RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 ZIC5Q96T25 663 aa20.89■□□□□ 0.94
ATG3-201ENST00000283290 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.89■□□□□ 0.94
ATG3-201ENST00000283290 LAMB1P07942 1786 aa20.89■□□□□ 0.93
ATG3-201ENST00000283290 ATAD5Q96QE3 1844 aa20.89■□□□□ 0.93
ATG3-201ENST00000283290 NPM3O75607 178 aaKnown RBP20.89■□□□□ 0.93
ATG3-201ENST00000283290 CHMLP26374 656 aa20.89■□□□□ 0.93
ATG3-201ENST00000283290 CCDC102AQ96A19 550 aa20.89■□□□□ 0.93
ATG3-201ENST00000283290 HELLSQ9NRZ9 838 aa20.89■□□□□ 0.93
ATG3-201ENST00000283290 MYH8P13535 1937 aa20.88■□□□□ 0.93
ATG3-201ENST00000283290 SHROOM1Q2M3G4 852 aaPredicted RBP20.88■□□□□ 0.93
ATG3-201ENST00000283290 ZKSCAN4Q969J2 545 aaPredicted RBP20.88■□□□□ 0.93
ATG3-201ENST00000283290 HOOK2Q96ED9 719 aa20.88■□□□□ 0.93
ATG3-201ENST00000283290 DNAJC18Q9H819 358 aa20.88■□□□□ 0.93
ATG3-201ENST00000283290 COL2A1P02458 1487 aaPredicted RBP20.87■□□□□ 0.93
ATG3-201ENST00000283290 USP17L12C9JPN9 530 aa20.87■□□□□ 0.93
ATG3-201ENST00000283290 USP17L21D6R901 530 aa20.87■□□□□ 0.93
ATG3-201ENST00000283290 POLR3DP05423 398 aaPredicted RBP20.87■□□□□ 0.93
ATG3-201ENST00000283290 INPP5BP32019 993 aa20.87■□□□□ 0.93
ATG3-201ENST00000283290 MKRN3Q13064 507 aaKnown RBP20.87■□□□□ 0.93
ATG3-201ENST00000283290 RRP1BQ14684 758 aaKnown RBP20.87■□□□□ 0.93
ATG3-201ENST00000283290 BMP2KLQ5H9B9 411 aa20.87■□□□□ 0.93
ATG3-201ENST00000283290 DCAF15Q66K64 600 aa20.87■□□□□ 0.93
ATG3-201ENST00000283290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.87■□□□□ 0.93
ATG3-201ENST00000283290 DYNLL2Q96FJ2 89 aa20.87■□□□□ 0.93
ATG3-201ENST00000283290 WRNIP1Q96S55 665 aa20.87■□□□□ 0.93
ATG3-201ENST00000283290 NOGQ13253 232 aa20.86■□□□□ 0.93
ATG3-201ENST00000283290 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.86■□□□□ 0.93
ATG3-201ENST00000283290 CERS3Q8IU89 383 aa20.86■□□□□ 0.93
ATG3-201ENST00000283290 ANKRD13AQ8IZ07 590 aa20.86■□□□□ 0.93
ATG3-201ENST00000283290 SLC44A5Q8NCS7 719 aa20.86■□□□□ 0.93
ATG3-201ENST00000283290 VGLL4Q14135 290 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 CTR9Q6PD62 1173 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 ZNF341Q9BYN7 854 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.85■□□□□ 0.93
ATG3-201ENST00000283290 CCDC171Q6TFL3 1326 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 MINDY4BA8MYZ0 360 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 MAP2K2P36507 400 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 TDO2P48775 406 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 MAP3K9P80192 1104 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 CCDC84Q86UT8 332 aaPredicted RBP20.85■□□□□ 0.93
ATG3-201ENST00000283290 IFNL3Q8IZI9 196 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 SLC10A4Q96EP9 437 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 ELP3Q9H9T3 547 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 ATP8A2Q9NTI2 1148 aa20.85■□□□□ 0.93
ATG3-201ENST00000283290 PATL2C9JE40 543 aaKnown RBP20.84■□□□□ 0.93
ATG3-201ENST00000283290 KIF23Q02241 960 aaPredicted RBP20.84■□□□□ 0.93
ATG3-201ENST00000283290 CRACR2BQ8N4Y2 399 aaPredicted RBP20.84■□□□□ 0.93
ATG3-201ENST00000283290 DHX36Q9H2U1 1008 aaKnown RBP20.84■□□□□ 0.93
ATG3-201ENST00000283290 PI4KBQ9UBF8 816 aa20.84■□□□□ 0.93
ATG3-201ENST00000283290 DOCK1Q14185 1865 aa20.84■□□□□ 0.93
ATG3-201ENST00000283290 UNCXA6NJT0 531 aa20.83■□□□□ 0.92
ATG3-201ENST00000283290 PHF20L1A8MW92 1017 aa20.83■□□□□ 0.92
ATG3-201ENST00000283290 HIP1O00291 1037 aa20.83■□□□□ 0.92
ATG3-201ENST00000283290 HLA-DOAP06340 250 aa20.83■□□□□ 0.92
ATG3-201ENST00000283290 JAG1P78504 1218 aa20.83■□□□□ 0.92
ATG3-201ENST00000283290 HSPA1AP0DMV8 641 aaKnown RBP20.82■□□□□ 0.92
ATG3-201ENST00000283290 HSPA1BP0DMV9 641 aaKnown RBP20.82■□□□□ 0.92
ATG3-201ENST00000283290 HSPD1P10809 573 aaKnown RBP20.82■□□□□ 0.92
ATG3-201ENST00000283290 GNAT2P19087 354 aa20.82■□□□□ 0.92
ATG3-201ENST00000283290 SPRYD7Q5W111 196 aa20.82■□□□□ 0.92
ATG3-201ENST00000283290 WNK4Q96J92 1243 aa20.82■□□□□ 0.92
ATG3-201ENST00000283290 ZNF112Q9UJU3 913 aa20.82■□□□□ 0.92
ATG3-201ENST00000283290 CSADQ9Y600 493 aa20.82■□□□□ 0.92
ATG3-201ENST00000283290 SNCAIPQ9Y6H5 919 aa20.82■□□□□ 0.92
ATG3-201ENST00000283290 GDF11O95390 407 aa20.81■□□□□ 0.92
ATG3-201ENST00000283290 GJA5P36382 358 aa20.81■□□□□ 0.92
ATG3-201ENST00000283290 MAP3K10Q02779 954 aa20.81■□□□□ 0.92
ATG3-201ENST00000283290 C12orf60Q5U649 245 aa20.81■□□□□ 0.92
ATG3-201ENST00000283290 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
ATG3-201ENST00000283290 TRIM34Q9BYJ4 488 aa20.81■□□□□ 0.92
ATG3-201ENST00000283290 NAPBQ9H115 298 aa20.81■□□□□ 0.92
ATG3-201ENST00000283290 INCENPQ9NQS7 918 aa20.81■□□□□ 0.92
ATG3-201ENST00000283290 TTC6Q86TZ1 520 aa20.8■□□□□ 0.92
ATG3-201ENST00000283290 WBP1LQ9NX94 342 aa20.8■□□□□ 0.92
ATG3-201ENST00000283290 SERPINB13Q9UIV8 391 aa20.8■□□□□ 0.92
ATG3-201ENST00000283290 PHIPQ8WWQ0 1821 aa20.8■□□□□ 0.92
ATG3-201ENST00000283290 HAND2P61296 217 aa20.8■□□□□ 0.92
ATG3-201ENST00000283290 MAP2K1Q02750 393 aaPredicted RBP20.8■□□□□ 0.92
ATG3-201ENST00000283290 PTH1RQ03431 593 aa20.8■□□□□ 0.92
ATG3-201ENST00000283290 CTDSPL2Q05D32 466 aa20.8■□□□□ 0.92
ATG3-201ENST00000283290 OPTNQ96CV9 577 aa20.8■□□□□ 0.92
ATG3-201ENST00000283290 FGAP02671 866 aa20.79■□□□□ 0.92
ATG3-201ENST00000283290 SHMT1P34896 483 aa20.79■□□□□ 0.92
ATG3-201ENST00000283290 TACC3Q9Y6A5 838 aa20.79■□□□□ 0.92
ATG3-201ENST00000283290 SGSM2O43147 1006 aa20.78■□□□□ 0.92
ATG3-201ENST00000283290 TBC1D12O60347 775 aa20.78■□□□□ 0.92
ATG3-201ENST00000283290 PRDM1O75626 825 aa20.78■□□□□ 0.92
ATG3-201ENST00000283290 ZBTB48P10074 688 aaPredicted RBP20.78■□□□□ 0.92
ATG3-201ENST00000283290 GABPAQ06546 454 aa20.78■□□□□ 0.92
ATG3-201ENST00000283290 FOXP4Q8IVH2 680 aaPredicted RBP20.78■□□□□ 0.92
ATG3-201ENST00000283290 OTUD5Q96G74 571 aa20.78■□□□□ 0.92
ATG3-201ENST00000283290 ESYT1Q9BSJ8 1104 aa20.78■□□□□ 0.92
ATG3-201ENST00000283290 NACAP1Q9BZK3 213 aa20.78■□□□□ 0.92
ATG3-201ENST00000283290 ARPP21Q9UBL0 812 aaPredicted RBP20.78■□□□□ 0.92
ATG3-201ENST00000283290 HERC5Q9UII4 1024 aaKnown RBP20.78■□□□□ 0.92
ATG3-201ENST00000283290 LAMA4Q16363 1823 aa20.77■□□□□ 0.92
ATG3-201ENST00000283290 CDC45O75419 566 aa20.77■□□□□ 0.92
ATG3-201ENST00000283290 TICAM2Q86XR7 235 aa20.77■□□□□ 0.92
ATG3-201ENST00000283290 SPDYE5A6NIY4 337 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms