RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
TCTN3-201ENST00000265993 SPATA31A1Q5TZJ5 1347 aa12.54□□□□□ -0.4
TCTN3-201ENST00000265993 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
TCTN3-201ENST00000265993 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
TCTN3-201ENST00000265993 PPARAQ07869 468 aa12.54□□□□□ -0.4
TCTN3-201ENST00000265993 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
TCTN3-201ENST00000265993 GLIPR1L2Q4G1C9 344 aa12.54□□□□□ -0.4
TCTN3-201ENST00000265993 ARMCX5Q6P1M9 558 aa12.54□□□□□ -0.4
TCTN3-201ENST00000265993 USP49Q70CQ1 688 aa12.54□□□□□ -0.4
TCTN3-201ENST00000265993 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.54□□□□□ -0.4
TCTN3-201ENST00000265993 V9GYY5 206 aaPredicted RBP12.54□□□□□ -0.4
TCTN3-201ENST00000265993 MMP1P03956 469 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 IFNAR1P17181 557 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 BMP6P22004 513 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 ZNF384Q8TF68 577 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 STAG1Q8WVM7 1258 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 KRT23Q9C075 422 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 CNNM2Q9H8M5 875 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 KCNH3Q9ULD8 1083 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 PCDHA5Q9Y5H7 936 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 PPP6R2O75170 966 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 RESP18Q5W5W9 173 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 CEP135Q66GS9 1140 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 ZNF654Q8IZM8 581 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
TCTN3-201ENST00000265993 UBAC1Q9BSL1 405 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 TNKSO95271 1327 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 ERICH2A1L162 156 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 RBM6P78332 1123 aaKnown RBP12.53□□□□□ -0.4
TCTN3-201ENST00000265993 PDE4BQ07343 736 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 PARP10Q53GL7 1025 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 MAP7D2Q96T17 732 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 PRDM10Q9NQV6 1147 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 VPS54Q9P1Q0 977 aa12.53□□□□□ -0.4
TCTN3-201ENST00000265993 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 FANCCQ00597 558 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 SART3Q15020 963 aaKnown RBP12.52□□□□□ -0.41
TCTN3-201ENST00000265993 NOM1Q5C9Z4 860 aaKnown RBP12.52□□□□□ -0.41
TCTN3-201ENST00000265993 EARS2Q5JPH6 523 aaKnown RBP12.52□□□□□ -0.41
TCTN3-201ENST00000265993 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 TRIM22Q8IYM9 498 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 CRACR2BQ8N4Y2 399 aaPredicted RBP12.52□□□□□ -0.41
TCTN3-201ENST00000265993 JMYQ8N9B5 988 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 FANCBQ8NB91 859 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 PNPLA7Q6ZV29 1317 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 WNK3Q9BYP7 1800 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 POLR2DO15514 142 aaKnown RBP12.52□□□□□ -0.41
TCTN3-201ENST00000265993 NMT2O60551 498 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 NCBP1Q09161 790 aaKnown RBP12.52□□□□□ -0.41
TCTN3-201ENST00000265993 AK7Q96M32 723 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 CABP5Q9NP86 173 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 TUBE1Q9UJT0 475 aa12.52□□□□□ -0.41
TCTN3-201ENST00000265993 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 BCL9LQ86UU0 1499 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 TMEM232C9JQI7 657 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 WNT7AO00755 349 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 CTIFO43310 598 aaKnown RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 GTF2E1P29083 439 aaPredicted RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 PTPN14Q15678 1187 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 KRBA2Q6ZNG9 492 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 ANKRD18AQ8IVF6 992 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 CCAR2Q8N163 923 aaKnown RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 LINC00116Q8NCU8 138 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 FANCLQ9NW38 375 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 PLEKHA8P1O95397 391 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 FAM182BQ5T319 152 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 E4F1Q66K89 784 aaPredicted RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 TRMT44Q8IYL2 757 aaKnown RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 CCDC112Q8NEF3 446 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 BPIFA3Q9BQP9 254 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 RIOK1Q9BRS2 568 aaKnown RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
TCTN3-201ENST00000265993 TFCP2L1Q9NZI6 479 aa12.51□□□□□ -0.41
TCTN3-201ENST00000265993 SMTNL1A8MU46 457 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 SERPINC1P01008 464 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 GNAT2P19087 354 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 CASP1P29466 404 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 CBX1P83916 185 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.41
TCTN3-201ENST00000265993 NYAP1Q6ZVC0 841 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 CDC5LQ99459 802 aaKnown RBP12.5□□□□□ -0.41
TCTN3-201ENST00000265993 OSBPL5Q9H0X9 879 aaPredicted RBP12.5□□□□□ -0.41
TCTN3-201ENST00000265993 SERTAD1Q9UHV2 236 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 MINPP1Q9UNW1 487 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 CACNA1SQ13698 1873 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 STK36Q9NRP7 1315 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 CUTAO60888 179 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 SFPQP23246 707 aaKnown RBP eCLIP12.5□□□□□ -0.41
TCTN3-201ENST00000265993 SEC23AQ15436 765 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
TCTN3-201ENST00000265993 CFAP100Q494V2 611 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 PDCL2Q8N4E4 241 aa12.5□□□□□ -0.41
TCTN3-201ENST00000265993 FAM84BQ96KN1 310 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms