RNA–Protein interactions for RNA: ENST00000269209.6

GAREM1-201, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAREM1, Length 3,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-201ENST00000269209 NARFQ9UHQ1 456 aa11.73□□□□□ -0.53
GAREM1-201ENST00000269209 WDR19Q8NEZ3 1342 aa11.73□□□□□ -0.53
GAREM1-201ENST00000269209 FAM205CA6NFA0 338 aa11.72□□□□□ -0.53
GAREM1-201ENST00000269209 PNOCQ13519 176 aa11.72□□□□□ -0.53
GAREM1-201ENST00000269209 SLC39A14Q15043 492 aa11.72□□□□□ -0.53
GAREM1-201ENST00000269209 SHC4Q6S5L8 630 aa11.72□□□□□ -0.53
GAREM1-201ENST00000269209 DHX40Q8IX18 779 aaKnown RBP11.72□□□□□ -0.53
GAREM1-201ENST00000269209 RNF41Q9H4P4 317 aaPredicted RBP11.72□□□□□ -0.53
GAREM1-201ENST00000269209 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
GAREM1-201ENST00000269209 PNPLA7Q6ZV29 1317 aa11.72□□□□□ -0.53
GAREM1-201ENST00000269209 PLEKHA8P1O95397 391 aa11.72□□□□□ -0.53
GAREM1-201ENST00000269209 AKAP17AQ02040 695 aaKnown RBP11.72□□□□□ -0.53
GAREM1-201ENST00000269209 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
GAREM1-201ENST00000269209 IFIT1BQ5T764 474 aaKnown RBP11.72□□□□□ -0.53
GAREM1-201ENST00000269209 FAM196AQ6ZSG2 479 aa11.72□□□□□ -0.53
GAREM1-201ENST00000269209 ENAHQ8N8S7 591 aaPredicted RBP11.72□□□□□ -0.53
GAREM1-201ENST00000269209 C16orf45Q96MC5 204 aaPredicted RBP11.72□□□□□ -0.53
GAREM1-201ENST00000269209 ZNF804BA4D1E1 1349 aa11.71□□□□□ -0.53
GAREM1-201ENST00000269209 FOXN1O15353 648 aa11.71□□□□□ -0.53
GAREM1-201ENST00000269209 RPS6KA4O75676 772 aa11.71□□□□□ -0.53
GAREM1-201ENST00000269209 SMC2O95347 1197 aa11.71□□□□□ -0.53
GAREM1-201ENST00000269209 LMOD1P29536 600 aaPredicted RBP11.71□□□□□ -0.53
GAREM1-201ENST00000269209 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.53
GAREM1-201ENST00000269209 NOSTRINQ8IVI9 506 aa11.71□□□□□ -0.53
GAREM1-201ENST00000269209 KIAA1524Q8TCG1 905 aa11.71□□□□□ -0.53
GAREM1-201ENST00000269209 V9GY48 417 aaPredicted RBP11.71□□□□□ -0.53
GAREM1-201ENST00000269209 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.54
GAREM1-201ENST00000269209 IFNAR1P17181 557 aa11.71□□□□□ -0.54
GAREM1-201ENST00000269209 CTR9Q6PD62 1173 aa11.71□□□□□ -0.54
GAREM1-201ENST00000269209 PLA2G4DQ86XP0 818 aa11.71□□□□□ -0.54
GAREM1-201ENST00000269209 DZIP1Q86YF9 867 aaKnown RBP11.71□□□□□ -0.54
GAREM1-201ENST00000269209 CACTINQ8WUQ7 758 aaKnown RBP11.71□□□□□ -0.54
GAREM1-201ENST00000269209 NSUN4Q96CB9 384 aaKnown RBP11.71□□□□□ -0.54
GAREM1-201ENST00000269209 PCDHB6Q9Y5E3 794 aa11.71□□□□□ -0.54
GAREM1-201ENST00000269209 A0A1W2PQ27 194 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 A0A1W2PQ64 194 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 A0A1W2PQD8 194 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 VPS72Q15906 364 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 CRACR2BQ8N4Y2 399 aaPredicted RBP11.7□□□□□ -0.54
GAREM1-201ENST00000269209 MCM9Q9NXL9 1143 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 IQCA1Q86XH1 822 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 UBE2Q2Q8WVN8 375 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 ZSCAN10Q96SZ4 725 aaPredicted RBP11.7□□□□□ -0.54
GAREM1-201ENST00000269209 BCL9LQ86UU0 1499 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 MMP1P03956 469 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 USP17L8P0C7I0 530 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 CMA1P23946 247 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 PTPAQ15257 358 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 NOM1Q5C9Z4 860 aaKnown RBP11.7□□□□□ -0.54
GAREM1-201ENST00000269209 GRAMD1CQ8IYS0 662 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 NYXQ9GZU5 481 aa11.7□□□□□ -0.54
GAREM1-201ENST00000269209 TOB1P50616 345 aaPredicted RBP11.69□□□□□ -0.54
GAREM1-201ENST00000269209 GRIK5Q16478 980 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 USP49Q70CQ1 688 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 ZNF592Q92610 1267 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 MAP3K14Q99558 947 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 NAT10Q9H0A0 1025 aaKnown RBP11.69□□□□□ -0.54
GAREM1-201ENST00000269209 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
GAREM1-201ENST00000269209 TSPY2A6NKD2 308 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 TPM2P07951 284 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 ATP1A3P13637 1013 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 U2AF2P26368 475 aaKnown RBP eCLIP11.69□□□□□ -0.54
GAREM1-201ENST00000269209 HSP90AA2PQ14568 343 aaPredicted RBP11.69□□□□□ -0.54
GAREM1-201ENST00000269209 ZNF827Q17R98 1081 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 CATIPQ7Z7H3 387 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 JMYQ8N9B5 988 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 DYNLL2Q96FJ2 89 aa11.69□□□□□ -0.54
GAREM1-201ENST00000269209 DCP1AQ9NPI6 582 aaPredicted RBP11.69□□□□□ -0.54
GAREM1-201ENST00000269209 TRMT1Q9NXH9 659 aaKnown RBP11.69□□□□□ -0.54
GAREM1-201ENST00000269209 COL22A1Q8NFW1 1626 aaPredicted RBP11.68□□□□□ -0.54
GAREM1-201ENST00000269209 DEXIO95424 95 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 VEGFAP15692 232 aaPredicted RBP11.68□□□□□ -0.54
GAREM1-201ENST00000269209 EARS2Q5JPH6 523 aaKnown RBP11.68□□□□□ -0.54
GAREM1-201ENST00000269209 FBXO33Q7Z6M2 555 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 IFNKQ9P0W0 207 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 KCNH3Q9ULD8 1083 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 BAZ2AQ9UIF9 1905 aaKnown RBP11.68□□□□□ -0.54
GAREM1-201ENST00000269209 RTL9Q8NET4 1388 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
GAREM1-201ENST00000269209 CCDC196A0A1B0GTZ2 297 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 POLR2DO15514 142 aaKnown RBP11.68□□□□□ -0.54
GAREM1-201ENST00000269209 CNBD1Q8NA66 436 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 SHISA4Q96DD7 197 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 LRRC4BQ9NT99 713 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 USP5P45974 858 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 SEC23AQ15436 765 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 SLC44A5Q8NCS7 719 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 WASF1Q92558 559 aa11.68□□□□□ -0.54
GAREM1-201ENST00000269209 SAP30BPQ9UHR5 308 aaKnown RBP11.68□□□□□ -0.54
GAREM1-201ENST00000269209 LRP5O75197 1615 aa11.67□□□□□ -0.54
GAREM1-201ENST00000269209 TMTC2Q8N394 836 aa11.67□□□□□ -0.54
GAREM1-201ENST00000269209 KRI1Q8N9T8 703 aaKnown RBP11.67□□□□□ -0.54
GAREM1-201ENST00000269209 CRNKL1Q9BZJ0 848 aaKnown RBP11.67□□□□□ -0.54
GAREM1-201ENST00000269209 LTBP4Q8N2S1 1624 aa11.67□□□□□ -0.54
GAREM1-201ENST00000269209 WNT7AO00755 349 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms