RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RFX7Q2KHR2 1363 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 PPP6R2O75170 966 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 TATP17735 454 aaPredicted RBP14.73□□□□□ -0.05
COL8A1-202ENST00000273342 CASP14P31944 242 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 CTDSPL2Q05D32 466 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 TMEM67Q5HYA8 995 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 SRGAP1Q7Z6B7 1085 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 SLC35F6Q8N357 371 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 KAT6BQ8WYB5 2073 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 H7C1W4 665 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 VSNL1P62760 191 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 FCHSD1Q86WN1 690 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 IPO4Q8TEX9 1081 aaKnown RBP14.73□□□□□ -0.05
COL8A1-202ENST00000273342 RABEP2Q9H5N1 569 aa14.73□□□□□ -0.05
COL8A1-202ENST00000273342 ZMYM6O95789 1325 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 UBN2Q6ZU65 1347 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 CCDC151A5D8V7 595 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 ATP8B1O43520 1251 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 ACTN2P35609 894 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 NCAPH2Q6IBW4 605 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 DIS3L2Q8IYB7 885 aaKnown RBP14.72□□□□□ -0.05
COL8A1-202ENST00000273342 APPBP2Q92624 585 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 TFR2Q9UP52 801 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 ADGRG1Q9Y653 693 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 MYH15Q9Y2K3 1946 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 GOLGA6L9A6NEM1 432 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 ZMYND10O75800 440 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 BEND6Q5SZJ8 279 aaPredicted RBP14.72□□□□□ -0.05
COL8A1-202ENST00000273342 NUP133Q8WUM0 1156 aa14.72□□□□□ -0.05
COL8A1-202ENST00000273342 CWC15Q9P013 229 aaKnown RBP14.72□□□□□ -0.05
COL8A1-202ENST00000273342 FAM205CA6NFA0 338 aa14.71□□□□□ -0.05
COL8A1-202ENST00000273342 CYP27B1O15528 508 aa14.71□□□□□ -0.05
COL8A1-202ENST00000273342 TOB1P50616 345 aaPredicted RBP14.71□□□□□ -0.05
COL8A1-202ENST00000273342 MDM2Q00987 491 aaPredicted RBP14.71□□□□□ -0.05
COL8A1-202ENST00000273342 AKAP17AQ02040 695 aaKnown RBP14.71□□□□□ -0.05
COL8A1-202ENST00000273342 MUM1L1Q5H9M0 696 aa14.71□□□□□ -0.05
COL8A1-202ENST00000273342 NOA1Q8NC60 698 aaKnown RBP14.71□□□□□ -0.05
COL8A1-202ENST00000273342 GOLGA5Q8TBA6 731 aa14.71□□□□□ -0.05
COL8A1-202ENST00000273342 OXER1Q8TDS5 423 aa14.71□□□□□ -0.05
COL8A1-202ENST00000273342 MRC1P22897 1456 aa14.71□□□□□ -0.05
COL8A1-202ENST00000273342 KDM6AO15550 1401 aaPredicted RBP14.71□□□□□ -0.05
COL8A1-202ENST00000273342 ENC1O14682 589 aa14.71□□□□□ -0.05
COL8A1-202ENST00000273342 IFIT3O14879 490 aaKnown RBP14.71□□□□□ -0.05
COL8A1-202ENST00000273342 SRLQ86TD4 932 aa14.71□□□□□ -0.05
COL8A1-202ENST00000273342 NUTM2AQ8IVF1 878 aaPredicted RBP14.71□□□□□ -0.05
COL8A1-202ENST00000273342 EXOC4Q96A65 974 aa14.71□□□□□ -0.05
COL8A1-202ENST00000273342 MARF1Q9Y4F3 1742 aaKnown RBP14.71□□□□□ -0.06
COL8A1-202ENST00000273342 ZNF18P17022 549 aa14.71□□□□□ -0.06
COL8A1-202ENST00000273342 NOSTRINQ8IVI9 506 aa14.71□□□□□ -0.06
COL8A1-202ENST00000273342 IFNL2Q8IZJ0 200 aa14.71□□□□□ -0.06
COL8A1-202ENST00000273342 EPSTI1Q96J88 318 aa14.71□□□□□ -0.06
COL8A1-202ENST00000273342 CABP5Q9NP86 173 aa14.71□□□□□ -0.06
COL8A1-202ENST00000273342 TRIM10Q9UDY6 481 aa14.71□□□□□ -0.06
COL8A1-202ENST00000273342 HOOK1Q9UJC3 728 aaKnown RBP14.71□□□□□ -0.06
COL8A1-202ENST00000273342 MAPK8IP1Q9UQF2 711 aa14.71□□□□□ -0.06
COL8A1-202ENST00000273342 PES1O00541 588 aaKnown RBP14.7□□□□□ -0.06
COL8A1-202ENST00000273342 SH2B2O14492 632 aaPredicted RBP14.7□□□□□ -0.06
COL8A1-202ENST00000273342 CD44P16070 742 aaKnown RBP14.7□□□□□ -0.06
COL8A1-202ENST00000273342 FXR1P51114 621 aaKnown RBP eCLIP14.7□□□□□ -0.06
COL8A1-202ENST00000273342 SSRP1Q08945 709 aaKnown RBP14.7□□□□□ -0.06
COL8A1-202ENST00000273342 HDXQ7Z353 690 aa14.7□□□□□ -0.06
COL8A1-202ENST00000273342 CDC23Q9UJX2 597 aa14.7□□□□□ -0.06
COL8A1-202ENST00000273342 SLC12A7Q9Y666 1083 aa14.7□□□□□ -0.06
COL8A1-202ENST00000273342 CDKL5O76039 1030 aa14.7□□□□□ -0.06
COL8A1-202ENST00000273342 NR1I3Q14994 352 aa14.7□□□□□ -0.06
COL8A1-202ENST00000273342 HELBQ8NG08 1087 aaPredicted RBP14.7□□□□□ -0.06
COL8A1-202ENST00000273342 RIN2Q8WYP3 895 aaPredicted RBP14.7□□□□□ -0.06
COL8A1-202ENST00000273342 SLF1Q9BQI6 1058 aa14.7□□□□□ -0.06
COL8A1-202ENST00000273342 CSRNP2Q9H175 543 aa14.7□□□□□ -0.06
COL8A1-202ENST00000273342 VPS16Q9H269 839 aa14.7□□□□□ -0.06
COL8A1-202ENST00000273342 SNAP23O00161 211 aa14.69□□□□□ -0.06
COL8A1-202ENST00000273342 MAP2K7O14733 419 aa14.69□□□□□ -0.06
COL8A1-202ENST00000273342 MCAMP43121 646 aa14.69□□□□□ -0.06
COL8A1-202ENST00000273342 HSP90B2PQ58FF3 399 aa14.69□□□□□ -0.06
COL8A1-202ENST00000273342 FAM217BQ9NTX9 383 aaPredicted RBP14.69□□□□□ -0.06
COL8A1-202ENST00000273342 NFAT5O94916 1531 aa14.69□□□□□ -0.06
COL8A1-202ENST00000273342 CTAGE9A4FU28 777 aa14.69□□□□□ -0.06
COL8A1-202ENST00000273342 CASP8Q14790 479 aa14.69□□□□□ -0.06
COL8A1-202ENST00000273342 BRD3Q15059 726 aa14.69□□□□□ -0.06
COL8A1-202ENST00000273342 SAFBQ15424 915 aaKnown RBP eCLIP14.69□□□□□ -0.06
COL8A1-202ENST00000273342 ENOX1Q8TC92 643 aaKnown RBP14.69□□□□□ -0.06
COL8A1-202ENST00000273342 TSPYL1Q9H0U9 437 aa14.69□□□□□ -0.06
COL8A1-202ENST00000273342 RNF225M0QZC1 329 aaPredicted RBP14.68□□□□□ -0.06
COL8A1-202ENST00000273342 NTRK3Q16288 839 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 METTL24Q5JXM2 366 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 MLKLQ8NB16 471 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 EEF2KMTQ96G04 330 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 CAPZA3Q96KX2 299 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 BLZF1Q9H2G9 400 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 STRN4Q9NRL3 753 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 ZSWIM5Q9P217 1185 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 HDAC6Q9UBN7 1215 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 GUCA1BQ9UMX6 200 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 LRRIQ3A6PVS8 624 aaPredicted RBP14.68□□□□□ -0.06
COL8A1-202ENST00000273342 GPTP24298 496 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 SLC20A2Q08357 652 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 MORC3Q14149 939 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 FBXO2Q9UK22 296 aaPredicted RBP14.68□□□□□ -0.06
COL8A1-202ENST00000273342 L1RE1Q9UN81 338 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 AKAP2Q9Y2D5 859 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms