RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 PHRF1Q9P1Y6 1649 aaKnown RBP21.31■■□□□ 1
SSC4D-201ENST00000275560 ZBTB43O43298 467 aa21.31■■□□□ 1
SSC4D-201ENST00000275560 CABP4P57796 275 aa21.31■■□□□ 1
SSC4D-201ENST00000275560 NR1I3Q14994 352 aa21.31■■□□□ 1
SSC4D-201ENST00000275560 CERS3Q8IU89 383 aa21.31■■□□□ 1
SSC4D-201ENST00000275560 EXOC4Q96A65 974 aa21.31■■□□□ 1
SSC4D-201ENST00000275560 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.31■■□□□ 1
SSC4D-201ENST00000275560 FAN1Q9Y2M0 1017 aa21.31■■□□□ 1
SSC4D-201ENST00000275560 AKR1B15C9JRZ8 316 aaPredicted RBP21.3■■□□□ 1
SSC4D-201ENST00000275560 ANKRD65E5RJM6 399 aa21.3■■□□□ 1
SSC4D-201ENST00000275560 CSB-PGBD3P0DP91 1061 aa21.3■■□□□ 1
SSC4D-201ENST00000275560 NR5A1Q13285 461 aa21.3■■□□□ 1
SSC4D-201ENST00000275560 ACRBPQ8NEB7 543 aa21.3■■□□□ 1
SSC4D-201ENST00000275560 PCDHB6Q9Y5E3 794 aa21.3■■□□□ 1
SSC4D-201ENST00000275560 RASSF4Q9H2L5 321 aa21.3■■□□□ 1
SSC4D-201ENST00000275560 ECM29Q5VYK3 1845 aa21.3■■□□□ 1
SSC4D-201ENST00000275560 MORC3Q14149 939 aa21.29■■□□□ 1
SSC4D-201ENST00000275560 GOLGA5Q8TBA6 731 aa21.29■■□□□ 1
SSC4D-201ENST00000275560 ENOX1Q8TC92 643 aaKnown RBP21.29■■□□□ 1
SSC4D-201ENST00000275560 PLEKHA4Q9H4M7 779 aa21.29■■□□□ 1
SSC4D-201ENST00000275560 MCAMP43121 646 aa21.29■■□□□ 1
SSC4D-201ENST00000275560 CCDC57Q2TAC2 916 aa21.29■■□□□ 1
SSC4D-201ENST00000275560 KIF4BQ2VIQ3 1234 aa21.29■■□□□ 1
SSC4D-201ENST00000275560 JAKMIP3Q5VZ66 844 aa21.29■■□□□ 1
SSC4D-201ENST00000275560 IGSF22Q8N9C0 903 aa21.29■■□□□ 1
SSC4D-201ENST00000275560 RNF216Q9NWF9 866 aaPredicted RBP21.29■■□□□ 1
SSC4D-201ENST00000275560 FBXO2Q9UK22 296 aaPredicted RBP21.29■■□□□ 1
SSC4D-201ENST00000275560 AFMP43652 599 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 VSNL1P62760 191 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 NOSTRINQ8IVI9 506 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 SYNE4Q8N205 404 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 ZKSCAN3Q9BRR0 538 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 RRP15Q9Y3B9 282 aaKnown RBP21.28■■□□□ 1
SSC4D-201ENST00000275560 IDH1O75874 414 aaKnown RBP21.28■■□□□ 1
SSC4D-201ENST00000275560 CDKL5O76039 1030 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 ZFYP08048 801 aaPredicted RBP21.28■■□□□ 1
SSC4D-201ENST00000275560 CD44P16070 742 aaKnown RBP21.28■■□□□ 1
SSC4D-201ENST00000275560 ACTN2P35609 894 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 TNNT3P45378 269 aaPredicted RBP21.28■■□□□ 1
SSC4D-201ENST00000275560 BRD3Q15059 726 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 CHRNA2Q15822 529 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 NUTM2AQ8IVF1 878 aaPredicted RBP21.28■■□□□ 1
SSC4D-201ENST00000275560 DIS3L2Q8IYB7 885 aaKnown RBP21.28■■□□□ 1
SSC4D-201ENST00000275560 SLC35F6Q8N357 371 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 DDX60Q8IY21 1712 aaKnown RBP21.28■■□□□ 1
SSC4D-201ENST00000275560 PDE4CQ08493 712 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 TMEM67Q5HYA8 995 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 SRLQ86TD4 932 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 DDX17Q92841 729 aaKnown RBP21.28■■□□□ 1
SSC4D-201ENST00000275560 LY9Q9HBG7 655 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 CDC23Q9UJX2 597 aa21.28■■□□□ 1
SSC4D-201ENST00000275560 CDC25AP30304 524 aa21.27■■□□□ 1
SSC4D-201ENST00000275560 CASP14P31944 242 aa21.27■■□□□ 1
SSC4D-201ENST00000275560 SARSP49591 514 aaKnown RBP21.27■■□□□ 1
SSC4D-201ENST00000275560 CTDSPL2Q05D32 466 aa21.27■■□□□ 1
SSC4D-201ENST00000275560 CPLX2Q6PUV4 134 aaKnown RBP21.27■■□□□ 1
SSC4D-201ENST00000275560 APTXQ7Z2E3 356 aaKnown RBP21.27■■□□□ 1
SSC4D-201ENST00000275560 IGDCC4Q8TDY8 1250 aa21.27■■□□□ 1
SSC4D-201ENST00000275560 IPO4Q8TEX9 1081 aaKnown RBP21.27■■□□□ 1
SSC4D-201ENST00000275560 ATG3Q9NT62 314 aa21.27■■□□□ 1
SSC4D-201ENST00000275560 A0A1B0GTH6 734 aa21.27■□□□□ 0.99
SSC4D-201ENST00000275560 KIF5CO60282 957 aa21.27■□□□□ 0.99
SSC4D-201ENST00000275560 MLKLQ8NB16 471 aa21.27■□□□□ 0.99
SSC4D-201ENST00000275560 RGS22Q8NE09 1264 aa21.27■□□□□ 0.99
SSC4D-201ENST00000275560 CABLES1Q8TDN4 633 aa21.27■□□□□ 0.99
SSC4D-201ENST00000275560 OXER1Q8TDS5 423 aa21.27■□□□□ 0.99
SSC4D-201ENST00000275560 FAM89AQ96GI7 184 aa21.27■□□□□ 0.99
SSC4D-201ENST00000275560 TSPYL1Q9H0U9 437 aa21.27■□□□□ 0.99
SSC4D-201ENST00000275560 TACC3Q9Y6A5 838 aa21.27■□□□□ 0.99
SSC4D-201ENST00000275560 MYO1BO43795 1136 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 KRT28Q7Z3Y7 464 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 A0A087X0B3 334 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 FAM205CA6NFA0 338 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 CIAO1O76071 339 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 SKIDA1Q1XH10 827 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 TAF7LQ5H9L4 462 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 PPFIBP1Q86W92 1011 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 STAMQ92783 540 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 CCDC102AQ96A19 550 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 DCAF5Q96JK2 942 aa21.26■□□□□ 0.99
SSC4D-201ENST00000275560 MYO5AQ9Y4I1 1855 aaKnown RBP21.26■□□□□ 0.99
SSC4D-201ENST00000275560 FXR1P51114 621 aaKnown RBP eCLIP21.25■□□□□ 0.99
SSC4D-201ENST00000275560 SSRP1Q08945 709 aaKnown RBP21.25■□□□□ 0.99
SSC4D-201ENST00000275560 HDXQ7Z353 690 aa21.25■□□□□ 0.99
SSC4D-201ENST00000275560 NOA1Q8NC60 698 aaKnown RBP21.25■□□□□ 0.99
SSC4D-201ENST00000275560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.25■□□□□ 0.99
SSC4D-201ENST00000275560 CSRNP2Q9H175 543 aa21.25■□□□□ 0.99
SSC4D-201ENST00000275560 PIH1D3Q9NQM4 214 aaKnown RBP21.25■□□□□ 0.99
SSC4D-201ENST00000275560 L1RE1Q9UN81 338 aa21.25■□□□□ 0.99
SSC4D-201ENST00000275560 SLIT3O75094 1523 aa21.25■□□□□ 0.99
SSC4D-201ENST00000275560 ACTN4O43707 911 aaKnown RBP21.25■□□□□ 0.99
SSC4D-201ENST00000275560 PTPREP23469 700 aa21.25■□□□□ 0.99
SSC4D-201ENST00000275560 CCT6AP40227 531 aaKnown RBP21.25■□□□□ 0.99
SSC4D-201ENST00000275560 TJP1Q07157 1748 aa21.25■□□□□ 0.99
SSC4D-201ENST00000275560 RNF225M0QZC1 329 aaPredicted RBP21.24■□□□□ 0.99
SSC4D-201ENST00000275560 PLCD1P51178 756 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 CWC15Q9P013 229 aaKnown RBP21.24■□□□□ 0.99
SSC4D-201ENST00000275560 HOOK1Q9UJC3 728 aaKnown RBP21.24■□□□□ 0.99
SSC4D-201ENST00000275560 MYH8P13535 1937 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 RRP12Q5JTH9 1297 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms