RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ZNF804AQ7Z570 1209 aa20.85■□□□□ 0.93
CAPN1-201ENST00000279247 RBM17Q96I25 401 aaKnown RBP20.85■□□□□ 0.93
CAPN1-201ENST00000279247 GGA1Q9UJY5 639 aa20.85■□□□□ 0.93
CAPN1-201ENST00000279247 RCOR1Q9UKL0 485 aa20.85■□□□□ 0.93
CAPN1-201ENST00000279247 ZNF219Q9P2Y4 722 aaPredicted RBP20.85■□□□□ 0.93
CAPN1-201ENST00000279247 SAP30BPQ9UHR5 308 aaKnown RBP20.85■□□□□ 0.93
CAPN1-201ENST00000279247 PCDHA7Q9UN72 937 aa20.85■□□□□ 0.93
CAPN1-201ENST00000279247 F8W031 263 aaPredicted RBP20.84■□□□□ 0.93
CAPN1-201ENST00000279247 IFIT1BQ5T764 474 aaKnown RBP20.84■□□□□ 0.93
CAPN1-201ENST00000279247 CCDC73Q6ZRK6 1079 aa20.84■□□□□ 0.93
CAPN1-201ENST00000279247 ENAHQ8N8S7 591 aaPredicted RBP20.84■□□□□ 0.93
CAPN1-201ENST00000279247 LEMD3Q9Y2U8 911 aa20.84■□□□□ 0.93
CAPN1-201ENST00000279247 SH3RF3Q8TEJ3 882 aaPredicted RBP20.84■□□□□ 0.93
CAPN1-201ENST00000279247 DYNLL2Q96FJ2 89 aa20.84■□□□□ 0.93
CAPN1-201ENST00000279247 TYRO3Q06418 890 aa20.83■□□□□ 0.93
CAPN1-201ENST00000279247 FANCBQ8NB91 859 aa20.83■□□□□ 0.93
CAPN1-201ENST00000279247 TGFBRAP1Q8WUH2 860 aa20.83■□□□□ 0.93
CAPN1-201ENST00000279247 POLLQ9UGP5 575 aa20.83■□□□□ 0.93
CAPN1-201ENST00000279247 IQCA1Q86XH1 822 aa20.83■□□□□ 0.92
CAPN1-201ENST00000279247 TRIM22Q8IYM9 498 aa20.83■□□□□ 0.92
CAPN1-201ENST00000279247 ZSCAN10Q96SZ4 725 aaPredicted RBP20.83■□□□□ 0.92
CAPN1-201ENST00000279247 BRIP1Q9BX63 1249 aa20.83■□□□□ 0.92
CAPN1-201ENST00000279247 DDX19AQ9NUU7 478 aaKnown RBP20.83■□□□□ 0.92
CAPN1-201ENST00000279247 LUZP1Q86V48 1076 aa20.82■□□□□ 0.92
CAPN1-201ENST00000279247 MAPKAPK5Q8IW41 473 aa20.82■□□□□ 0.92
CAPN1-201ENST00000279247 CAMKK2Q96RR4 588 aa20.82■□□□□ 0.92
CAPN1-201ENST00000279247 FUCA2Q9BTY2 467 aa20.82■□□□□ 0.92
CAPN1-201ENST00000279247 CLSTN2Q9H4D0 955 aa20.82■□□□□ 0.92
CAPN1-201ENST00000279247 CD209Q9NNX6 404 aa20.82■□□□□ 0.92
CAPN1-201ENST00000279247 TSPY2A6NKD2 308 aa20.82■□□□□ 0.92
CAPN1-201ENST00000279247 ANO6Q4KMQ2 910 aa20.82■□□□□ 0.92
CAPN1-201ENST00000279247 SPTY2D1Q68D10 685 aaPredicted RBP20.81■□□□□ 0.92
CAPN1-201ENST00000279247 TDRD7Q8NHU6 1098 aaKnown RBP20.81■□□□□ 0.92
CAPN1-201ENST00000279247 WDR66Q8TBY9 1149 aa20.81■□□□□ 0.92
CAPN1-201ENST00000279247 BTBD18B2RXH4 712 aa20.81■□□□□ 0.92
CAPN1-201ENST00000279247 LINC00301Q8NCQ3 95 aa20.81■□□□□ 0.92
CAPN1-201ENST00000279247 SLC44A5Q8NCS7 719 aa20.81■□□□□ 0.92
CAPN1-201ENST00000279247 SPTLC2O15270 562 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 KINO60870 393 aaKnown RBP20.8■□□□□ 0.92
CAPN1-201ENST00000279247 CRY2Q49AN0 593 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 SASS6Q6UVJ0 657 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 DNAJC25Q9H1X3 360 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 MFSD14BQ5SR56 506 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 MRVI1Q9Y6F6 885 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 IRS2Q9Y4H2 1338 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 PLEKHA8P1O95397 391 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 SEC23AQ15436 765 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 ANO1Q5XXA6 986 aa20.8■□□□□ 0.92
CAPN1-201ENST00000279247 NOL10Q9BSC4 688 aaKnown RBP20.8■□□□□ 0.92
CAPN1-201ENST00000279247 ADCY5O95622 1261 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 TBC1D16Q8TBP0 767 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 RTEL1Q9NZ71 1219 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 FMNL1O95466 1100 aaPredicted RBP20.79■□□□□ 0.92
CAPN1-201ENST00000279247 IFNAR1P17181 557 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 GTF2IP78347 998 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 AKAP17AQ02040 695 aaKnown RBP20.79■□□□□ 0.92
CAPN1-201ENST00000279247 NR5A1Q13285 461 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 BRAPQ7Z569 592 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 CATIPQ7Z7H3 387 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 SDF4Q9BRK5 362 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 ANAPC4Q9UJX5 808 aa20.79■□□□□ 0.92
CAPN1-201ENST00000279247 NDUFA8P51970 172 aa20.78■□□□□ 0.92
CAPN1-201ENST00000279247 SLC15A2Q16348 729 aa20.78■□□□□ 0.92
CAPN1-201ENST00000279247 TMTC2Q8N394 836 aa20.78■□□□□ 0.92
CAPN1-201ENST00000279247 DIS3L2Q8IYB7 885 aaKnown RBP20.78■□□□□ 0.92
CAPN1-201ENST00000279247 ZNF622Q969S3 477 aaKnown RBP eCLIP20.78■□□□□ 0.927e-7■■■□□ 15.2
CAPN1-201ENST00000279247 VPS54Q9P1Q0 977 aa20.78■□□□□ 0.92
CAPN1-201ENST00000279247 DOK7Q18PE1 504 aa20.78■□□□□ 0.92
CAPN1-201ENST00000279247 CRACR2BQ8N4Y2 399 aaPredicted RBP20.78■□□□□ 0.92
CAPN1-201ENST00000279247 PDLIM2Q96JY6 352 aa20.78■□□□□ 0.92
CAPN1-201ENST00000279247 ZNF830Q96NB3 372 aaPredicted RBP20.78■□□□□ 0.92
CAPN1-201ENST00000279247 MXD3Q9BW11 206 aa20.78■□□□□ 0.92
CAPN1-201ENST00000279247 ATP8A2Q9NTI2 1148 aa20.78■□□□□ 0.92
CAPN1-201ENST00000279247 V9GY48 417 aaPredicted RBP20.78■□□□□ 0.92
CAPN1-201ENST00000279247 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.92
CAPN1-201ENST00000279247 SF3B2Q13435 895 aaKnown RBP20.77■□□□□ 0.92
CAPN1-201ENST00000279247 SPECC1Q5M775 1068 aa20.77■□□□□ 0.92
CAPN1-201ENST00000279247 NLGN1Q8N2Q7 840 aa20.77■□□□□ 0.92
CAPN1-201ENST00000279247 MRPS27Q92552 414 aaKnown RBP20.77■□□□□ 0.92
CAPN1-201ENST00000279247 MKNK2Q9HBH9 465 aa20.77■□□□□ 0.92
CAPN1-201ENST00000279247 ATP2B4P23634 1241 aa20.77■□□□□ 0.91
CAPN1-201ENST00000279247 MSNP26038 577 aaKnown RBP20.77■□□□□ 0.91
CAPN1-201ENST00000279247 BTDP43251 543 aa20.77■□□□□ 0.91
CAPN1-201ENST00000279247 CLIC6Q96NY7 704 aa20.77■□□□□ 0.91
CAPN1-201ENST00000279247 CCDC196A0A1B0GTZ2 297 aa20.76■□□□□ 0.91
CAPN1-201ENST00000279247 BBOX1O75936 387 aa20.76■□□□□ 0.91
CAPN1-201ENST00000279247 SLC3A2P08195 630 aaKnown RBP20.76■□□□□ 0.91
CAPN1-201ENST00000279247 TFAP4Q01664 338 aa20.76■□□□□ 0.91
CAPN1-201ENST00000279247 PDE4BQ07343 736 aa20.76■□□□□ 0.91
CAPN1-201ENST00000279247 SNW1Q13573 536 aaKnown RBP20.76■□□□□ 0.91
CAPN1-201ENST00000279247 SPC24Q8NBT2 197 aa20.76■□□□□ 0.91
CAPN1-201ENST00000279247 OXER1Q8TDS5 423 aa20.76■□□□□ 0.91
CAPN1-201ENST00000279247 FAM160A1Q05DH4 1040 aa20.76■□□□□ 0.91
CAPN1-201ENST00000279247 SAFBQ15424 915 aaKnown RBP eCLIP20.76■□□□□ 0.91
CAPN1-201ENST00000279247 AP5Z1O43299 807 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 WDHD1O75717 1129 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-201ENST00000279247 BAG3O95817 575 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 PLCD1P51178 756 aa20.75■□□□□ 0.91
CAPN1-201ENST00000279247 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.75■□□□□ 0.91
CAPN1-201ENST00000279247 ARPP21Q9UBL0 812 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms