RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CDKL5O76039 1030 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 FDPSP14324 419 aaKnown RBP10.68□□□□□ -0.7
PDPN-201ENST00000294489 RHBDL3P58872 404 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 SART3Q15020 963 aaKnown RBP10.68□□□□□ -0.7
PDPN-201ENST00000294489 DIXDC1Q155Q3 683 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 TMEM67Q5HYA8 995 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 NFXL1Q6ZNB6 911 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 PODNQ7Z5L7 613 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 CERS5Q8N5B7 392 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 TOMM22Q9NS69 142 aa10.68□□□□□ -0.7
PDPN-201ENST00000294489 TFIP11Q9UBB9 837 aaKnown RBP10.68□□□□□ -0.7
PDPN-201ENST00000294489 USP17L12C9JPN9 530 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 USP17L21D6R901 530 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 METAP2P50579 478 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDPN-201ENST00000294489 C12orf60Q5U649 245 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 TMTC2Q8N394 836 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 TSPY26PQ9H489 355 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 FAM217BQ9NTX9 383 aaPredicted RBP10.67□□□□□ -0.7
PDPN-201ENST00000294489 SMIM22K7EJ46 135 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 IFIT3O14879 490 aaKnown RBP10.67□□□□□ -0.7
PDPN-201ENST00000294489 PLCG2P16885 1265 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 FOSBP53539 338 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 ATL3Q6DD88 541 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 LEO1Q8WVC0 666 aaPredicted RBP10.67□□□□□ -0.7
PDPN-201ENST00000294489 ESR2Q92731 530 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 TMX4Q9H1E5 349 aaPredicted RBP10.67□□□□□ -0.7
PDPN-201ENST00000294489 RBSNQ9H1K0 784 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 ORC3Q9UBD5 711 aaPredicted RBP10.67□□□□□ -0.7
PDPN-201ENST00000294489 GREB1LQ9C091 1923 aaPredicted RBP10.67□□□□□ -0.7
PDPN-201ENST00000294489 ERICH2A1L162 156 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 NTRK3Q16288 839 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 SYNE3Q6ZMZ3 975 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 C8orf76Q96K31 380 aa10.67□□□□□ -0.7
PDPN-201ENST00000294489 ZNF396Q96N95 335 aaPredicted RBP10.67□□□□□ -0.7
PDPN-201ENST00000294489 SIPA1L1O43166 1804 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 CYP2D7A0A087X1C5 515 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 CCDC69A6NI79 296 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 RIMBP2O15034 1052 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 ZBTB43O43298 467 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 BTDP43251 543 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 GTF2IP78347 998 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 RRP12Q5JTH9 1297 aaKnown RBP10.66□□□□□ -0.7
PDPN-201ENST00000294489 HHIPL2Q6UWX4 724 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 SLC12A7Q9Y666 1083 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 STK36Q9NRP7 1315 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 MYH6P13533 1939 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 MINDY4BA8MYZ0 360 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 PPFIA3O75145 1194 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 KIAA2012Q0VF49 1180 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 CCDC173Q0VFZ6 552 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 RAB11FIP4Q86YS3 637 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 SUPT20HQ8NEM7 779 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 ANKS1AQ92625 1134 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 VPS33BQ9H267 617 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 DAGLAQ9Y4D2 1042 aa10.66□□□□□ -0.7
PDPN-201ENST00000294489 STRIP1Q5VSL9 837 aa10.65□□□□□ -0.7
PDPN-201ENST00000294489 MICU3Q86XE3 530 aa10.65□□□□□ -0.7
PDPN-201ENST00000294489 PSMD1Q99460 953 aa10.65□□□□□ -0.7
PDPN-201ENST00000294489 MYH8P13535 1937 aa10.65□□□□□ -0.7
PDPN-201ENST00000294489 HDLBPQ00341 1268 aaKnown RBP10.65□□□□□ -0.7
PDPN-201ENST00000294489 GUCY1B3Q02153 619 aa10.65□□□□□ -0.7
PDPN-201ENST00000294489 EVX2Q03828 476 aa10.65□□□□□ -0.7
PDPN-201ENST00000294489 TRIM44Q96DX7 344 aaPredicted RBP10.65□□□□□ -0.7
PDPN-201ENST00000294489 ZSCAN10Q96SZ4 725 aaPredicted RBP10.65□□□□□ -0.7
PDPN-201ENST00000294489 NOL10Q9BSC4 688 aaKnown RBP10.65□□□□□ -0.7
PDPN-201ENST00000294489 TCP11L1Q9NUJ3 509 aa10.65□□□□□ -0.7
PDPN-201ENST00000294489 GOLGA8AA7E2F4 631 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 SLC3A2P08195 630 aaKnown RBP10.64□□□□□ -0.71
PDPN-201ENST00000294489 CYP2D6P10635 497 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 CDC27P30260 824 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 WTAPQ15007 396 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 PPP2R5BQ15173 497 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 DACT2Q5SW24 774 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 FBXO18Q8NFZ0 1043 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 COL4A5P29400 1685 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 USP17L8P0C7I0 530 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 ADD1P35611 737 aaKnown RBP10.64□□□□□ -0.71
PDPN-201ENST00000294489 TGFB2P61812 414 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 ENAHQ8N8S7 591 aaPredicted RBP10.64□□□□□ -0.71
PDPN-201ENST00000294489 UBAC1Q9BSL1 405 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 ARFGEF1Q9Y6D6 1849 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 FLT1P17948 1338 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 ECE2O60344 883 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 TTLL6Q8N841 843 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 BICD2Q8TD16 824 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 MCM9Q9NXL9 1143 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 TNKSO95271 1327 aa10.64□□□□□ -0.71
PDPN-201ENST00000294489 RXRAP19793 462 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 USP5P45974 858 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 PDE4BQ07343 736 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 C16orf86Q6ZW13 317 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 NBPF11Q86T75 865 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 STK11IPQ8N1F8 1099 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 TGFBRAP1Q8WUH2 860 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 IFNAR1P17181 557 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 IARSP41252 1262 aaKnown RBP10.63□□□□□ -0.71
PDPN-201ENST00000294489 NOVP48745 357 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms