RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 MMP1P03956 469 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 MAP3K12Q12852 859 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 NR5A1Q13285 461 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 TRIM65Q6PJ69 517 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 MFSD6Q6ZSS7 791 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 GRAMD1CQ8IYS0 662 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 LCORLQ8N3X6 602 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 SEC31BQ9NQW1 1179 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 ROBO1Q9Y6N7 1651 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.35■□□□□ 0.69
CHRNE-201ENST00000293780 TOP1P11387 765 aaKnown RBP19.35■□□□□ 0.69
CHRNE-201ENST00000293780 ATP2B1P20020 1258 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 ZNF827Q17R98 1081 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 ZNF446Q9NWS9 450 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 MAN1B1Q9UKM7 699 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHRNE-201ENST00000293780 STK36Q9NRP7 1315 aa19.35■□□□□ 0.69
CHRNE-201ENST00000293780 POLR2DO15514 142 aaKnown RBP19.34■□□□□ 0.69
CHRNE-201ENST00000293780 ETF1P62495 437 aaKnown RBP19.34■□□□□ 0.69
CHRNE-201ENST00000293780 FMR1Q06787 632 aaKnown RBP eCLIP19.34■□□□□ 0.69
CHRNE-201ENST00000293780 DZIP3Q86Y13 1208 aaKnown RBP19.34■□□□□ 0.69
CHRNE-201ENST00000293780 REXO1L1PQ8IX06 675 aa19.34■□□□□ 0.69
CHRNE-201ENST00000293780 SERTAD1Q9UHV2 236 aa19.34■□□□□ 0.69
CHRNE-201ENST00000293780 FBXO2Q9UK22 296 aaPredicted RBP19.34■□□□□ 0.69
CHRNE-201ENST00000293780 PCDHB6Q9Y5E3 794 aa19.34■□□□□ 0.69
CHRNE-201ENST00000293780 MROH5Q6ZUA9 1318 aa19.34■□□□□ 0.69
CHRNE-201ENST00000293780 SLC5A1P13866 664 aa19.33■□□□□ 0.69
CHRNE-201ENST00000293780 TDO2P48775 406 aa19.33■□□□□ 0.69
CHRNE-201ENST00000293780 BCAMP50895 628 aa19.33■□□□□ 0.69
CHRNE-201ENST00000293780 PIP4K2BP78356 416 aa19.33■□□□□ 0.69
CHRNE-201ENST00000293780 DHX8Q14562 1220 aaKnown RBP19.33■□□□□ 0.69
CHRNE-201ENST00000293780 RTN1Q16799 776 aa19.33■□□□□ 0.69
CHRNE-201ENST00000293780 MIGA1Q8NAN2 632 aa19.33■□□□□ 0.69
CHRNE-201ENST00000293780 OXER1Q8TDS5 423 aa19.33■□□□□ 0.69
CHRNE-201ENST00000293780 SLC4A4Q9Y6R1 1079 aa19.33■□□□□ 0.69
CHRNE-201ENST00000293780 LRP6O75581 1613 aa19.33■□□□□ 0.68
CHRNE-201ENST00000293780 WTAPQ15007 396 aa19.33■□□□□ 0.68
CHRNE-201ENST00000293780 POSTNQ15063 836 aa19.33■□□□□ 0.68
CHRNE-201ENST00000293780 SAFBQ15424 915 aaKnown RBP eCLIP19.33■□□□□ 0.68
CHRNE-201ENST00000293780 TMEM139Q8IV31 216 aa19.33■□□□□ 0.68
CHRNE-201ENST00000293780 PDILTQ8N807 584 aa19.33■□□□□ 0.68
CHRNE-201ENST00000293780 KRT23Q9C075 422 aa19.33■□□□□ 0.68
CHRNE-201ENST00000293780 NUP98P52948 1817 aa19.33■□□□□ 0.68
CHRNE-201ENST00000293780 SMIM22K7EJ46 135 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 PTPREP23469 700 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 USP49Q70CQ1 688 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 TRMT44Q8IYL2 757 aaKnown RBP19.32■□□□□ 0.68
CHRNE-201ENST00000293780 ZNF34Q8IZ26 560 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 NUP133Q8WUM0 1156 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 CNNM2Q9H8M5 875 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 ITGB4P16144 1822 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 SUSD4Q5VX71 490 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 FAM177A1Q8N128 213 aaPredicted RBP19.32■□□□□ 0.68
CHRNE-201ENST00000293780 WASF1Q92558 559 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 FAM53CQ9NYF3 392 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 SLIT2O94813 1529 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 CHD4Q14839 1912 aa19.32■□□□□ 0.68
CHRNE-201ENST00000293780 KRT222Q8N1A0 295 aa19.31■□□□□ 0.68
CHRNE-201ENST00000293780 CRACR2BQ8N4Y2 399 aaPredicted RBP19.31■□□□□ 0.68
CHRNE-201ENST00000293780 STAG1Q8WVM7 1258 aa19.31■□□□□ 0.68
CHRNE-201ENST00000293780 MED15Q96RN5 788 aa19.31■□□□□ 0.68
CHRNE-201ENST00000293780 A0A0U1RQG5 324 aaPredicted RBP19.31■□□□□ 0.68
CHRNE-201ENST00000293780 H2AFXP16104 143 aaPredicted RBP19.31■□□□□ 0.68
CHRNE-201ENST00000293780 TRIM22Q8IYM9 498 aa19.31■□□□□ 0.68
CHRNE-201ENST00000293780 MPHOSPH8Q99549 860 aa19.31■□□□□ 0.68
CHRNE-201ENST00000293780 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
CHRNE-201ENST00000293780 NFE2L3Q9Y4A8 694 aa19.31■□□□□ 0.68
CHRNE-201ENST00000293780 ADKP55263 362 aaKnown RBP19.3■□□□□ 0.68
CHRNE-201ENST00000293780 ST7Q9NRC1 585 aa19.3■□□□□ 0.68
CHRNE-201ENST00000293780 IQSEC3Q9UPP2 1182 aaPredicted RBP19.3■□□□□ 0.68
CHRNE-201ENST00000293780 PHLPP2Q6ZVD8 1323 aa19.3■□□□□ 0.68
CHRNE-201ENST00000293780 VWA3AA6NCI4 1184 aa19.3■□□□□ 0.68
CHRNE-201ENST00000293780 SLFN14P0C7P3 912 aa19.3■□□□□ 0.68
CHRNE-201ENST00000293780 CDK11BP21127 795 aaKnown RBP19.3■□□□□ 0.68
CHRNE-201ENST00000293780 SARSP49591 514 aaKnown RBP19.3■□□□□ 0.68
CHRNE-201ENST00000293780 TBX2Q13207 712 aaPredicted RBP19.3■□□□□ 0.68
CHRNE-201ENST00000293780 ARHGAP29Q52LW3 1261 aa19.3■□□□□ 0.68
CHRNE-201ENST00000293780 SHISA4Q96DD7 197 aa19.3■□□□□ 0.68
CHRNE-201ENST00000293780 FOXP1Q9H334 677 aaPredicted RBP19.3■□□□□ 0.68
CHRNE-201ENST00000293780 CABP5Q9NP86 173 aa19.3■□□□□ 0.68
CHRNE-201ENST00000293780 ANKRD36CQ5JPF3 1778 aa19.3■□□□□ 0.68
CHRNE-201ENST00000293780 FAM205CA6NFA0 338 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 ERVV-1B6SEH8 477 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 CCP110O43303 1012 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 URI1O94763 535 aaPredicted RBP19.29■□□□□ 0.68
CHRNE-201ENST00000293780 TUBB4AP04350 444 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 RILPL1Q5EBL4 403 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 SAMSN1Q9NSI8 373 aaKnown RBP19.29■□□□□ 0.68
CHRNE-201ENST00000293780 BCL9O00512 1426 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 DEXIO95424 95 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 ZNF18P17022 549 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 CLCN6P51797 869 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 GABPB1Q06547 395 aaPredicted RBP19.29■□□□□ 0.68
CHRNE-201ENST00000293780 MORC3Q14149 939 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 ZNF771Q7L3S4 317 aaPredicted RBP19.29■□□□□ 0.68
CHRNE-201ENST00000293780 ELOA2Q8IYF1 753 aaPredicted RBP19.29■□□□□ 0.68
CHRNE-201ENST00000293780 FANCBQ8NB91 859 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 SMARCE1Q969G3 411 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 CSRNP2Q9H175 543 aa19.29■□□□□ 0.68
CHRNE-201ENST00000293780 PPP2R2CQ9Y2T4 447 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms