RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SPATS2Q86XZ4 545 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 OR6P1Q8NGX9 317 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 PARD3BQ8TEW8 1205 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 ELMO3Q96BJ8 720 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 CLIP3Q96DZ5 547 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 CNNM2Q9H8M5 875 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 BRMS1Q9HCU9 246 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 BRD7Q9NPI1 651 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 CASKIN1Q8WXD9 1431 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 TSPY2A6NKD2 308 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 GAS7O60861 476 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 IL33O95760 270 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 TSPY3P0CV98 308 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 TSPY8P0CW00 308 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 SOX9P48436 509 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 ETF1P62495 437 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 TSPY1Q01534 308 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 LMNB2Q03252 620 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 CHAF1AQ13111 956 aaPredicted RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 PUM3Q15397 648 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 POMZP3Q6PJE2 187 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 DDX53Q86TM3 631 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 PHC3Q8NDX5 983 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 PPHLN1Q8NEY8 458 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 NINJ1Q92982 152 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 HOOK2Q96ED9 719 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 MTA3Q9BTC8 594 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 WBP1LQ9NX94 342 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 MAGI3Q5TCQ9 1506 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 WASLO00401 505 aaPredicted RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 EPB41L2O43491 1005 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 TLL1O43897 1013 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 PF4V1P10720 104 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 ERVK-9P63128 1117 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 NFE2Q16621 373 aaPredicted RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 DALRD3Q5D0E6 543 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 IFIT1BQ5T764 474 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 IER5Q5VY09 327 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 PTCRAQ6ISU1 281 aaPredicted RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 NLRP13Q86W25 1043 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 FAM160A2Q8N612 972 aaPredicted RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 OSMRQ99650 979 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 ARFGAP3Q9NP61 516 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 CABP5Q9NP86 173 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 CNTN3Q9P232 1028 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 MAPRE3Q9UPY8 281 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 LRCH1Q9Y2L9 728 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 F13A1P00488 732 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 TP53P04637 393 aaPredicted RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 RARAP10276 462 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 GEMIN4P57678 1058 aaKnown RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 SH3BP2P78314 561 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 GUCY1A3Q02108 690 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 TRIM42Q8IWZ5 723 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 SHDQ96IW2 340 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 HSH2DQ96JZ2 352 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 NUDT16L1Q9BRJ7 211 aaKnown RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 CCDC8Q9H0W5 538 aaPredicted RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 GPAMQ9HCL2 828 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 SPEF1Q9Y4P9 236 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 TRIM75PA6NK02 468 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 FIBPO43427 364 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 KCNJ6P48051 423 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 TERF1P54274 439 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 CENPCQ03188 943 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 ACAP2Q15057 778 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 LLGL2Q6P1M3 1020 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 KRT26Q7Z3Y9 468 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 SLFN12Q8IYM2 578 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 YTHDC1Q96MU7 727 aaKnown RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 HERPUD2Q9BSE4 406 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 SPATA9Q9BWV2 254 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 PHAXQ9H814 394 aaKnown RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 ZMYM5Q9UJ78 669 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 SCINQ9Y6U3 715 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 TCOF1Q13428 1488 aaKnown RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 DNAJC25-GNG10A0A024R161 153 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 GRIN3BO60391 1043 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 CD2BP2O95400 341 aaKnown RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 STAT4Q14765 748 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 RGL3Q3MIN7 710 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 ZC3H12BQ5HYM0 836 aaKnown RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 EFCAB2Q5VUJ9 269 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 CNPY4Q8N129 248 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 SKA1Q96BD8 255 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 AVENQ9NQS1 362 aaPredicted RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 ABCC10Q5T3U5 1492 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 ARHGAP35Q9NRY4 1499 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 A0A1W2PP55 124 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 KDM4FA0A1W2PPD8 638 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 TBX3O15119 743 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 GJB6O95452 261 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 IGHA2P01877 340 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 NEK3P51956 506 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 HYAL2Q12891 473 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 ICE2Q659A1 982 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 C1orf127Q8N9H9 656 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 TRIM56Q9BRZ2 755 aaKnown RBP3.3□□□□□ -1.88
CHD1-201ENST00000284049 GBP3Q9H0R5 595 aa3.3□□□□□ -1.88
CHD1-201ENST00000284049 IFT22Q9H7X7 185 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms