RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 ANKRD18AQ8IVF6 992 aa12.08□□□□□ -0.48
ERCC3-201ENST00000285398 XAGE2Q96GT9 111 aa12.08□□□□□ -0.48
ERCC3-201ENST00000285398 CARD6Q9BX69 1037 aa12.08□□□□□ -0.48
ERCC3-201ENST00000285398 GOLPH3LQ9H4A5 285 aa12.08□□□□□ -0.48
ERCC3-201ENST00000285398 IFNKQ9P0W0 207 aa12.08□□□□□ -0.48
ERCC3-201ENST00000285398 ADAM21Q9UKJ8 722 aa12.08□□□□□ -0.48
ERCC3-201ENST00000285398 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
ERCC3-201ENST00000285398 RRP15Q9Y3B9 282 aaKnown RBP12.08□□□□□ -0.48
ERCC3-201ENST00000285398 MYH3P11055 1940 aa12.08□□□□□ -0.48
ERCC3-201ENST00000285398 ACTN2P35609 894 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 SCARF1Q14162 830 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 ICE2Q659A1 982 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 LEKR1Q6ZMV7 388 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 VGLL2Q8N8G2 317 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 ENGASEQ8NFI3 743 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 PDE8BO95263 885 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 KLRK1P26718 216 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 LMAN1P49257 510 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
ERCC3-201ENST00000285398 GPR101Q96P66 508 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-201ENST00000285398 LCMT1Q9UIC8 334 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-201ENST00000285398 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 TNRC6CQ9HCJ0 1690 aaKnown RBP12.07□□□□□ -0.48
ERCC3-201ENST00000285398 RPS8P62241 208 aaKnown RBP12.07□□□□□ -0.48
ERCC3-201ENST00000285398 KRT32Q14532 448 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 TRIM65Q6PJ69 517 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 REXO1L1PQ8IX06 675 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 CCDC34Q96HJ3 373 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 ZNF396Q96N95 335 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-201ENST00000285398 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
ERCC3-201ENST00000285398 SDF4Q9BRK5 362 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 BRMS1Q9HCU9 246 aa12.07□□□□□ -0.48
ERCC3-201ENST00000285398 ZSCAN12O43309 604 aa12.06□□□□□ -0.48
ERCC3-201ENST00000285398 R3HDM1Q15032 1099 aaKnown RBP12.06□□□□□ -0.48
ERCC3-201ENST00000285398 NAA16Q6N069 864 aaPredicted RBP12.06□□□□□ -0.48
ERCC3-201ENST00000285398 PARP3Q9Y6F1 533 aa12.06□□□□□ -0.48
ERCC3-201ENST00000285398 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
ERCC3-201ENST00000285398 FKBP4Q02790 459 aaKnown RBP eCLIP12.06□□□□□ -0.48
ERCC3-201ENST00000285398 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
ERCC3-201ENST00000285398 FSIP1Q8NA03 581 aa12.06□□□□□ -0.48
ERCC3-201ENST00000285398 SMARCC2Q8TAQ2 1214 aa12.06□□□□□ -0.48
ERCC3-201ENST00000285398 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
ERCC3-201ENST00000285398 MINPP1Q9UNW1 487 aa12.06□□□□□ -0.48
ERCC3-201ENST00000285398 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
ERCC3-201ENST00000285398 PHKA1P46020 1223 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 ME1P48163 572 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-201ENST00000285398 FLAD1Q8NFF5 587 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 RPGRQ92834 1020 aaKnown RBP12.05□□□□□ -0.48
ERCC3-201ENST00000285398 FSD1Q9BTV5 496 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 FUT8Q9BYC5 575 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-201ENST00000285398 ZNF609O15014 1411 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 A0A087WWV3 80 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 GOLIM4O00461 696 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 BCAMP50895 628 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
ERCC3-201ENST00000285398 RABGGTAQ92696 567 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 LLPHQ9BRT6 129 aaKnown RBP12.05□□□□□ -0.48
ERCC3-201ENST00000285398 COL24A1Q17RW2 1714 aa12.05□□□□□ -0.48
ERCC3-201ENST00000285398 GOLGA6L9A6NEM1 432 aa12.04□□□□□ -0.48
ERCC3-201ENST00000285398 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
ERCC3-201ENST00000285398 CHRNA5P30532 468 aa12.04□□□□□ -0.48
ERCC3-201ENST00000285398 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
ERCC3-201ENST00000285398 SPEF2Q9C093 1822 aa12.04□□□□□ -0.48
ERCC3-201ENST00000285398 CCDC151A5D8V7 595 aa12.04□□□□□ -0.48
ERCC3-201ENST00000285398 GYG1P46976 350 aa12.04□□□□□ -0.48
ERCC3-201ENST00000285398 MRPS27Q92552 414 aaKnown RBP12.04□□□□□ -0.48
ERCC3-201ENST00000285398 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
ERCC3-201ENST00000285398 FTOQ9C0B1 505 aaKnown RBP eCLIP12.04□□□□□ -0.48
ERCC3-201ENST00000285398 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
ERCC3-201ENST00000285398 JAG2Q9Y219 1238 aa12.04□□□□□ -0.48
ERCC3-201ENST00000285398 MAGEA9P43362 315 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 USP28Q96RU2 1077 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 PARD6BQ9BYG5 372 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 BSDC1Q9NW68 430 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-201ENST00000285398 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
ERCC3-201ENST00000285398 PPP2R3AQ06190 1150 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 SCRN1Q12765 414 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 BRD3Q15059 726 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 PUM3Q15397 648 aaKnown RBP12.03□□□□□ -0.48
ERCC3-201ENST00000285398 DPCR1Q3MIW9 517 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 TTC31Q49AM3 519 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-201ENST00000285398 TTC39AQ5SRH9 613 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 Q6ZUG5 572 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 RSRC2Q7L4I2 434 aaKnown RBP12.03□□□□□ -0.48
ERCC3-201ENST00000285398 TXNRD3Q86VQ6 643 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 CCDC125Q86Z20 511 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 FMR1NBQ8N0W7 255 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-201ENST00000285398 TMX1Q9H3N1 280 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-201ENST00000285398 PPP1R1BQ9UD71 204 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-201ENST00000285398 AKAP2Q9Y2D5 859 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 MROH5Q6ZUA9 1318 aa12.03□□□□□ -0.48
ERCC3-201ENST00000285398 CBFA2T2O43439 604 aa12.02□□□□□ -0.48
ERCC3-201ENST00000285398 ATP5JP18859 108 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms