RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 BCS1LQ9Y276 419 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 CD2APQ9Y5K6 639 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 RANBP6O60518 1105 aaKnown RBP14.69□□□□□ -0.06
CAPN9-201ENST00000271971 RAD17O75943 681 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 BRD1O95696 1058 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 TPM2P07951 284 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 PLCG2P16885 1265 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 SYT1P21579 422 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 CRKP46108 304 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 EVCP57679 992 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 PICALMQ13492 652 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 GRIPAP1Q4V328 841 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 TEKT1Q969V4 418 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 DDX11Q96FC9 970 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 ZNF274Q96GC6 653 aaPredicted RBP14.69□□□□□ -0.06
CAPN9-201ENST00000271971 MYL10Q9BUA6 226 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 TCHHQ07283 1943 aa14.69□□□□□ -0.06
CAPN9-201ENST00000271971 CTDNEP1O95476 244 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 PLCD1P51178 756 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 SKOR2Q2VWA4 1001 aaPredicted RBP14.68□□□□□ -0.06
CAPN9-201ENST00000271971 C12orf60Q5U649 245 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 ESR2Q92731 530 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 TMEM87BQ96K49 555 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.68□□□□□ -0.06
CAPN9-201ENST00000271971 SOGA3Q5TF21 947 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 APOBEC3HQ6NTF7 200 aaKnown RBP14.68□□□□□ -0.06
CAPN9-201ENST00000271971 NFXL1Q6ZNB6 911 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 MICU3Q86XE3 530 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 CCDC144CPQ8IYA2 1237 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 SLC44A5Q8NCS7 719 aa14.68□□□□□ -0.06
CAPN9-201ENST00000271971 NSUN7Q8NE18 718 aaKnown RBP14.68□□□□□ -0.06
CAPN9-201ENST00000271971 MYH8P13535 1937 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 ARFGEF1Q9Y6D6 1849 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 POLR3DP05423 398 aaPredicted RBP14.67□□□□□ -0.06
CAPN9-201ENST00000271971 FAM47AQ5JRC9 791 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 CERS3Q8IU89 383 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 DDX4Q9NQI0 724 aaKnown RBP14.67□□□□□ -0.06
CAPN9-201ENST00000271971 PTPDC1A2A3K4 754 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 NFKBIEO00221 500 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 STX6O43752 255 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 WDHD1O75717 1129 aaPredicted RBP14.67□□□□□ -0.06
CAPN9-201ENST00000271971 FGRP09769 529 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 IARSP41252 1262 aaKnown RBP14.67□□□□□ -0.06
CAPN9-201ENST00000271971 RBM5P52756 815 aaKnown RBP eCLIP14.67□□□□□ -0.06
CAPN9-201ENST00000271971 FKBP1AP62942 108 aaKnown RBP14.67□□□□□ -0.06
CAPN9-201ENST00000271971 FOXD4L6Q3SYB3 417 aaPredicted RBP14.67□□□□□ -0.06
CAPN9-201ENST00000271971 CDC42EP5Q6NZY7 148 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 APOA5Q6Q788 366 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 HHIPL2Q6UWX4 724 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 FOXD4L3Q6VB84 417 aaPredicted RBP14.67□□□□□ -0.06
CAPN9-201ENST00000271971 UBAC1Q9BSL1 405 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 TAOK3Q9H2K8 898 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 USP40Q9NVE5 1235 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 TNKSO95271 1327 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 ROBO3Q96MS0 1386 aa14.67□□□□□ -0.06
CAPN9-201ENST00000271971 PSMD14O00487 310 aa14.66□□□□□ -0.06
CAPN9-201ENST00000271971 NMT2O60551 498 aa14.66□□□□□ -0.06
CAPN9-201ENST00000271971 CACNB3P54284 484 aa14.66□□□□□ -0.06
CAPN9-201ENST00000271971 VPS37CA5D8V6 355 aaPredicted RBP14.66□□□□□ -0.06
CAPN9-201ENST00000271971 ORC4O43929 436 aa14.66□□□□□ -0.06
CAPN9-201ENST00000271971 BAG4O95429 457 aaKnown RBP14.66□□□□□ -0.06
CAPN9-201ENST00000271971 SLC3A2P08195 630 aaKnown RBP14.66□□□□□ -0.06
CAPN9-201ENST00000271971 NFIAQ12857 509 aa14.66□□□□□ -0.06
CAPN9-201ENST00000271971 WTAPQ15007 396 aa14.66□□□□□ -0.06
CAPN9-201ENST00000271971 SART3Q15020 963 aaKnown RBP14.66□□□□□ -0.06
CAPN9-201ENST00000271971 AMOTL1Q8IY63 956 aa14.66□□□□□ -0.06
CAPN9-201ENST00000271971 GBP4Q96PP9 640 aa14.66□□□□□ -0.06
CAPN9-201ENST00000271971 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
CAPN9-201ENST00000271971 LIFRP42702 1097 aa14.65□□□□□ -0.06
CAPN9-201ENST00000271971 FOSBP53539 338 aa14.65□□□□□ -0.06
CAPN9-201ENST00000271971 RASSF7Q02833 373 aa14.65□□□□□ -0.06
CAPN9-201ENST00000271971 PDE4BQ07343 736 aa14.65□□□□□ -0.06
CAPN9-201ENST00000271971 SGMS1Q86VZ5 419 aa14.65□□□□□ -0.06
CAPN9-201ENST00000271971 NIM1KQ8IY84 436 aa14.65□□□□□ -0.06
CAPN9-201ENST00000271971 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
CAPN9-201ENST00000271971 SMARCC2Q8TAQ2 1214 aa14.65□□□□□ -0.06
CAPN9-201ENST00000271971 ZDHHC15Q96MV8 337 aa14.65□□□□□ -0.06
CAPN9-201ENST00000271971 WDR33Q9C0J8 1336 aaKnown RBP14.65□□□□□ -0.06
CAPN9-201ENST00000271971 ERICH2A1L162 156 aa14.65□□□□□ -0.07
CAPN9-201ENST00000271971 CCDC69A6NI79 296 aa14.65□□□□□ -0.07
CAPN9-201ENST00000271971 PCP11498 1178 aaKnown RBP14.65□□□□□ -0.07
CAPN9-201ENST00000271971 METAP2P50579 478 aaKnown RBP eCLIP14.65□□□□□ -0.07
CAPN9-201ENST00000271971 SEC23AQ15436 765 aa14.65□□□□□ -0.07
CAPN9-201ENST00000271971 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.07
CAPN9-201ENST00000271971 ZSCAN10Q96SZ4 725 aaPredicted RBP14.65□□□□□ -0.07
CAPN9-201ENST00000271971 MTMR6Q9Y217 621 aa14.65□□□□□ -0.07
CAPN9-201ENST00000271971 ZBTB43O43298 467 aa14.64□□□□□ -0.07
CAPN9-201ENST00000271971 ZSCAN22P10073 491 aaPredicted RBP14.64□□□□□ -0.07
CAPN9-201ENST00000271971 RSBN1LQ6PCB5 846 aaPredicted RBP14.64□□□□□ -0.07
CAPN9-201ENST00000271971 ILDR2Q71H61 639 aa14.64□□□□□ -0.07
CAPN9-201ENST00000271971 CDC37L1Q7L3B6 337 aa14.64□□□□□ -0.07
CAPN9-201ENST00000271971 LLPHQ9BRT6 129 aaKnown RBP14.64□□□□□ -0.07
CAPN9-201ENST00000271971 SLC12A7Q9Y666 1083 aa14.64□□□□□ -0.07
CAPN9-201ENST00000271971 SIPA1L1O43166 1804 aa14.63□□□□□ -0.07
CAPN9-201ENST00000271971 TSPY2A6NKD2 308 aa14.63□□□□□ -0.07
CAPN9-201ENST00000271971 CDC27P30260 824 aa14.63□□□□□ -0.07
CAPN9-201ENST00000271971 ADD1P35611 737 aaKnown RBP14.63□□□□□ -0.07
CAPN9-201ENST00000271971 SPON1Q9HCB6 807 aa14.63□□□□□ -0.07
CAPN9-201ENST00000271971 ZNRF3Q9ULT6 936 aa14.63□□□□□ -0.07
CAPN9-201ENST00000271971 GOLGA8AA7E2F4 631 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms