RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 PTPDC1A2A3K4 754 aa17.04■□□□□ 0.32
TRIM23-202ENST00000274327 CRKP46108 304 aa17.04■□□□□ 0.32
TRIM23-202ENST00000274327 SCNN1DP51172 638 aa17.04■□□□□ 0.32
TRIM23-202ENST00000274327 PDE4BQ07343 736 aa17.04■□□□□ 0.32
TRIM23-202ENST00000274327 WTAPQ15007 396 aa17.04■□□□□ 0.32
TRIM23-202ENST00000274327 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
TRIM23-202ENST00000274327 PRDM1O75626 825 aa17.03■□□□□ 0.32
TRIM23-202ENST00000274327 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
TRIM23-202ENST00000274327 APOBEC3HQ6NTF7 200 aaKnown RBP17.03■□□□□ 0.32
TRIM23-202ENST00000274327 AMOTL1Q8IY63 956 aa17.03■□□□□ 0.32
TRIM23-202ENST00000274327 TMTC2Q8N394 836 aa17.03■□□□□ 0.32
TRIM23-202ENST00000274327 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
TRIM23-202ENST00000274327 ZDHHC15Q96MV8 337 aa17.03■□□□□ 0.32
TRIM23-202ENST00000274327 ZKSCAN3Q9BRR0 538 aa17.03■□□□□ 0.32
TRIM23-202ENST00000274327 ZNF277Q9NRM2 450 aaPredicted RBP17.03■□□□□ 0.32
TRIM23-202ENST00000274327 ERICH2A1L162 156 aa17.03■□□□□ 0.32
TRIM23-202ENST00000274327 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
TRIM23-202ENST00000274327 F13A1P00488 732 aa17.03■□□□□ 0.32
TRIM23-202ENST00000274327 NFXL1Q6ZNB6 911 aa17.03■□□□□ 0.32
TRIM23-202ENST00000274327 UBAC1Q9BSL1 405 aa17.03■□□□□ 0.32
TRIM23-202ENST00000274327 TNKSO95271 1327 aa17.02■□□□□ 0.32
TRIM23-202ENST00000274327 CCDC69A6NI79 296 aa17.02■□□□□ 0.31
TRIM23-202ENST00000274327 ZBTB43O43298 467 aa17.02■□□□□ 0.31
TRIM23-202ENST00000274327 RANBP6O60518 1105 aaKnown RBP17.02■□□□□ 0.31
TRIM23-202ENST00000274327 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.31
TRIM23-202ENST00000274327 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.31
TRIM23-202ENST00000274327 PLCD1P51178 756 aa17.02■□□□□ 0.31
TRIM23-202ENST00000274327 RCAN1P53805 252 aa17.02■□□□□ 0.31
TRIM23-202ENST00000274327 CDC42EP5Q6NZY7 148 aa17.02■□□□□ 0.31
TRIM23-202ENST00000274327 RAB11FIP4Q86YS3 637 aa17.02■□□□□ 0.31
TRIM23-202ENST00000274327 KIAA0825Q8IV33 1275 aa17.02■□□□□ 0.31
TRIM23-202ENST00000274327 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.31
TRIM23-202ENST00000274327 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.31
TRIM23-202ENST00000274327 SAP30BPQ9UHR5 308 aaKnown RBP17.02■□□□□ 0.31
TRIM23-202ENST00000274327 WDHD1O75717 1129 aaPredicted RBP17.01■□□□□ 0.31
TRIM23-202ENST00000274327 PTMSP20962 102 aa17.01■□□□□ 0.31
TRIM23-202ENST00000274327 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
TRIM23-202ENST00000274327 DYNLL2Q96FJ2 89 aa17.01■□□□□ 0.31
TRIM23-202ENST00000274327 USP40Q9NVE5 1235 aa17.01■□□□□ 0.31
TRIM23-202ENST00000274327 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
TRIM23-202ENST00000274327 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
TRIM23-202ENST00000274327 TCHHQ07283 1943 aa17.01■□□□□ 0.31
TRIM23-202ENST00000274327 ARFGEF1Q9Y6D6 1849 aa17.01■□□□□ 0.31
TRIM23-202ENST00000274327 FDPSP14324 419 aaKnown RBP17■□□□□ 0.31
TRIM23-202ENST00000274327 IARSP41252 1262 aaKnown RBP17■□□□□ 0.31
TRIM23-202ENST00000274327 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
TRIM23-202ENST00000274327 IQCA1Q86XH1 822 aa17■□□□□ 0.31
TRIM23-202ENST00000274327 ENAHQ8N8S7 591 aaPredicted RBP17■□□□□ 0.31
TRIM23-202ENST00000274327 FAM184AQ8NB25 1140 aa17■□□□□ 0.31
TRIM23-202ENST00000274327 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
TRIM23-202ENST00000274327 FAM217BQ9NTX9 383 aaPredicted RBP17■□□□□ 0.31
TRIM23-202ENST00000274327 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
TRIM23-202ENST00000274327 GOLGA8AA7E2F4 631 aa17■□□□□ 0.31
TRIM23-202ENST00000274327 GOLGA6L22H0YM25 854 aa17■□□□□ 0.31
TRIM23-202ENST00000274327 VIL1P09327 827 aaKnown RBP17■□□□□ 0.31
TRIM23-202ENST00000274327 CDC27P30260 824 aa17■□□□□ 0.31
TRIM23-202ENST00000274327 RSBN1LQ6PCB5 846 aaPredicted RBP17■□□□□ 0.31
TRIM23-202ENST00000274327 C16orf86Q6ZW13 317 aa17■□□□□ 0.31
TRIM23-202ENST00000274327 KIF3AQ9Y496 699 aa17■□□□□ 0.31
TRIM23-202ENST00000274327 VPS37CA5D8V6 355 aaPredicted RBP16.99■□□□□ 0.31
TRIM23-202ENST00000274327 FAM47AQ5JRC9 791 aa16.99■□□□□ 0.31
TRIM23-202ENST00000274327 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
TRIM23-202ENST00000274327 SYNE3Q6ZMZ3 975 aa16.99■□□□□ 0.31
TRIM23-202ENST00000274327 CDC37L1Q7L3B6 337 aa16.99■□□□□ 0.31
TRIM23-202ENST00000274327 MICU3Q86XE3 530 aa16.99■□□□□ 0.31
TRIM23-202ENST00000274327 ZNF654Q8IZM8 581 aa16.99■□□□□ 0.31
TRIM23-202ENST00000274327 PPP1R1BQ9UD71 204 aaPredicted RBP16.99■□□□□ 0.31
TRIM23-202ENST00000274327 CPLX1O14810 134 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 RXRAP19793 462 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 ADD1P35611 737 aaKnown RBP16.98■□□□□ 0.31
TRIM23-202ENST00000274327 NTRK3Q16288 839 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 CHAMP1Q96JM3 812 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 GMLQ99445 158 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 MYL10Q9BUA6 226 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 TAOK3Q9H2K8 898 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 ZNRF3Q9ULT6 936 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 PCDHAC2Q9Y5I4 1007 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 NFKBIEO00221 500 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 PSMD14O00487 310 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 RASA1P20936 1047 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 CDK8P49336 464 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 OSBPL5Q9H0X9 879 aaPredicted RBP16.98■□□□□ 0.31
TRIM23-202ENST00000274327 MKNK2Q9HBH9 465 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 ZNF287Q9HBT7 754 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 TCP11L1Q9NUJ3 509 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 ATP6V1DQ9Y5K8 247 aa16.98■□□□□ 0.31
TRIM23-202ENST00000274327 TSPY2A6NKD2 308 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
TRIM23-202ENST00000274327 CDKL5O76039 1030 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 TFAP4Q01664 338 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 PICALMQ13492 652 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 IFIT1BQ5T764 474 aaKnown RBP16.97■□□□□ 0.31
TRIM23-202ENST00000274327 KLHL34Q8N239 644 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 SLC44A5Q8NCS7 719 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 ANKS1AQ92625 1134 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 IDI2Q9BXS1 227 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 LMBRD1Q9NUN5 540 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 MYH8P13535 1937 aa16.97■□□□□ 0.31
TRIM23-202ENST00000274327 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms