RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 PI4K2BQ8TCG2 481 aa7.95□□□□□ -1.14
DEPDC4-201ENST00000299185 LPIN2Q92539 896 aa7.95□□□□□ -1.14
DEPDC4-201ENST00000299185 HLA-CQ95604 372 aa7.95□□□□□ -1.14
DEPDC4-201ENST00000299185 FAM84BQ96KN1 310 aaPredicted RBP7.95□□□□□ -1.14
DEPDC4-201ENST00000299185 DNAJC2Q99543 621 aaKnown RBP7.95□□□□□ -1.14
DEPDC4-201ENST00000299185 BOLA2Q9H3K6 86 aa7.95□□□□□ -1.14
DEPDC4-201ENST00000299185 PIH1D3Q9NQM4 214 aaKnown RBP7.95□□□□□ -1.14
DEPDC4-201ENST00000299185 MYH13Q9UKX3 1938 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 TULP1O00294 542 aaPredicted RBP7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 RAD17O75943 681 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 ZAP70P43403 619 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 PDE1AP54750 535 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 KIAA2012Q0VF49 1180 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 UBE4AQ14139 1066 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 GORABQ5T7V8 394 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 TBC1D9Q6ZT07 1266 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 FBXO33Q7Z6M2 555 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 RTFDC1Q9BY42 306 aaPredicted RBP7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 RNF181Q9P0P0 153 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 LEMD3Q9Y2U8 911 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 CCDC88AQ3V6T2 1871 aa7.94□□□□□ -1.14
DEPDC4-201ENST00000299185 MAST2Q6P0Q8 1798 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 JUNDP17535 347 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 KCNMA1Q12791 1236 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 C9orf131Q5VYM1 1079 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 NIM1KQ8IY84 436 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 RTKN2Q8IZC4 609 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 CERS5Q8N5B7 392 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 PSMD1Q99460 953 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 CD209Q9NNX6 404 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 GPR108Q9NPR9 543 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 HMG20BQ9P0W2 317 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 AKAP2Q9Y2D5 859 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 PCDHAC2Q9Y5I4 1007 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 AOX1Q06278 1338 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 MYO5AQ9Y4I1 1855 aaKnown RBP7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 AKAP11Q9UKA4 1901 aa7.93□□□□□ -1.14
DEPDC4-201ENST00000299185 SBF1O95248 1867 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 F8W031 263 aaPredicted RBP7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 GOLIM4O00461 696 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 VSIG8P0DPA2 414 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 ARID4AP29374 1257 aaPredicted RBP7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 HIBADHP31937 336 aaKnown RBP7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 GTF2IP78347 998 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 TTC22Q5TAA0 569 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 SOGA3Q5TF21 947 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 CC2D2BQ6DHV5 1058 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 ZNF804AQ7Z570 1209 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 VPS37DQ86XT2 251 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 EYA3Q99504 573 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 TMX4Q9H1E5 349 aaPredicted RBP7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 ECHDC1Q9NTX5 307 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 LTBP3Q9NS15 1303 aa7.92□□□□□ -1.14
DEPDC4-201ENST00000299185 PSMD14O00487 310 aa7.91□□□□□ -1.14
DEPDC4-201ENST00000299185 PRDX5P30044 214 aa7.91□□□□□ -1.14
DEPDC4-201ENST00000299185 PTCRAQ6ISU1 281 aaPredicted RBP7.91□□□□□ -1.14
DEPDC4-201ENST00000299185 C15orf52Q6ZUT6 534 aaKnown RBP7.91□□□□□ -1.14
DEPDC4-201ENST00000299185 TDRD7Q8NHU6 1098 aaKnown RBP7.91□□□□□ -1.14
DEPDC4-201ENST00000299185 ZC3H12CQ9C0D7 883 aaKnown RBP7.91□□□□□ -1.14
DEPDC4-201ENST00000299185 GPBP1L1Q9HC44 474 aaPredicted RBP7.91□□□□□ -1.14
DEPDC4-201ENST00000299185 PSME4Q14997 1843 aa7.91□□□□□ -1.14
DEPDC4-201ENST00000299185 DOCK2Q92608 1830 aa7.91□□□□□ -1.14
DEPDC4-201ENST00000299185 FRAT2O75474 233 aaPredicted RBP7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 CYP2E1P05181 493 aaPredicted RBP7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 ATP5JP18859 108 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 LMNB1P20700 586 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 SCNN1DP51172 638 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 CXCL9Q07325 125 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 DIXDC1Q155Q3 683 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 CAVIN4Q5BKX8 364 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 CCDC158Q5M9N0 1113 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 DNAJC5GQ8N7S2 189 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 SPATA5Q8NB90 893 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 SUPT20HQ8NEM7 779 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 ZNF384Q8TF68 577 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 SYMPKQ92797 1274 aaKnown RBP7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 HAUS7Q99871 368 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 NUDT12Q9BQG2 462 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 COA1Q9GZY4 146 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 IL25Q9H293 177 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 STAP2Q9UGK3 403 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 GJA3Q9Y6H8 435 aa7.9□□□□□ -1.14
DEPDC4-201ENST00000299185 ASTN2O75129 1339 aaPredicted RBP7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 TTC41PQ6P2S7 1318 aa7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 IDH1O75874 414 aaKnown RBP7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 GLRX3O76003 335 aaKnown RBP7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 UQCRFS1P1P0C7P4 283 aa7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 IL1R1P14778 569 aa7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 SDSP20132 328 aa7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 GMPSP49915 693 aaPredicted RBP7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 MFSD14BQ5SR56 506 aa7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 DACT2Q5SW24 774 aa7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 CCDC129Q6ZRS4 1044 aa7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 ADGRA1Q86SQ6 560 aa7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 KIAA0825Q8IV33 1275 aa7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 ZNF526Q8TF50 670 aaPredicted RBP7.89□□□□□ -1.15
DEPDC4-201ENST00000299185 RILPL2Q969X0 211 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms