RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 KRT2P35908 639 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 LPIN2Q92539 896 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 PPLO60437 1756 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 TMCO5BA8MYB1 307 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 MYO1BO43795 1136 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 TRIM21P19474 475 aaKnown RBP14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 CTSWP56202 376 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 ZNF569Q5MCW4 686 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 SPECC1LQ69YQ0 1117 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 PIK3AP1Q6ZUJ8 805 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 DESI2Q9BSY9 194 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 TCP11L1Q9NUJ3 509 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 RCOR1Q9UKL0 485 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 WWC3Q9ULE0 1092 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 CCDC96Q2M329 555 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 FRMPD1Q5SYB0 1578 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 STOX1Q6ZVD7 989 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 MROH1Q8NDA8 1641 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 TMEM94Q12767 1356 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 TSPY3P0CV98 308 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 TSPY8P0CW00 308 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 FKBP15Q5T1M5 1219 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 EEF2KMTQ96G04 330 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 UIMC1Q96RL1 719 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 UBA5Q9GZZ9 404 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 ZBTB1Q9Y2K1 713 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 NRKQ7Z2Y5 1582 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 PRKAB2O43741 272 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 GYG1P46976 350 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 RILPL1Q5EBL4 403 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 FAM47AQ5JRC9 791 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 IFNL3Q8IZI9 196 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 CEP112Q8N8E3 955 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 FBF1Q8TES7 1133 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 NLRP3Q96P20 1036 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 NAA15Q9BXJ9 866 aaKnown RBP14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 BLZF1Q9H2G9 400 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 AATFQ9NY61 560 aaKnown RBP eCLIP14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 GUCA1BQ9UMX6 200 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 CDC42BPGQ6DT37 1551 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 ERVV-2B6SEH9 535 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 KCNQ4P56696 695 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 PPARDQ03181 441 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 PRPF4BQ13523 1007 aaKnown RBP14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 AKNAD1Q5T1N1 836 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 GRAMD1CQ8IYS0 662 aa14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 CLTCQ00610 1675 aaKnown RBP14.17□□□□□ -0.14
SLC6A1-201ENST00000287766 DEPDC5O75140 1603 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 CAPZA3Q96KX2 299 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 BMP2KQ9NSY1 1161 aaPredicted RBP14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 AKR1B10O60218 316 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 CUTAO60888 179 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 DEXIO95424 95 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 SSR1P43307 286 aaKnown RBP14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 ZSCAN26Q16670 478 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 IGSF22Q8N9C0 903 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 GOLPH3LQ9H4A5 285 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 SEC31BQ9NQW1 1179 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 PCDHA5Q9Y5H7 936 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 CEP170BQ9Y4F5 1589 aaPredicted RBP14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 POSTNQ15063 836 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 CCDC121Q6ZUS5 278 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 LINC00301Q8NCQ3 95 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 NEK11Q8NG66 645 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 SETDB2Q96T68 719 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 SLAIN2Q9P270 581 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 CTNND2Q9UQB3 1225 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 ATP1A3P13637 1013 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 GNAT2P19087 354 aa14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 ARHGEF28Q8N1W1 1705 aaKnown RBP14.16□□□□□ -0.14
SLC6A1-201ENST00000287766 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 UBXN1Q04323 297 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 DMTNQ08495 405 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 CCDC144BQ3MJ40 725 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 APOA5Q6Q788 366 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 RTEL1Q9NZ71 1219 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 SAP30BPQ9UHR5 308 aaKnown RBP14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 PCCAP05165 728 aaPredicted RBP14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 NOP2P46087 812 aaKnown RBP14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 SCARF1Q14162 830 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 MRFAP1L1Q96HT8 127 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 SERPINA10Q9UK55 444 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 MACROD2A1Z1Q3 448 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 CTAGE9A4FU28 777 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 ASIC1P78348 528 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 PICALMQ13492 652 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 MSL1Q68DK7 614 aa14.15□□□□□ -0.14
SLC6A1-201ENST00000287766 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
SLC6A1-201ENST00000287766 H7C1W4 665 aa14.14□□□□□ -0.15
SLC6A1-201ENST00000287766 PDE8BO95263 885 aa14.14□□□□□ -0.15
SLC6A1-201ENST00000287766 CMA1P23946 247 aa14.14□□□□□ -0.15
SLC6A1-201ENST00000287766 NBPF14Q5TI25 921 aa14.14□□□□□ -0.15
SLC6A1-201ENST00000287766 NBPF10Q6P3W6 841 aaKnown RBP14.14□□□□□ -0.15
SLC6A1-201ENST00000287766 ZNF654Q8IZM8 581 aa14.14□□□□□ -0.15
SLC6A1-201ENST00000287766 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
SLC6A1-201ENST00000287766 NR5A1Q13285 461 aa14.14□□□□□ -0.15
SLC6A1-201ENST00000287766 HLFQ16534 295 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms