RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 SYKP43405 635 aa15.61■□□□□ 0.09
TTC39B-201ENST00000297615 MXD3Q9BW11 206 aa15.61■□□□□ 0.09
TTC39B-201ENST00000297615 STX8Q9UNK0 236 aa15.61■□□□□ 0.09
TTC39B-201ENST00000297615 MAPK8IP1Q9UQF2 711 aa15.61■□□□□ 0.09
TTC39B-201ENST00000297615 LONRF3Q496Y0 759 aa15.6■□□□□ 0.09
TTC39B-201ENST00000297615 MSL1Q68DK7 614 aa15.6■□□□□ 0.09
TTC39B-201ENST00000297615 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
TTC39B-201ENST00000297615 DZIP1Q86YF9 867 aaKnown RBP15.6■□□□□ 0.09
TTC39B-201ENST00000297615 MAPKAPK5Q8IW41 473 aa15.6■□□□□ 0.09
TTC39B-201ENST00000297615 DHX40Q8IX18 779 aaKnown RBP15.6■□□□□ 0.09
TTC39B-201ENST00000297615 SMYD4Q8IYR2 804 aaPredicted RBP15.6■□□□□ 0.09
TTC39B-201ENST00000297615 ZNF654Q8IZM8 581 aa15.6■□□□□ 0.09
TTC39B-201ENST00000297615 GPKOWQ92917 476 aaPredicted RBP eCLIP15.6■□□□□ 0.09
TTC39B-201ENST00000297615 STRCQ7RTU9 1775 aa15.6■□□□□ 0.09
TTC39B-201ENST00000297615 AGXT2Q9BYV1 514 aa15.6■□□□□ 0.09
TTC39B-201ENST00000297615 TPM3P06753 285 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 HIBADHP31937 336 aaKnown RBP15.59■□□□□ 0.09
TTC39B-201ENST00000297615 HOMER1Q86YM7 354 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 PDCL2Q8N4E4 241 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 GNL3LQ9NVN8 582 aaKnown RBP15.59■□□□□ 0.09
TTC39B-201ENST00000297615 SLIT2O94813 1529 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 USP17L3A6NCW0 530 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 USP17L4A6NCW7 530 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 TSPY2A6NKD2 308 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 POLR2DO15514 142 aaKnown RBP15.59■□□□□ 0.09
TTC39B-201ENST00000297615 TRIM37O94972 964 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 SART3Q15020 963 aaKnown RBP15.59■□□□□ 0.09
TTC39B-201ENST00000297615 IFIT1BQ5T764 474 aaKnown RBP15.59■□□□□ 0.09
TTC39B-201ENST00000297615 USP17L1Q7RTZ2 530 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 CLEC10AQ8IUN9 316 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 LRRC8AQ8IWT6 810 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 ENGASEQ8NFI3 743 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 XPO4Q9C0E2 1151 aaKnown RBP15.59■□□□□ 0.09
TTC39B-201ENST00000297615 SALL1Q9NSC2 1324 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 C6orf229H3BNL8 230 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 USP5P45974 858 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 DHX8Q14562 1220 aaKnown RBP15.59■□□□□ 0.09
TTC39B-201ENST00000297615 PARP10Q53GL7 1025 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 SHC4Q6S5L8 630 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 FMR1NBQ8N0W7 255 aaPredicted RBP15.59■□□□□ 0.09
TTC39B-201ENST00000297615 TGFBRAP1Q8WUH2 860 aa15.59■□□□□ 0.09
TTC39B-201ENST00000297615 ZMYM6O95789 1325 aa15.58■□□□□ 0.09
TTC39B-201ENST00000297615 COL4A1P02462 1669 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 ATP2B2Q01814 1243 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 PICALMQ13492 652 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 TRIM22Q8IYM9 498 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 FANCBQ8NB91 859 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 CCDC112Q8NEF3 446 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 TOGARAM1Q9Y4F4 1720 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.58■□□□□ 0.08
TTC39B-201ENST00000297615 TULP1O00294 542 aaPredicted RBP15.58■□□□□ 0.08
TTC39B-201ENST00000297615 ADALQ6DHV7 355 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 RBM43Q6ZSC3 357 aaKnown RBP15.58■□□□□ 0.08
TTC39B-201ENST00000297615 NBPF11Q86T75 865 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 CNNM3Q8NE01 707 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 DHX58Q96C10 678 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 EPSTI1Q96J88 318 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 AK7Q96M32 723 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 NAT10Q9H0A0 1025 aaKnown RBP15.58■□□□□ 0.08
TTC39B-201ENST00000297615 KIAA1468Q9P260 1216 aa15.58■□□□□ 0.08
TTC39B-201ENST00000297615 ERCC3P19447 782 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 TPTE2Q6XPS3 522 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 ENAHQ8N8S7 591 aaPredicted RBP15.57■□□□□ 0.08
TTC39B-201ENST00000297615 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.57■□□□□ 0.08
TTC39B-201ENST00000297615 CTAGE5O15320 804 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 SAFBQ15424 915 aaKnown RBP eCLIP15.57■□□□□ 0.08
TTC39B-201ENST00000297615 NTRK3Q16288 839 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 CEP135Q66GS9 1140 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.57■□□□□ 0.08
TTC39B-201ENST00000297615 CPLX3Q8WVH0 158 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 LRRC4BQ9NT99 713 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 RTEL1Q9NZ71 1219 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 GLI3P10071 1580 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 PRR29P0C7W0 189 aa15.57■□□□□ 0.08
TTC39B-201ENST00000297615 SERPINC1P01008 464 aa15.56■□□□□ 0.08
TTC39B-201ENST00000297615 PTPN14Q15678 1187 aa15.56■□□□□ 0.08
TTC39B-201ENST00000297615 FOXP4Q8IVH2 680 aaPredicted RBP15.56■□□□□ 0.08
TTC39B-201ENST00000297615 KCNG4Q8TDN1 519 aa15.56■□□□□ 0.08
TTC39B-201ENST00000297615 DPF2Q92785 391 aa15.56■□□□□ 0.08
TTC39B-201ENST00000297615 SERTAD1Q9UHV2 236 aa15.56■□□□□ 0.08
TTC39B-201ENST00000297615 MCM7P33993 719 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 AXDND1Q5T1B0 1012 aaPredicted RBP15.55■□□□□ 0.08
TTC39B-201ENST00000297615 CTR9Q6PD62 1173 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 BLZF1Q9H2G9 400 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 FBXO3Q9UK99 471 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 ZHX1Q9UKY1 873 aaPredicted RBP15.55■□□□□ 0.08
TTC39B-201ENST00000297615 MYH14Q7Z406 1995 aaKnown RBP15.55■□□□□ 0.08
TTC39B-201ENST00000297615 TOB1P50616 345 aaPredicted RBP15.55■□□□□ 0.08
TTC39B-201ENST00000297615 CFAP100Q494V2 611 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 TRAPPC3LQ5T215 181 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 STAG2Q8N3U4 1231 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 SHISA4Q96DD7 197 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 MKNK2Q9HBH9 465 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 PCDHA5Q9Y5H7 936 aa15.55■□□□□ 0.08
TTC39B-201ENST00000297615 SH3RF3Q8TEJ3 882 aaPredicted RBP15.54■□□□□ 0.08
TTC39B-201ENST00000297615 ESR2Q92731 530 aa15.54■□□□□ 0.08
TTC39B-201ENST00000297615 MAP7D2Q96T17 732 aa15.54■□□□□ 0.08
TTC39B-201ENST00000297615 LAMA4Q16363 1823 aa15.54■□□□□ 0.08
TTC39B-201ENST00000297615 RFX7Q2KHR2 1363 aa15.54■□□□□ 0.08
TTC39B-201ENST00000297615 ZNF804BA4D1E1 1349 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms