RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SMCR8Q8TEV9 937 aaPredicted RBP25.58■■□□□ 1.69
SMCO4-201ENST00000298966 KIF1BPQ96EK5 621 aa25.58■■□□□ 1.69
SMCO4-201ENST00000298966 COPRSQ9NQ92 184 aa25.58■■□□□ 1.69
SMCO4-201ENST00000298966 EYA2O00167 538 aa25.57■■□□□ 1.68
SMCO4-201ENST00000298966 PTPRAP18433 802 aa25.57■■□□□ 1.68
SMCO4-201ENST00000298966 RGS3P49796 1198 aa25.57■■□□□ 1.68
SMCO4-201ENST00000298966 LRCH3Q96II8 777 aa25.57■■□□□ 1.68
SMCO4-201ENST00000298966 LNPKQ9C0E8 428 aa25.57■■□□□ 1.68
SMCO4-201ENST00000298966 FBXO3Q9UK99 471 aa25.57■■□□□ 1.68
SMCO4-201ENST00000298966 TAOK2Q9UL54 1235 aa25.57■■□□□ 1.68
SMCO4-201ENST00000298966 DOCK3Q8IZD9 2030 aa25.57■■□□□ 1.68
SMCO4-201ENST00000298966 PTPRFP10586 1907 aa25.57■■□□□ 1.68
SMCO4-201ENST00000298966 PHF20L1A8MW92 1017 aa25.56■■□□□ 1.68
SMCO4-201ENST00000298966 ZFPM1Q8IX07 1006 aa25.56■■□□□ 1.68
SMCO4-201ENST00000298966 PAK6Q9NQU5 681 aaPredicted RBP25.56■■□□□ 1.68
SMCO4-201ENST00000298966 GNL3LQ9NVN8 582 aaKnown RBP25.56■■□□□ 1.68
SMCO4-201ENST00000298966 EXOC6BQ9Y2D4 811 aa25.56■■□□□ 1.68
SMCO4-201ENST00000298966 AFG3L2Q9Y4W6 797 aa25.56■■□□□ 1.68
SMCO4-201ENST00000298966 ALPK3Q96L96 1907 aa25.55■■□□□ 1.68
SMCO4-201ENST00000298966 NECAB2Q7Z6G3 386 aa25.55■■□□□ 1.68
SMCO4-201ENST00000298966 ZSCAN29Q8IWY8 852 aaPredicted RBP25.55■■□□□ 1.68
SMCO4-201ENST00000298966 COA7Q96BR5 231 aa25.55■■□□□ 1.68
SMCO4-201ENST00000298966 PAWRQ96IZ0 340 aaKnown RBP25.55■■□□□ 1.68
SMCO4-201ENST00000298966 ATRNL1Q5VV63 1379 aa25.55■■□□□ 1.68
SMCO4-201ENST00000298966 ENTPD3O75355 529 aa25.54■■□□□ 1.68
SMCO4-201ENST00000298966 G3BP1Q13283 466 aaKnown RBP eCLIP25.54■■□□□ 1.68
SMCO4-201ENST00000298966 CRISPLD2Q9H0B8 497 aa25.54■■□□□ 1.68
SMCO4-201ENST00000298966 MYH2Q9UKX2 1941 aa25.54■■□□□ 1.68
SMCO4-201ENST00000298966 DOCK1Q14185 1865 aa25.53■■□□□ 1.68
SMCO4-201ENST00000298966 OS9Q13438 667 aaPredicted RBP25.53■■□□□ 1.68
SMCO4-201ENST00000298966 IDI2Q9BXS1 227 aa25.53■■□□□ 1.68
SMCO4-201ENST00000298966 PDE4AP27815 886 aa25.52■■□□□ 1.68
SMCO4-201ENST00000298966 RFX5P48382 616 aaPredicted RBP25.52■■□□□ 1.68
SMCO4-201ENST00000298966 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.52■■□□□ 1.68
SMCO4-201ENST00000298966 SALL1Q9NSC2 1324 aa25.52■■□□□ 1.68
SMCO4-201ENST00000298966 TRIM75PA6NK02 468 aa25.51■■□□□ 1.67
SMCO4-201ENST00000298966 CTNND1O60716 968 aaKnown RBP25.51■■□□□ 1.67
SMCO4-201ENST00000298966 ATP2B3Q16720 1220 aa25.51■■□□□ 1.67
SMCO4-201ENST00000298966 ANKRD13CQ8N6S4 541 aa25.51■■□□□ 1.67
SMCO4-201ENST00000298966 RHPN1Q8TCX5 695 aa25.51■■□□□ 1.67
SMCO4-201ENST00000298966 PNMA3Q9UL41 463 aa25.51■■□□□ 1.67
SMCO4-201ENST00000298966 DENND2AQ9ULE3 1009 aa25.51■■□□□ 1.67
SMCO4-201ENST00000298966 AGTPBP1Q9UPW5 1226 aa25.51■■□□□ 1.67
SMCO4-201ENST00000298966 PHIPQ8WWQ0 1821 aa25.51■■□□□ 1.67
SMCO4-201ENST00000298966 SEMA3EO15041 775 aa25.5■■□□□ 1.67
SMCO4-201ENST00000298966 BMP8BP34820 402 aa25.5■■□□□ 1.67
SMCO4-201ENST00000298966 ANKLE1Q8NAG6 615 aa25.5■■□□□ 1.67
SMCO4-201ENST00000298966 GDF15Q99988 308 aa25.5■■□□□ 1.67
SMCO4-201ENST00000298966 COL6A3P12111 3177 aa25.5■■□□□ 1.67
SMCO4-201ENST00000298966 MNX1P50219 401 aaPredicted RBP25.49■■□□□ 1.67
SMCO4-201ENST00000298966 MAP3K10Q02779 954 aa25.49■■□□□ 1.67
SMCO4-201ENST00000298966 GPR153Q6NV75 609 aa25.49■■□□□ 1.67
SMCO4-201ENST00000298966 SH3BP5LQ7L8J4 393 aa25.49■■□□□ 1.67
SMCO4-201ENST00000298966 ATG9AQ7Z3C6 839 aa25.49■■□□□ 1.67
SMCO4-201ENST00000298966 C7orf61Q8IZ16 206 aa25.49■■□□□ 1.67
SMCO4-201ENST00000298966 ZGPATQ8N5A5 531 aaKnown RBP25.49■■□□□ 1.67
SMCO4-201ENST00000298966 DIS3LQ8TF46 1054 aaKnown RBP25.49■■□□□ 1.67
SMCO4-201ENST00000298966 A0A0C4DFX4 3053 aa25.48■■□□□ 1.67
SMCO4-201ENST00000298966 CIAO1O76071 339 aa25.48■■□□□ 1.67
SMCO4-201ENST00000298966 FAM110CQ1W6H9 321 aa25.48■■□□□ 1.67
SMCO4-201ENST00000298966 CEP126Q9P2H0 1117 aa25.48■■□□□ 1.67
SMCO4-201ENST00000298966 GAKO14976 1311 aa25.47■■□□□ 1.67
SMCO4-201ENST00000298966 SLF2Q8IX21 1173 aa25.47■■□□□ 1.67
SMCO4-201ENST00000298966 CLASRPQ8N2M8 674 aaKnown RBP25.47■■□□□ 1.67
SMCO4-201ENST00000298966 OSBPL3Q9H4L5 887 aa25.47■■□□□ 1.67
SMCO4-201ENST00000298966 ZMYND8Q9ULU4 1186 aaPredicted RBP25.47■■□□□ 1.67
SMCO4-201ENST00000298966 RFX7Q2KHR2 1363 aa25.46■■□□□ 1.67
SMCO4-201ENST00000298966 DDTLA6NHG4 134 aaPredicted RBP25.46■■□□□ 1.67
SMCO4-201ENST00000298966 HMGCRP04035 888 aa25.46■■□□□ 1.67
SMCO4-201ENST00000298966 PHKA1P46020 1223 aa25.46■■□□□ 1.67
SMCO4-201ENST00000298966 DZIP1Q86YF9 867 aaKnown RBP25.46■■□□□ 1.67
SMCO4-201ENST00000298966 BACH2Q9BYV9 841 aa25.46■■□□□ 1.67
SMCO4-201ENST00000298966 SIL1Q9H173 461 aa25.46■■□□□ 1.67
SMCO4-201ENST00000298966 LAMA3Q16787 3333 aa25.46■■□□□ 1.67
SMCO4-201ENST00000298966 IL15P40933 162 aaPredicted RBP25.45■■□□□ 1.66
SMCO4-201ENST00000298966 PICALMQ13492 652 aa25.45■■□□□ 1.66
SMCO4-201ENST00000298966 BMP2KLQ5H9B9 411 aa25.45■■□□□ 1.66
SMCO4-201ENST00000298966 CCDC84Q86UT8 332 aaPredicted RBP25.45■■□□□ 1.66
SMCO4-201ENST00000298966 PLEKHM2Q8IWE5 1019 aa25.45■■□□□ 1.66
SMCO4-201ENST00000298966 DEFB123Q8N688 67 aa25.45■■□□□ 1.66
SMCO4-201ENST00000298966 NBPF3Q9H094 633 aa25.45■■□□□ 1.66
SMCO4-201ENST00000298966 HMX1Q9NP08 348 aaPredicted RBP25.45■■□□□ 1.66
SMCO4-201ENST00000298966 PA2G4Q9UQ80 394 aaKnown RBP25.45■■□□□ 1.66
SMCO4-201ENST00000298966 APBB1O00213 710 aa25.44■■□□□ 1.66
SMCO4-201ENST00000298966 SLURP2P0DP57 97 aa25.44■■□□□ 1.66
SMCO4-201ENST00000298966 GCLCP48506 637 aaPredicted RBP25.44■■□□□ 1.66
SMCO4-201ENST00000298966 TREML2Q5T2D2 321 aa25.44■■□□□ 1.66
SMCO4-201ENST00000298966 PROCA1Q8NCQ7 364 aaPredicted RBP25.44■■□□□ 1.66
SMCO4-201ENST00000298966 RPTORQ8N122 1335 aa25.43■■□□□ 1.66
SMCO4-201ENST00000298966 SMARCA5O60264 1052 aaPredicted RBP25.43■■□□□ 1.66
SMCO4-201ENST00000298966 PABPC4Q13310 644 aaKnown RBP eCLIP25.43■■□□□ 1.66
SMCO4-201ENST00000298966 DDX4Q9NQI0 724 aaKnown RBP25.43■■□□□ 1.66
SMCO4-201ENST00000298966 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.43■■□□□ 1.66
SMCO4-201ENST00000298966 SALL3Q9BXA9 1300 aa25.42■■□□□ 1.66
SMCO4-201ENST00000298966 BTDP43251 543 aa25.42■■□□□ 1.66
SMCO4-201ENST00000298966 FAM163AQ96GL9 167 aaPredicted RBP25.42■■□□□ 1.66
SMCO4-201ENST00000298966 C11orf49Q9H6J7 331 aa25.42■■□□□ 1.66
SMCO4-201ENST00000298966 GPR108Q9NPR9 543 aa25.42■■□□□ 1.66
SMCO4-201ENST00000298966 ABCF2Q9UG63 623 aa25.42■■□□□ 1.66
SMCO4-201ENST00000298966 DDX60LQ5H9U9 1706 aaKnown RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms