RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 BRAPQ7Z569 592 aa18.73■□□□□ 0.59
TSPAN3-201ENST00000267970 GPR161Q8N6U8 529 aaKnown RBP18.73■□□□□ 0.59
TSPAN3-201ENST00000267970 NLRC4Q9NPP4 1024 aa18.73■□□□□ 0.59
TSPAN3-201ENST00000267970 CTTNBP2NLQ9P2B4 639 aa18.73■□□□□ 0.59
TSPAN3-201ENST00000267970 SNX14Q9Y5W7 946 aa18.73■□□□□ 0.59
TSPAN3-201ENST00000267970 RILPQ96NA2 401 aa18.73■□□□□ 0.59
TSPAN3-201ENST00000267970 CABS1Q96KC9 395 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 IFT74Q96LB3 600 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 FAM207AQ9NSI2 230 aaPredicted RBP18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 NPHP3Q7Z494 1330 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 VPS41P49754 854 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 OGFOD1Q8N543 542 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 DACT3Q96B18 629 aaPredicted RBP18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 KRT15P19012 456 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 PRKG1Q13976 671 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 CCDC14Q49A88 953 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 SH2D4BQ5SQS7 431 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 PHACTR3Q96KR7 559 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 BUB1O43683 1085 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 FAM89AQ96GI7 184 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 VCX3BQ9H321 246 aa18.72■□□□□ 0.59
TSPAN3-201ENST00000267970 CCDC105Q8IYK2 499 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 AFG3L2Q9Y4W6 797 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 EPRSP07814 1512 aaKnown RBP18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 TAF5LO75529 589 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 ZNF202O95125 648 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 USH1CQ9Y6N9 552 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 PAK1Q13153 545 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 IFT20Q8IY31 132 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 VPS37BQ9H9H4 285 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 STX10O60499 249 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 LDHBP07195 334 aaKnown RBP18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 NUF2Q9BZD4 464 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 PTPN23Q9H3S7 1636 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 NCBP1Q09161 790 aaKnown RBP18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 TBC1D31Q96DN5 1066 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 NOX5Q96PH1 765 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 GRIN2BQ13224 1484 aa18.71■□□□□ 0.59
TSPAN3-201ENST00000267970 BAG2O95816 211 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 KRT19P08727 400 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 NELFBQ8WX92 580 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 DCTPP1Q9H773 170 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 CAPN7Q9Y6W3 813 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 NESP48681 1621 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 GOLGA8FQ08AF8 430 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 GOLGA8DPQ0D2H9 430 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 CCDC62Q6P9F0 684 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 GNA11P29992 359 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 GCKP35557 465 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 RABGAP1Q9Y3P9 1069 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 ABCB4P21439 1286 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 HDAC9Q9UKV0 1011 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 NCKAP5LQ9HCH0 1330 aa18.7■□□□□ 0.58
TSPAN3-201ENST00000267970 LCA5Q86VQ0 697 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 MYRIPQ8NFW9 859 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 MICAL1Q8TDZ2 1067 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 BCL2L12Q9HB09 334 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 EEF2KMTQ96G04 330 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 AATFQ9NY61 560 aaKnown RBP eCLIP18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 SWAP70Q9UH65 585 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 GAS8O95995 478 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 VAMP4O75379 141 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 KIAA1524Q8TCG1 905 aa18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 SUDS3Q9H7L9 328 aaPredicted RBP18.69■□□□□ 0.58
TSPAN3-201ENST00000267970 ATP5DP30049 168 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 RRAGAQ7L523 313 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 KIFAP3Q92845 792 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 TFCP2L1Q9NZI6 479 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 GCNT3O95395 438 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 NFE2L3Q9Y4A8 694 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 ADCY1Q08828 1119 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 ARHGAP45Q92619 1136 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 ACTN4O43707 911 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 RPL13P26373 211 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 PRXQ9BXM0 1461 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 IL16Q14005 1332 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 LIG3P49916 1009 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 GNGT1P63211 74 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 ERCC6LQ2NKX8 1250 aa18.68■□□□□ 0.58
TSPAN3-201ENST00000267970 TRPC3Q13507 836 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 KIF22Q14807 665 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 UBL4BQ8N7F7 174 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 NLRP12P59046 1061 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 KRT71Q3SY84 523 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 NXNQ6DKJ4 435 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 MYCT1Q8N699 235 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 DPH5Q9H2P9 285 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 TRIM35Q9UPQ4 493 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 SAT1P21673 171 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 MSANTD4Q8NCY6 345 aa18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 XPO4Q9C0E2 1151 aaKnown RBP18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 DDX41Q9UJV9 622 aaKnown RBP18.67■□□□□ 0.58
TSPAN3-201ENST00000267970 TTF2Q9UNY4 1162 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms