RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SH3RF3Q8TEJ3 882 aaPredicted RBP11.16□□□□□ -0.62
TRIM55-201ENST00000276573 ANP32BQ92688 251 aaKnown RBP11.16□□□□□ -0.62
TRIM55-201ENST00000276573 PPP1R9BQ96SB3 815 aa11.16□□□□□ -0.62
TRIM55-201ENST00000276573 NOL10Q9BSC4 688 aaKnown RBP11.16□□□□□ -0.62
TRIM55-201ENST00000276573 SLC26A6Q9BXS9 759 aa11.16□□□□□ -0.62
TRIM55-201ENST00000276573 FTOQ9C0B1 505 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRIM55-201ENST00000276573 KIF28PB7ZC32 967 aa11.15□□□□□ -0.62
TRIM55-201ENST00000276573 USP5P45974 858 aa11.15□□□□□ -0.62
TRIM55-201ENST00000276573 C12orf60Q5U649 245 aa11.15□□□□□ -0.62
TRIM55-201ENST00000276573 NBPF11Q86T75 865 aa11.15□□□□□ -0.62
TRIM55-201ENST00000276573 CRACR2BQ8N4Y2 399 aaPredicted RBP11.15□□□□□ -0.62
TRIM55-201ENST00000276573 WASF1Q92558 559 aa11.15□□□□□ -0.62
TRIM55-201ENST00000276573 FUCA2Q9BTY2 467 aa11.15□□□□□ -0.62
TRIM55-201ENST00000276573 DDX19AQ9NUU7 478 aaKnown RBP11.15□□□□□ -0.62
TRIM55-201ENST00000276573 MCM9Q9NXL9 1143 aa11.15□□□□□ -0.62
TRIM55-201ENST00000276573 DACT1Q9NYF0 836 aa11.15□□□□□ -0.62
TRIM55-201ENST00000276573 KIAA1551Q9HCM1 1747 aa11.15□□□□□ -0.63
TRIM55-201ENST00000276573 NRXN2Q9P2S2 1712 aa11.15□□□□□ -0.63
TRIM55-201ENST00000276573 ANKRD31Q8N7Z5 1873 aa11.15□□□□□ -0.63
TRIM55-201ENST00000276573 MROH7-TTC4A0A0A0MT08 1334 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 FAM205AQ6ZU69 1335 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 MYH15Q9Y2K3 1946 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 PDE4BQ07343 736 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 CCDC173Q0VFZ6 552 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 MYSM1Q5VVJ2 828 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 CERS3Q8IU89 383 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 BICD2Q8TD16 824 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 TBC1D22AQ8WUA7 517 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 NUP133Q8WUM0 1156 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
TRIM55-201ENST00000276573 RTFDC1Q9BY42 306 aaPredicted RBP11.14□□□□□ -0.63
TRIM55-201ENST00000276573 NUP62CLQ9H1M0 184 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
TRIM55-201ENST00000276573 DUOX1Q9NRD9 1551 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 GPR75-ASB3A0A0A6YYF3 556 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 NR1I2O75469 434 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 TRIM29Q14134 588 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 IFIT1BQ5T764 474 aaKnown RBP11.14□□□□□ -0.63
TRIM55-201ENST00000276573 CATIPQ7Z7H3 387 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 TRIM22Q8IYM9 498 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 MPNDQ8N594 471 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 RNF214Q8ND24 703 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 MASTLQ96GX5 879 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 COA1Q9GZY4 146 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 CLIC4Q9Y696 253 aa11.14□□□□□ -0.63
TRIM55-201ENST00000276573 UBE2Q2LH0YL09 131 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 RIMBP2O15034 1052 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 YEATS4O95619 227 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 U2AF2P26368 475 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRIM55-201ENST00000276573 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 UVSSAQ2YD98 709 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 FAM47AQ5JRC9 791 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 MFSD14BQ5SR56 506 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
TRIM55-201ENST00000276573 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 LINC00301Q8NCQ3 95 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 TGFBRAP1Q8WUH2 860 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 ZC3H12CQ9C0D7 883 aaKnown RBP11.13□□□□□ -0.63
TRIM55-201ENST00000276573 TNMDQ9H2S6 317 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 CLSTN2Q9H4D0 955 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 POLR3EQ9NVU0 708 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 LRRC37AA6NMS7 1700 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
TRIM55-201ENST00000276573 DEXIO95424 95 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 CALM1P0DP23 149 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 CALM2P0DP24 149 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 CALM3P0DP25 149 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 BTDP43251 543 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 NT5C2P49902 561 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 GTF2IP78347 998 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 TROAPQ12815 778 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 STK38Q15208 465 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 CAMK4Q16566 473 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 MAP3K11Q16584 847 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 MSL1Q68DK7 614 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 CMTR1Q8N1G2 835 aaKnown RBP11.12□□□□□ -0.63
TRIM55-201ENST00000276573 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 PCDHA7Q9UN72 937 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 LTBP1Q14766 1721 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 PLCG2P16885 1265 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 ME1P48163 572 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 ADALQ6DHV7 355 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 OLFM4Q6UX06 510 aa11.12□□□□□ -0.63
TRIM55-201ENST00000276573 RBM43Q6ZSC3 357 aaKnown RBP11.12□□□□□ -0.63
TRIM55-201ENST00000276573 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRIM55-201ENST00000276573 RBM28Q9NW13 759 aaKnown RBP11.12□□□□□ -0.63
TRIM55-201ENST00000276573 GAKO14976 1311 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 A0A1W2PQ27 194 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 A0A1W2PQ64 194 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 A0A1W2PQD8 194 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 TSPY2A6NKD2 308 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 SPTLC2O15270 562 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 DDAH1O94760 285 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 CCDC192P0DO97 292 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 FUT2Q10981 343 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 SF3A1Q15459 793 aaKnown RBP11.11□□□□□ -0.63
TRIM55-201ENST00000276573 SLC15A2Q16348 729 aa11.11□□□□□ -0.63
TRIM55-201ENST00000276573 DPP8Q6V1X1 898 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms