RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SPC25Q9HBM1 224 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 KIF22Q14807 665 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 NLRP10Q86W26 655 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 FRMD4BQ9Y2L6 1034 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 ADCY10Q96PN6 1610 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 PRPHP41219 470 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 FMNL3Q8IVF7 1028 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 EDC3Q96F86 508 aaKnown RBP19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 ANO1Q5XXA6 986 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 MCTP2Q6DN12 878 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 LRRC45Q96CN5 670 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 MYL10Q9BUA6 226 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 RPS6KA4O75676 772 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 CLEC4GQ6UXB4 293 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 FNBP1Q96RU3 617 aa19.94■□□□□ 0.78
CDC42EP3-201ENST00000295324 CCDC169A6NNP5 214 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 UBE3CQ15386 1083 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 REXO1Q8N1G1 1221 aaKnown RBP19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 DNAJC25Q9H1X3 360 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 CDK12Q9NYV4 1490 aaPredicted RBP19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 NEK11Q8NG66 645 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 TM6SF1Q9BZW5 370 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 ATF5Q9Y2D1 282 aaPredicted RBP19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 KIAA0754O94854 1291 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 TMCO3Q6UWJ1 677 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 EXOC7Q9UPT5 735 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 PHKA1P46020 1223 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 IFFO1Q0D2I5 559 aa19.93■□□□□ 0.78
CDC42EP3-201ENST00000295324 LRWD1Q9UFC0 647 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 NLRX1Q86UT6 975 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 TTC16Q8NEE8 873 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 JADE2Q9NQC1 790 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 ATG3Q9NT62 314 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 NPR1P16066 1061 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 DALRD3Q5D0E6 543 aaKnown RBP19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 NCAPH2Q6IBW4 605 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 DPH6Q7L8W6 267 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 ZNF654Q8IZM8 581 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 PAGR1Q9BTK6 254 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 PCP11498 1178 aaKnown RBP19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 DNM2P50570 870 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 STRN3Q13033 797 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 GNPTABQ3T906 1256 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 ATP8A2Q9NTI2 1148 aa19.92■□□□□ 0.78
CDC42EP3-201ENST00000295324 ICA1Q05084 483 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 OTUD7BQ6GQQ9 843 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 CCDC17Q96LX7 622 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 ATP10DQ9P241 1426 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 STX17P56962 302 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 CCDC91Q7Z6B0 441 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 ZNF354CQ86Y25 554 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 GOLGA6L10A0A0M3HER8 536 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 MMP10P09238 476 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 HSPA4P34932 840 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 HLTFQ14527 1009 aaKnown RBP eCLIP19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 SDR42E1Q8WUS8 393 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 GINS2Q9Y248 185 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 ZSCAN10Q96SZ4 725 aaPredicted RBP19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 PUS3Q9BZE2 481 aaKnown RBP19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 TRAF5O00463 557 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 COMMD10Q9Y6G5 202 aa19.91■□□□□ 0.78
CDC42EP3-201ENST00000295324 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 FAM160A1Q05DH4 1040 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 SUPT20HL1Q3ZLR7 823 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 CNNM4Q6P4Q7 775 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 GOLGA6L7A0A1B0GV03 622 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 EPB41P11171 864 aaKnown RBP19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 HARSP12081 509 aaKnown RBP19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 BIRC3Q13489 604 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 SNW1Q13573 536 aaKnown RBP19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 KRT40Q6A162 431 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 CDAN1Q8IWY9 1227 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 PHKBQ93100 1093 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 KCNG1Q9UIX4 513 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 TNS3Q68CZ2 1445 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 TYRO3Q06418 890 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 SNX29Q8TEQ0 813 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 CCDC113Q9H0I3 377 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 UQCRHLA0A096LP55 91 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 UQCRHP07919 91 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 RTKN2Q8IZC4 609 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 DNM3Q9UQ16 869 aa19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 MRPL11Q9Y3B7 192 aaKnown RBP19.9■□□□□ 0.78
CDC42EP3-201ENST00000295324 KIAA0753Q2KHM9 967 aa19.89■□□□□ 0.78
CDC42EP3-201ENST00000295324 TTLL6Q8N841 843 aa19.89■□□□□ 0.78
CDC42EP3-201ENST00000295324 PDE4DQ08499 809 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 LMBR1Q8WVP7 490 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 DYDC1Q8WWB3 177 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 SEC31BQ9NQW1 1179 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 SRP68Q9UHB9 627 aaKnown RBP19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 CUTAO60888 179 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 GNG11P61952 73 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 WDR44Q5JSH3 913 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 GADL1Q6ZQY3 521 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 CERKQ8TCT0 537 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 CYP27B1O15528 508 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 LMAN1P49257 510 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 CALCRLQ16602 461 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 A0A1B0GVL5 298 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 GCOM1H8Y6P7 765 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms