RNA–Protein interactions for RNA: ENST00000293725.9

ZNF563-201, Transcript of zinc finger protein 563, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF563, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563-201ENST00000293725 KLHL10Q6JEL2 608 aa17.58■□□□□ 0.41
ZNF563-201ENST00000293725 ANKRD13DQ6ZTN6 518 aa17.58■□□□□ 0.41
ZNF563-201ENST00000293725 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.58■□□□□ 0.41
ZNF563-201ENST00000293725 TNRQ92752 1358 aa17.58■□□□□ 0.41
ZNF563-201ENST00000293725 FOXP2O15409 715 aa17.58■□□□□ 0.4
ZNF563-201ENST00000293725 CASP14P31944 242 aa17.58■□□□□ 0.4
ZNF563-201ENST00000293725 METAP2P50579 478 aaKnown RBP eCLIP17.58■□□□□ 0.4
ZNF563-201ENST00000293725 FKBP4Q02790 459 aaKnown RBP eCLIP17.58■□□□□ 0.4
ZNF563-201ENST00000293725 MMS22LQ6ZRQ5 1243 aa17.58■□□□□ 0.4
ZNF563-201ENST00000293725 TEX2Q8IWB9 1127 aa17.58■□□□□ 0.4
ZNF563-201ENST00000293725 RIN2Q8WYP3 895 aaPredicted RBP17.58■□□□□ 0.4
ZNF563-201ENST00000293725 A0A087WUV0 522 aaPredicted RBP17.57■□□□□ 0.4
ZNF563-201ENST00000293725 MFAP3LO75121 409 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 CPP00450 1065 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 STX17P56962 302 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 TUBBP07437 444 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 TRIM29Q14134 588 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 SUGP1Q8IWZ8 645 aaKnown RBP17.57■□□□□ 0.4
ZNF563-201ENST00000293725 CCDC148Q8NFR7 591 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 SMARCC1Q92922 1105 aaPredicted RBP17.57■□□□□ 0.4
ZNF563-201ENST00000293725 GDAP1L1Q96MZ0 367 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 MYO6Q9UM54 1294 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 TTF2Q9UNY4 1162 aaKnown RBP17.57■□□□□ 0.4
ZNF563-201ENST00000293725 ZMYM6O95789 1325 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 PRPF6O94906 941 aaKnown RBP17.57■□□□□ 0.4
ZNF563-201ENST00000293725 PLCD1P51178 756 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 SEC31BQ9NQW1 1179 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 DENND2AQ9ULE3 1009 aa17.57■□□□□ 0.4
ZNF563-201ENST00000293725 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
ZNF563-201ENST00000293725 SARSP49591 514 aaKnown RBP17.56■□□□□ 0.4
ZNF563-201ENST00000293725 MCTP2Q6DN12 878 aa17.56■□□□□ 0.4
ZNF563-201ENST00000293725 WDR93Q6P2C0 686 aa17.56■□□□□ 0.4
ZNF563-201ENST00000293725 CTCFLQ8NI51 663 aaPredicted RBP17.56■□□□□ 0.4
ZNF563-201ENST00000293725 LTN1O94822 1766 aa17.56■□□□□ 0.4
ZNF563-201ENST00000293725 UBE2Q2LH0YL09 131 aa17.56■□□□□ 0.4
ZNF563-201ENST00000293725 LIG3P49916 1009 aa17.56■□□□□ 0.4
ZNF563-201ENST00000293725 FXR1P51114 621 aaKnown RBP eCLIP17.56■□□□□ 0.4
ZNF563-201ENST00000293725 EIF5P55010 431 aaKnown RBP17.56■□□□□ 0.4
ZNF563-201ENST00000293725 APTXQ7Z2E3 356 aaKnown RBP17.56■□□□□ 0.4
ZNF563-201ENST00000293725 ATG9AQ7Z3C6 839 aa17.56■□□□□ 0.4
ZNF563-201ENST00000293725 MICU3Q86XE3 530 aa17.56■□□□□ 0.4
ZNF563-201ENST00000293725 ZNF213O14771 459 aa17.55■□□□□ 0.4
ZNF563-201ENST00000293725 CDKL5O76039 1030 aa17.55■□□□□ 0.4
ZNF563-201ENST00000293725 AARSP49588 968 aaKnown RBP eCLIP17.55■□□□□ 0.4
ZNF563-201ENST00000293725 NT5DC1Q5TFE4 455 aa17.55■□□□□ 0.4
ZNF563-201ENST00000293725 VIPAS39Q9H9C1 493 aa17.55■□□□□ 0.4
ZNF563-201ENST00000293725 HPCAL4Q9UM19 191 aa17.55■□□□□ 0.4
ZNF563-201ENST00000293725 ERLIN2O94905 339 aa17.54■□□□□ 0.4
ZNF563-201ENST00000293725 CCT5P48643 541 aa17.54■□□□□ 0.4
ZNF563-201ENST00000293725 CPLX2Q6PUV4 134 aaKnown RBP17.54■□□□□ 0.4
ZNF563-201ENST00000293725 RGPD2P0DJD1 1756 aa17.54■□□□□ 0.4
ZNF563-201ENST00000293725 GYPCP04921 128 aa17.54■□□□□ 0.4
ZNF563-201ENST00000293725 ARHGAP25P42331 645 aa17.54■□□□□ 0.4
ZNF563-201ENST00000293725 ERVK-24P63145 666 aa17.54■□□□□ 0.4
ZNF563-201ENST00000293725 CNGA4Q8IV77 575 aa17.54■□□□□ 0.4
ZNF563-201ENST00000293725 ELOA2Q8IYF1 753 aaPredicted RBP17.54■□□□□ 0.4
ZNF563-201ENST00000293725 ADD3Q9UEY8 706 aaKnown RBP17.54■□□□□ 0.4
ZNF563-201ENST00000293725 WWC3Q9ULE0 1092 aa17.54■□□□□ 0.4
ZNF563-201ENST00000293725 CDHR2Q9BYE9 1310 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 NWD2Q9ULI1 1742 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 EXOC5O00471 708 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 ERCC5P28715 1186 aaPredicted RBP17.53■□□□□ 0.4
ZNF563-201ENST00000293725 PBX1P40424 430 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 AMPD2Q01433 879 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 STIM1Q13586 685 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 TRIML1Q8N9V2 468 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 KAT2BQ92831 832 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 SLF1Q9BQI6 1058 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 RABEP2Q9H5N1 569 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 SENP2Q9HC62 589 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 ANGEL1Q9UNK9 670 aaKnown RBP17.53■□□□□ 0.4
ZNF563-201ENST00000293725 CPDO75976 1380 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 SYNRGQ9UMZ2 1314 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 ZMYND10O75800 440 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 IARSP41252 1262 aaKnown RBP17.53■□□□□ 0.4
ZNF563-201ENST00000293725 FILIP1LQ4L180 1135 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 ZNF790Q6PG37 636 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 NKX2-3Q8TAU0 364 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 FAM107BQ9H098 131 aa17.53■□□□□ 0.4
ZNF563-201ENST00000293725 GGCXP38435 758 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 USP14P54578 494 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 MAP9Q49MG5 647 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 LRRC24Q50LG9 513 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 SPATA1Q5VX52 437 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 CCDC91Q7Z6B0 441 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 GSPT2Q8IYD1 628 aaKnown RBP17.52■□□□□ 0.4
ZNF563-201ENST00000293725 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 FBXO2Q9UK22 296 aaPredicted RBP17.52■□□□□ 0.4
ZNF563-201ENST00000293725 C4AP0C0L4 1744 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 C4BP0C0L5 1744 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 ENC1O14682 589 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 CCT6AP40227 531 aaKnown RBP17.52■□□□□ 0.4
ZNF563-201ENST00000293725 ZNF594Q96JF6 807 aaPredicted RBP17.52■□□□□ 0.4
ZNF563-201ENST00000293725 PUS7LQ9H0K6 701 aaKnown RBP17.52■□□□□ 0.4
ZNF563-201ENST00000293725 HDAC6Q9UBN7 1215 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 TRIM10Q9UDY6 481 aa17.52■□□□□ 0.4
ZNF563-201ENST00000293725 BTBD18B2RXH4 712 aa17.51■□□□□ 0.39
ZNF563-201ENST00000293725 RANBP6O60518 1105 aaKnown RBP17.51■□□□□ 0.39
ZNF563-201ENST00000293725 CD44P16070 742 aaKnown RBP17.51■□□□□ 0.39
ZNF563-201ENST00000293725 CDC25AP30304 524 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms