RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 CEP290O15078 2479 aa11.67□□□□□ -0.54
HMHB1-201ENST00000289448 FLT1P17948 1338 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 APBB1O00213 710 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 BAG3O95817 575 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 BCRP11274 1271 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 MS4A1P11836 297 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 CYP7A1P22680 504 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
HMHB1-201ENST00000289448 GADL1Q6ZQY3 521 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 ERC1Q8IUD2 1116 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 RPAP2Q8IXW5 612 aaPredicted RBP11.66□□□□□ -0.54
HMHB1-201ENST00000289448 ZNF333Q96JL9 665 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 DNAJC18Q9H819 358 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 PI4KBQ9UBF8 816 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 DDX19BQ9UMR2 479 aa11.66□□□□□ -0.54
HMHB1-201ENST00000289448 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
HMHB1-201ENST00000289448 IDH1O75874 414 aaKnown RBP11.65□□□□□ -0.54
HMHB1-201ENST00000289448 PLCG2P16885 1265 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
HMHB1-201ENST00000289448 CAP2P40123 477 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 PSMC4P43686 418 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 SPP2Q13103 211 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 KIF22Q14807 665 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 ARHGEF6Q15052 776 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 TREML2Q5T2D2 321 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 FASTKD5Q7L8L6 764 aaKnown RBP11.65□□□□□ -0.54
HMHB1-201ENST00000289448 METTL16Q86W50 562 aaKnown RBP11.65□□□□□ -0.54
HMHB1-201ENST00000289448 MIGA1Q8NAN2 632 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 SH3TC2Q8TF17 1288 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 PARK7Q99497 189 aaKnown RBP11.65□□□□□ -0.54
HMHB1-201ENST00000289448 NOL10Q9BSC4 688 aaKnown RBP11.65□□□□□ -0.54
HMHB1-201ENST00000289448 SAP30BPQ9UHR5 308 aaKnown RBP11.65□□□□□ -0.54
HMHB1-201ENST00000289448 PALD1Q9ULE6 856 aa11.65□□□□□ -0.54
HMHB1-201ENST00000289448 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.55
HMHB1-201ENST00000289448 DOCK1Q14185 1865 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 IGSF3O75054 1194 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 MYCP01106 439 aaPredicted RBP11.64□□□□□ -0.55
HMHB1-201ENST00000289448 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
HMHB1-201ENST00000289448 OSBPP22059 807 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 SLC4A8Q2Y0W8 1093 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 SLC9C1Q4G0N8 1177 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 HSP90AB4PQ58FF6 505 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 MAGEB6Q8N7X4 407 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 DHX36Q9H2U1 1008 aaKnown RBP11.64□□□□□ -0.55
HMHB1-201ENST00000289448 SRRDQ9UH36 339 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 HERC5Q9UII4 1024 aaKnown RBP11.64□□□□□ -0.55
HMHB1-201ENST00000289448 AGTPBP1Q9UPW5 1226 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 SLC45A1Q9Y2W3 748 aa11.64□□□□□ -0.55
HMHB1-201ENST00000289448 SIPA1L1O43166 1804 aa11.63□□□□□ -0.55
HMHB1-201ENST00000289448 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
HMHB1-201ENST00000289448 GNRH1P01148 92 aa11.63□□□□□ -0.55
HMHB1-201ENST00000289448 HMGCS2P54868 508 aa11.63□□□□□ -0.55
HMHB1-201ENST00000289448 ZNF280CQ8ND82 737 aa11.63□□□□□ -0.55
HMHB1-201ENST00000289448 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
HMHB1-201ENST00000289448 BCL11AQ9H165 835 aa11.63□□□□□ -0.55
HMHB1-201ENST00000289448 MAST2Q6P0Q8 1798 aa11.63□□□□□ -0.55
HMHB1-201ENST00000289448 PTPRFP10586 1907 aa11.62□□□□□ -0.55
HMHB1-201ENST00000289448 USP17L5A8MUK1 530 aa11.62□□□□□ -0.55
HMHB1-201ENST00000289448 HMMRO75330 724 aa11.62□□□□□ -0.55
HMHB1-201ENST00000289448 PRMT2P55345 433 aa11.62□□□□□ -0.55
HMHB1-201ENST00000289448 PRKCZQ05513 592 aa11.62□□□□□ -0.55
HMHB1-201ENST00000289448 MAP3K12Q12852 859 aa11.62□□□□□ -0.55
HMHB1-201ENST00000289448 NBPF11Q86T75 865 aa11.62□□□□□ -0.55
HMHB1-201ENST00000289448 FOXP4Q8IVH2 680 aaPredicted RBP11.62□□□□□ -0.55
HMHB1-201ENST00000289448 CLASRPQ8N2M8 674 aaKnown RBP11.62□□□□□ -0.55
HMHB1-201ENST00000289448 EDC3Q96F86 508 aaKnown RBP11.62□□□□□ -0.55
HMHB1-201ENST00000289448 RIOK1Q9BRS2 568 aaKnown RBP11.62□□□□□ -0.55
HMHB1-201ENST00000289448 GABRQQ9UN88 632 aa11.62□□□□□ -0.55
HMHB1-201ENST00000289448 RANBP2P49792 3224 aaKnown RBP11.62□□□□□ -0.55
HMHB1-201ENST00000289448 RAB11FIP3O75154 756 aa11.61□□□□□ -0.55
HMHB1-201ENST00000289448 GDF11O95390 407 aa11.61□□□□□ -0.55
HMHB1-201ENST00000289448 PDE6AP16499 860 aa11.61□□□□□ -0.55
HMHB1-201ENST00000289448 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
HMHB1-201ENST00000289448 MTFR1Q15390 333 aa11.61□□□□□ -0.55
HMHB1-201ENST00000289448 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
HMHB1-201ENST00000289448 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
HMHB1-201ENST00000289448 PROCA1Q8NCQ7 364 aaPredicted RBP11.61□□□□□ -0.55
HMHB1-201ENST00000289448 WDR18Q9BV38 432 aa11.61□□□□□ -0.55
HMHB1-201ENST00000289448 CDK5RAP2Q96SN8 1893 aa11.61□□□□□ -0.55
HMHB1-201ENST00000289448 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 TCRBV5S4A2TA0A5A2 114 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 GOLIM4O00461 696 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 ASNSP08243 561 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 IFIT2P09913 472 aaKnown RBP11.6□□□□□ -0.55
HMHB1-201ENST00000289448 HOXD10P28358 340 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 USP5P45974 858 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 FCGRTP55899 365 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 EVX2Q03828 476 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 MTMR2Q13614 643 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 SLC9C2Q5TAH2 1124 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
HMHB1-201ENST00000289448 CRACR2BQ8N4Y2 399 aaPredicted RBP11.6□□□□□ -0.55
HMHB1-201ENST00000289448 ANKRD13CQ8N6S4 541 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 RAET1EQ8TD07 263 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 SMCR8Q8TEV9 937 aaPredicted RBP11.6□□□□□ -0.55
HMHB1-201ENST00000289448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.6□□□□□ -0.55
HMHB1-201ENST00000289448 DNAJC2Q99543 621 aaKnown RBP11.6□□□□□ -0.55
HMHB1-201ENST00000289448 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 ZBTB21Q9ULJ3 1066 aa11.6□□□□□ -0.55
HMHB1-201ENST00000289448 FOCADQ5VW36 1801 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms