RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 HSH2DQ96JZ2 352 aa12.91□□□□□ -0.34
LRTM1-201ENST00000273286 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
LRTM1-201ENST00000273286 H0YIN7 160 aa12.9□□□□□ -0.34
LRTM1-201ENST00000273286 C21orf2O43822 256 aa12.9□□□□□ -0.34
LRTM1-201ENST00000273286 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
LRTM1-201ENST00000273286 IL6STP40189 918 aaPredicted RBP12.9□□□□□ -0.34
LRTM1-201ENST00000273286 DGKGP49619 791 aa12.9□□□□□ -0.34
LRTM1-201ENST00000273286 TTLL6Q8N841 843 aa12.9□□□□□ -0.34
LRTM1-201ENST00000273286 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
LRTM1-201ENST00000273286 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
LRTM1-201ENST00000273286 HEG1Q9ULI3 1381 aa12.9□□□□□ -0.34
LRTM1-201ENST00000273286 TNRC6CQ9HCJ0 1690 aaKnown RBP12.9□□□□□ -0.34
LRTM1-201ENST00000273286 DLEC1Q9Y238 1755 aa12.9□□□□□ -0.34
LRTM1-201ENST00000273286 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.35
LRTM1-201ENST00000273286 COL8A1P27658 744 aa12.89□□□□□ -0.35
LRTM1-201ENST00000273286 GRIN2CQ14957 1233 aa12.89□□□□□ -0.35
LRTM1-201ENST00000273286 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
LRTM1-201ENST00000273286 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 GNB5O14775 395 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 ITGB2P05107 769 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 LMNB1P20700 586 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 PDE6BP35913 854 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
LRTM1-201ENST00000273286 CRTC2Q53ET0 693 aaPredicted RBP12.88□□□□□ -0.35
LRTM1-201ENST00000273286 IL17REQ8NFR9 667 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 SCG3Q8WXD2 468 aaKnown RBP12.88□□□□□ -0.35
LRTM1-201ENST00000273286 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
LRTM1-201ENST00000273286 SUV39H2Q9H5I1 410 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 SBF1O95248 1867 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 PIK3R2O00459 728 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 MSTNO14793 375 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 SFSWAPQ12872 951 aaKnown RBP12.88□□□□□ -0.35
LRTM1-201ENST00000273286 BRIP1Q9BX63 1249 aa12.88□□□□□ -0.35
LRTM1-201ENST00000273286 SIPA1L3O60292 1781 aaPredicted RBP12.87□□□□□ -0.35
LRTM1-201ENST00000273286 LMOD1P29536 600 aaPredicted RBP12.87□□□□□ -0.35
LRTM1-201ENST00000273286 PTK7Q13308 1070 aa12.87□□□□□ -0.35
LRTM1-201ENST00000273286 SYT9Q86SS6 491 aa12.87□□□□□ -0.35
LRTM1-201ENST00000273286 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
LRTM1-201ENST00000273286 SMC1BQ8NDV3 1235 aa12.87□□□□□ -0.35
LRTM1-201ENST00000273286 ANKIB1Q9P2G1 1089 aa12.87□□□□□ -0.35
LRTM1-201ENST00000273286 SCN7AQ01118 1682 aa12.87□□□□□ -0.35
LRTM1-201ENST00000273286 BTBD11A6QL63 1104 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L15C9J2P7 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L13C9JLJ4 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L11C9JVI0 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L21D6R901 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L18D6R9N7 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L22D6RA61 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L17D6RBQ6 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L19D6RCP7 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L20D6RJB6 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 USP17L24Q0WX57 530 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 DPYDQ12882 1025 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 ALYREFQ86V81 257 aaKnown RBP12.86□□□□□ -0.35
LRTM1-201ENST00000273286 RTF1Q92541 710 aaKnown RBP12.86□□□□□ -0.35
LRTM1-201ENST00000273286 CEP63Q96MT8 703 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 SPOCK3Q9BQ16 436 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 BRD7Q9NPI1 651 aa12.86□□□□□ -0.35
LRTM1-201ENST00000273286 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 KRBA1A5PL33 1030 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 GLTPD2A6NH11 291 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 NPHP1O15259 732 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 VEGFAP15692 232 aaPredicted RBP12.85□□□□□ -0.35
LRTM1-201ENST00000273286 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 ALDH16A1Q8IZ83 802 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 DNAJC5GQ8N7S2 189 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 ZNF280CQ8ND82 737 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 SUSD3Q96L08 255 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 SETDB2Q96T68 719 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 SLC30A3Q99726 388 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 HINFPQ9BQA5 517 aa12.85□□□□□ -0.35
LRTM1-201ENST00000273286 C2orf49Q9BVC5 232 aaPredicted RBP12.85□□□□□ -0.35
LRTM1-201ENST00000273286 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
LRTM1-201ENST00000273286 LGR5O75473 907 aa12.84□□□□□ -0.35
LRTM1-201ENST00000273286 SOGA3Q5TF21 947 aa12.84□□□□□ -0.35
LRTM1-201ENST00000273286 TBC1D9BQ66K14 1250 aa12.84□□□□□ -0.35
LRTM1-201ENST00000273286 CLEC4GQ6UXB4 293 aa12.84□□□□□ -0.35
LRTM1-201ENST00000273286 STAG2Q8N3U4 1231 aa12.84□□□□□ -0.35
LRTM1-201ENST00000273286 CNBD1Q8NA66 436 aa12.84□□□□□ -0.35
LRTM1-201ENST00000273286 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
LRTM1-201ENST00000273286 FAM196BA6NMK8 535 aa12.83□□□□□ -0.36
LRTM1-201ENST00000273286 ST5P78524 1137 aa12.83□□□□□ -0.36
LRTM1-201ENST00000273286 TYRO3Q06418 890 aa12.83□□□□□ -0.36
LRTM1-201ENST00000273286 PRR5LQ6MZQ0 368 aa12.83□□□□□ -0.36
LRTM1-201ENST00000273286 VRTNQ9H8Y1 702 aa12.83□□□□□ -0.36
LRTM1-201ENST00000273286 LTBP3Q9NS15 1303 aa12.83□□□□□ -0.36
LRTM1-201ENST00000273286 ELOA3CA0A087WX78 387 aaPredicted RBP12.82□□□□□ -0.36
LRTM1-201ENST00000273286 ELOA3DA6NLF2 546 aaPredicted RBP12.82□□□□□ -0.36
LRTM1-201ENST00000273286 NEFMP07197 916 aa12.82□□□□□ -0.36
LRTM1-201ENST00000273286 SNRPA1P09661 255 aaKnown RBP12.82□□□□□ -0.36
LRTM1-201ENST00000273286 SPEM2Q0P670 501 aa12.82□□□□□ -0.36
LRTM1-201ENST00000273286 ELOA3BQ3SY89 546 aa12.82□□□□□ -0.36
LRTM1-201ENST00000273286 ANKMY2Q8IV38 441 aa12.82□□□□□ -0.36
LRTM1-201ENST00000273286 ELOA3Q8NG57 546 aa12.82□□□□□ -0.36
LRTM1-201ENST00000273286 NFKBIEO00221 500 aa12.81□□□□□ -0.36
LRTM1-201ENST00000273286 CAMTA2O94983 1202 aa12.81□□□□□ -0.36
LRTM1-201ENST00000273286 PROCP04070 461 aa12.81□□□□□ -0.36
LRTM1-201ENST00000273286 U2AF1L5P0DN76 240 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms