RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 NLGN1Q8N2Q7 840 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 CDK5RAP3Q96JB5 506 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
SEC16A-201ENST00000277537 MRC1P22897 1456 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 PLCG2P16885 1265 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 FGFR2P21802 821 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 LMOD1P29536 600 aaPredicted RBP10.32□□□□□ -0.76
SEC16A-201ENST00000277537 NR5A1Q13285 461 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 RC3H1Q5TC82 1133 aaKnown RBP10.32□□□□□ -0.76
SEC16A-201ENST00000277537 PRR5LQ6MZQ0 368 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 PIK3AP1Q6ZUJ8 805 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 DBNDD1Q9H9R9 158 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 H0YIN7 160 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 ZNF202O95125 648 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 CCDC186Q7Z3E2 898 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 PLIN2Q99541 437 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 CBX8Q9HC52 389 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 PRDM10Q9NQV6 1147 aa10.32□□□□□ -0.76
SEC16A-201ENST00000277537 CTDNEP1O95476 244 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 NAPAP54920 295 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 VGLL2Q8N8G2 317 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 PGBD1Q96JS3 809 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 ARPP21Q9UBL0 812 aaPredicted RBP10.31□□□□□ -0.76
SEC16A-201ENST00000277537 VWA3AA6NCI4 1184 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 PPEF1O14829 653 aaPredicted RBP10.31□□□□□ -0.76
SEC16A-201ENST00000277537 NDUFA8P51970 172 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 KRI1Q8N9T8 703 aaKnown RBP10.31□□□□□ -0.76
SEC16A-201ENST00000277537 SLC44A5Q8NCS7 719 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 CCDC47Q96A33 483 aaKnown RBP10.31□□□□□ -0.76
SEC16A-201ENST00000277537 CTDP1Q9Y5B0 961 aaPredicted RBP10.31□□□□□ -0.76
SEC16A-201ENST00000277537 CNTNAP4Q9C0A0 1308 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 CLCN1P35523 988 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 ATL3Q6DD88 541 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 SH3RF3Q8TEJ3 882 aaPredicted RBP10.31□□□□□ -0.76
SEC16A-201ENST00000277537 LY9Q9HBG7 655 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 GPCPD1Q9NPB8 672 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 ATP8A2Q9NTI2 1148 aa10.31□□□□□ -0.76
SEC16A-201ENST00000277537 A0A0U1RQG5 324 aaPredicted RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 SEMA3EO15041 775 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 BBOX1O75936 387 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 RXRBP28702 533 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 GPSM2P81274 684 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 KIF23Q02241 960 aaPredicted RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 C2CD5Q86YS7 1000 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 PNMA1Q8ND90 353 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 ANKRD20A12PQ8NF67 263 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 STAMQ92783 540 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 ZHX3Q9H4I2 956 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 TRPM3Q9HCF6 1732 aaPredicted RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 USP17L3A6NCW0 530 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 USP17L4A6NCW7 530 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 SMTNL1A8MU46 457 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 UBE2Q2LH0YL09 131 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 POLR2DO15514 142 aaKnown RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 RILPL1Q5EBL4 403 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 USP17L1Q7RTZ2 530 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 NOSTRINQ8IVI9 506 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 C17orf53Q8N3J3 647 aaPredicted RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 SMARCC2Q8TAQ2 1214 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 GPKOWQ92917 476 aaPredicted RBP eCLIP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 SMARCE1Q969G3 411 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 ZNF512BQ96KM6 892 aaPredicted RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 UIMC1Q96RL1 719 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 EYA3Q99504 573 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 USP40Q9NVE5 1235 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 RBM28Q9NW13 759 aaKnown RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 STK32BQ9NY57 414 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 ABCC12Q96J65 1359 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 UBA7P41226 1012 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 LIFRP42702 1097 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 RBM26Q5T8P6 1007 aaKnown RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 ADALQ6DHV7 355 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 ADGRA1Q86SQ6 560 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 NSUN4Q96CB9 384 aaKnown RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 ALDH8A1Q9H2A2 487 aaPredicted RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 VEZTQ9HBM0 779 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 CD209Q9NNX6 404 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 DCP1AQ9NPI6 582 aaPredicted RBP10.3□□□□□ -0.76
SEC16A-201ENST00000277537 KCNH3Q9ULD8 1083 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 LRRC37A3O60309 1634 aa10.3□□□□□ -0.76
SEC16A-201ENST00000277537 ALDH1B1P30837 517 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 GNAQP50148 359 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 FAM177A1Q8N128 213 aaPredicted RBP10.29□□□□□ -0.76
SEC16A-201ENST00000277537 FNBP4Q8N3X1 1017 aaPredicted RBP10.29□□□□□ -0.76
SEC16A-201ENST00000277537 ALS2Q96Q42 1657 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 PLEKHG2Q9H7P9 1386 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 SMIM22K7EJ46 135 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 RRP9O43818 475 aaKnown RBP10.29□□□□□ -0.76
SEC16A-201ENST00000277537 PLEKHA8P1O95397 391 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 PFKFB1P16118 471 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 PTGS1P23219 599 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 TRMT1Q9NXH9 659 aaKnown RBP10.29□□□□□ -0.76
SEC16A-201ENST00000277537 RCOR1Q9UKL0 485 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 CLSTN1O94985 981 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 YEATS4O95619 227 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 TPM1P09493 284 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 PARP1P09874 1014 aaKnown RBP10.29□□□□□ -0.76
SEC16A-201ENST00000277537 FDPSP14324 419 aaKnown RBP10.29□□□□□ -0.76
SEC16A-201ENST00000277537 PDE6BP35913 854 aa10.29□□□□□ -0.76
SEC16A-201ENST00000277537 CTR9Q6PD62 1173 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms