26
CDH23-202ENST00000299366 FGFR1OPO95684 399 aaKnown RBP16.66■□□□□ 0.26
CDH23-202ENST00000299366 ZMYM1Q5SVZ6 1142 aa16.66■□□□□ 0.26
CDH23-202ENST00000299366 A0A0G2JLW4 131 aa16.66■□□□□ 0.26
CDH23-202ENST00000299366 CYP27B1O15528 508 aa16.66■□□□□ 0.26
CDH23-202ENST00000299366 CHMP2AO43633 222 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms