RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 TSPY2A6NKD2 308 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 CTAGE5O15320 804 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 KRT40Q6A162 431 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 ANKRD7Q92527 254 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 POLR3EQ9NVU0 708 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 LAMB1P07942 1786 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 SSBP05455 408 aaKnown RBP eCLIP15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 FAM160A1Q05DH4 1040 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 KARSQ15046 597 aaKnown RBP15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 DZIP1Q86YF9 867 aaKnown RBP15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 ZNF202O95125 648 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 GNG11P61952 73 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 CCDC144BQ3MJ40 725 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 LINC00301Q8NCQ3 95 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 UTP14AQ9BVJ6 771 aaKnown RBP15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 TEX13AQ9BXU3 409 aaPredicted RBP15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 ANGEL1Q9UNK9 670 aaKnown RBP15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 COL24A1Q17RW2 1714 aa15.78■□□□□ 0.12
LPCAT1-201ENST00000283415 GIGYF2Q6Y7W6 1299 aaKnown RBP15.77■□□□□ 0.12
LPCAT1-201ENST00000283415 ZPR1O75312 459 aa15.77■□□□□ 0.12
LPCAT1-201ENST00000283415 PDE6AP16499 860 aa15.77■□□□□ 0.12
LPCAT1-201ENST00000283415 MCAMP43121 646 aa15.77■□□□□ 0.12
LPCAT1-201ENST00000283415 NLRP5P59047 1200 aa15.77■□□□□ 0.12
LPCAT1-201ENST00000283415 PNOCQ13519 176 aa15.77■□□□□ 0.12
LPCAT1-201ENST00000283415 TTF1Q15361 905 aaPredicted RBP15.77■□□□□ 0.12
LPCAT1-201ENST00000283415 AMOTL1Q8IY63 956 aa15.77■□□□□ 0.12
LPCAT1-201ENST00000283415 ZHX3Q9H4I2 956 aa15.77■□□□□ 0.12
LPCAT1-201ENST00000283415 BTBD18B2RXH4 712 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 UBE2Q2LH0YL09 131 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 AXDND1Q5T1B0 1012 aaPredicted RBP15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 ADALQ6DHV7 355 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 TTLL11Q8NHH1 800 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 SMTNL1A8MU46 457 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 FAM98CQ17RN3 349 aaKnown RBP15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 CCDC152Q4G0S7 254 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 FAM47AQ5JRC9 791 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 ANO1Q5XXA6 986 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 TMCO3Q6UWJ1 677 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 NBPF5PQ86XG9 351 aaPredicted RBP15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 IQCA1Q86XH1 822 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 HSD3B7Q9H2F3 369 aa15.77■□□□□ 0.11
LPCAT1-201ENST00000283415 ADD2P35612 726 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 ZNF174Q15697 407 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 ARHGAP29Q52LW3 1261 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 TRMT1LQ7Z2T5 733 aaKnown RBP15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 NBPF11Q86T75 865 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 TACC3Q9Y6A5 838 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 TPM1P09493 284 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 CTSWP56202 376 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 IKQ13123 557 aaPredicted RBP15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 ANKRD18AQ8IVF6 992 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 KCNG4Q8TDN1 519 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 PIH1D3Q9NQM4 214 aaKnown RBP15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 USP27XA6NNY8 438 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 ERCC6LQ2NKX8 1250 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 MYSM1Q5VVJ2 828 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 XPO4Q9C0E2 1151 aaKnown RBP15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 PODXL2Q9NZ53 605 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 VPS54Q9P1Q0 977 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 PAXBP1Q9Y5B6 917 aa15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 V9GY48 417 aaPredicted RBP15.76■□□□□ 0.11
LPCAT1-201ENST00000283415 ALX1Q15699 326 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 TSR1Q2NL82 804 aaKnown RBP15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 DPCR1Q3MIW9 517 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 DIS3L2Q8IYB7 885 aaKnown RBP15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 GRAMD1CQ8IYS0 662 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 FBXO18Q8NFZ0 1043 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 CTCFLQ8NI51 663 aaPredicted RBP15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 MAST2Q6P0Q8 1798 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 CYP19A1P11511 503 aaPredicted RBP15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 SYCP1Q15431 976 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 ENOX2Q16206 610 aaKnown RBP15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 NTRK3Q16288 839 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 SPATA5Q8NB90 893 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 AATFQ9NY61 560 aaKnown RBP eCLIP15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 HPSEQ9Y251 543 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 KIF28PB7ZC32 967 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 POLR2DO15514 142 aaKnown RBP15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 FAM193AP78312 1265 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
LPCAT1-201ENST00000283415 PDE8AO60658 829 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 YEATS4O95619 227 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 IFIT1BQ5T764 474 aaKnown RBP15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 SMAP1Q8IYB5 467 aaPredicted RBP15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 FAM217BQ9NTX9 383 aaPredicted RBP15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 BAZ2BQ9UIF8 2168 aaKnown RBP15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 UQCRFS1P1P0C7P4 283 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 SENP2Q9HC62 589 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 FAM170AA1A519 330 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 SLU7O95391 586 aaKnown RBP15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 UBE3CQ15386 1083 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 NYAP1Q6ZVC0 841 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 CATIPQ7Z7H3 387 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 PPFIBP1Q86W92 1011 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 MAP3K14Q99558 947 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 MYH2Q9UKX2 1941 aa15.74■□□□□ 0.11
LPCAT1-201ENST00000283415 MYH6P13533 1939 aa15.73■□□□□ 0.11
LPCAT1-201ENST00000283415 DNA2P51530 1060 aa15.73■□□□□ 0.11
LPCAT1-201ENST00000283415 ZNF34Q8IZ26 560 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms