RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 ARHGEF5Q12774 1597 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 MYO5CQ9NQX4 1742 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 SOS1Q07889 1333 aaPredicted RBP9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 CHUKO15111 745 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 RNASEH2AO75792 299 aaKnown RBP9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 AIMP1Q12904 312 aaKnown RBP9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 NOC3LQ8WTT2 800 aaKnown RBP9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 FANCFQ9NPI8 374 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 LMCD1Q9NZU5 365 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 PCSK1NQ9UHG2 260 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 ASXL2Q76L83 1435 aa9.98□□□□□ -0.81
CTDSPL-201ENST00000273179 RASA4BC9J798 803 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 CPLX1O14810 134 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 CETN1Q12798 172 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 GRAMD4Q6IC98 578 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 FAM47EQ6ZV65 393 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 PPP1R14CQ8TAE6 165 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 TSR2Q969E8 191 aaKnown RBP9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 THUMPD2Q9BTF0 503 aaKnown RBP9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 IER2Q9BTL4 223 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 NDEL1Q9GZM8 345 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 BRD8Q9H0E9 1235 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 WDR37Q9Y2I8 494 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 TMEM98Q9Y2Y6 226 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 ANKRD33BA6NCL7 494 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 LIG3P49916 1009 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 POSTNQ15063 836 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 CCDC57Q2TAC2 916 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 NYAP1Q6ZVC0 841 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 KIAA1958Q8N8K9 716 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 CABS1Q96KC9 395 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 ASAP1Q9ULH1 1129 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 FANCAO15360 1455 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 STAMBPO95630 424 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 SCNN1BP51168 640 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 LBRQ14739 615 aaKnown RBP9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 ZNF365Q70YC5 407 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 C2orf49Q9BVC5 232 aaPredicted RBP9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 ABCF3Q9NUQ8 709 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 CGNL1Q0VF96 1302 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 CSE1LP55060 971 aaKnown RBP9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 CEP78Q5JTW2 689 aa9.97□□□□□ -0.81
CTDSPL-201ENST00000273179 CCDC85CA6NKD9 419 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 NDC80O14777 642 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 DNAJC8O75937 253 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 HSPA8P11142 646 aaKnown RBP9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 EIF4BP23588 611 aaKnown RBP9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 DYNC1I2Q13409 638 aaKnown RBP9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 ARHGEF6Q15052 776 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 CEP85LQ5SZL2 805 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 GOLGA1Q92805 767 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 TTC14Q96N46 770 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 BZW2Q9Y6E2 419 aaKnown RBP9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 CNGA3Q16281 694 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 TPD52L1Q16890 204 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 ATF7IPQ6VMQ6 1270 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 LRRC43Q8N309 656 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 SELENOSQ9BQE4 189 aa9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 PAPOLBQ9NRJ5 636 aaKnown RBP9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 DHX29Q7Z478 1369 aaKnown RBP9.96□□□□□ -0.81
CTDSPL-201ENST00000273179 ITGB3BPQ13352 177 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL-201ENST00000273179 HLTFQ14527 1009 aaKnown RBP eCLIP9.96□□□□□ -0.821e-6■■■□□ 17.7
CTDSPL-201ENST00000273179 DIXDC1Q155Q3 683 aa9.96□□□□□ -0.82
CTDSPL-201ENST00000273179 CEP295NLQ96MC4 621 aa9.96□□□□□ -0.82
CTDSPL-201ENST00000273179 FBXO2Q9UK22 296 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL-201ENST00000273179 USTQ9Y2C2 406 aa9.96□□□□□ -0.82
CTDSPL-201ENST00000273179 IQCA1LA6NCM1 817 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 ATP2B2Q01814 1243 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 CCT7Q99832 543 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 MCM8Q9UJA3 840 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 TSC22D4Q9Y3Q8 395 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 WDR7Q9Y4E6 1490 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 TARSL2A2RTX5 802 aaKnown RBP9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 SNX2O60749 519 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 GALNT6Q8NCL4 622 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 CEP70Q8NHQ1 597 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 ERMNQ8TAM6 284 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 KCNB2Q92953 911 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 EXOC4Q96A65 974 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 SPECC1L-ADORA2AF8WAN1 911 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 TADA3O75528 432 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 DDHD2O94830 711 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 IDEP14735 1019 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 RRP1P56182 461 aaKnown RBP9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 PPP4CP60510 307 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 PSME1Q06323 249 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 TBC1D8BQ0IIM8 1120 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 TBC1D25Q3MII6 688 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 ARL6IP6Q8N6S5 226 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 CCDC148Q8NFR7 591 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 AP1M1Q9BXS5 423 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 TRIM5Q9C035 493 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 CNNM2Q9H8M5 875 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 DCAF16Q9NXF7 216 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 DMGDHQ9UI17 866 aaKnown RBP9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 A2MP01023 1474 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 EIF3FO00303 357 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms